RNA–Protein interactions for RNA: ENST00000533961.1

RDX-215, Transcript of radixin, humanhuman

TSL 2

Gene RDX, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-215ENST00000533961 TMEM215Q68D42 235 aa1.22□□□□□ -2.21
RDX-215ENST00000533961 TMPPEQ6ZT21 453 aa1.22□□□□□ -2.21
RDX-215ENST00000533961 COPS6Q7L5N1 327 aa1.22□□□□□ -2.21
RDX-215ENST00000533961 CD302Q8IX05 232 aa1.22□□□□□ -2.21
RDX-215ENST00000533961 SYCE1Q8N0S2 351 aa1.22□□□□□ -2.21
RDX-215ENST00000533961 SYS1Q8N2H4 156 aa1.22□□□□□ -2.21
RDX-215ENST00000533961 TCAIMQ8N3R3 496 aa1.22□□□□□ -2.21
RDX-215ENST00000533961 Q8NDZ9 215 aa1.22□□□□□ -2.21
RDX-215ENST00000533961 ZNF738Q8NE65 137 aa1.22□□□□□ -2.21
RDX-215ENST00000533961 OR6N2Q8NGY6 317 aa1.22□□□□□ -2.21
RDX-215ENST00000533961 OR2V1Q8NHB1 315 aa1.22□□□□□ -2.21
RDX-215ENST00000533961 ANGPTL6Q8NI99 470 aa1.22□□□□□ -2.21
RDX-215ENST00000533961 LRRC20Q8TCA0 184 aa1.22□□□□□ -2.21
RDX-215ENST00000533961 DOK4Q8TEW6 326 aa1.22□□□□□ -2.21
RDX-215ENST00000533961 CDKL2Q92772 493 aa1.22□□□□□ -2.21
RDX-215ENST00000533961 ZMYND19Q96E35 227 aaPredicted RBP1.22□□□□□ -2.21
RDX-215ENST00000533961 C8orf76Q96K31 380 aa1.22□□□□□ -2.21
RDX-215ENST00000533961 OLFM3Q96PB7 478 aa1.22□□□□□ -2.21
RDX-215ENST00000533961 TRNT1Q96Q11 434 aaKnown RBP1.22□□□□□ -2.21
RDX-215ENST00000533961 ARL6Q9H0F7 186 aa1.22□□□□□ -2.21
RDX-215ENST00000533961 PRORYQ9H606 182 aa1.22□□□□□ -2.21
RDX-215ENST00000533961 ZNF286AQ9HBT8 521 aa1.22□□□□□ -2.21
RDX-215ENST00000533961 SPACA1Q9HBV2 294 aa1.22□□□□□ -2.21
RDX-215ENST00000533961 VCX3AQ9NNX9 186 aa1.22□□□□□ -2.21
RDX-215ENST00000533961 TREM1Q9NP99 234 aa1.22□□□□□ -2.21
RDX-215ENST00000533961 CHMP5Q9NZZ3 219 aa1.22□□□□□ -2.21
RDX-215ENST00000533961 CD300AQ9UGN4 299 aa1.22□□□□□ -2.21
RDX-215ENST00000533961 POMPQ9Y244 141 aa1.22□□□□□ -2.21
RDX-215ENST00000533961 TBL2Q9Y4P3 447 aaKnown RBP1.22□□□□□ -2.21
RDX-215ENST00000533961 PHLDA3Q9Y5J5 127 aa1.22□□□□□ -2.21
RDX-215ENST00000533961 SHANK3Q9BYB0 1731 aa1.22□□□□□ -2.21
RDX-215ENST00000533961 NUP205Q92621 2012 aa1.22□□□□□ -2.21
RDX-215ENST00000533961 VWDEQ8N2E2 1590 aa1.21□□□□□ -2.22
RDX-215ENST00000533961 MIA3Q5JRA6 1907 aa1.21□□□□□ -2.22
RDX-215ENST00000533961 AQRO60306 1485 aaKnown RBP eCLIP1.21□□□□□ -2.22
RDX-215ENST00000533961 IGHV1-45A0A0A0MS14 117 aa1.21□□□□□ -2.22
RDX-215ENST00000533961 ERICH2A1L162 156 aa1.21□□□□□ -2.22
RDX-215ENST00000533961 VPS37CA5D8V6 355 aaPredicted RBP1.21□□□□□ -2.22
RDX-215ENST00000533961 C17orf98A8MV24 154 aa1.21□□□□□ -2.22
RDX-215ENST00000533961 E7EWF7 191 aa1.21□□□□□ -2.22
RDX-215ENST00000533961 hCG_2039718K7EN88 272 aa1.21□□□□□ -2.22
RDX-215ENST00000533961 SHOX2O60902 331 aaPredicted RBP1.21□□□□□ -2.22
RDX-215ENST00000533961 POP7O75817 140 aaKnown RBP1.21□□□□□ -2.22
RDX-215ENST00000533961 GPR75O95800 540 aa1.21□□□□□ -2.22
RDX-215ENST00000533961 PDYNP01213 254 aa1.21□□□□□ -2.22
RDX-215ENST00000533961 IGKV1-16P04430 117 aa1.21□□□□□ -2.22
RDX-215ENST00000533961 GIMD1P0DJR0 217 aa1.21□□□□□ -2.22
RDX-215ENST00000533961 CCNOP22674 350 aa1.21□□□□□ -2.22
RDX-215ENST00000533961 CNTFRP26992 372 aa1.21□□□□□ -2.22
RDX-215ENST00000533961 GCLMP48507 274 aa1.21□□□□□ -2.22
RDX-215ENST00000533961 UBE2IP63279 158 aaKnown RBP1.21□□□□□ -2.22
RDX-215ENST00000533961 DEFB103AP81534 67 aa1.21□□□□□ -2.22
RDX-215ENST00000533961 PRDX1Q06830 199 aaKnown RBP1.21□□□□□ -2.22
RDX-215ENST00000533961 TSPAN31Q12999 210 aa1.21□□□□□ -2.22
RDX-215ENST00000533961 C18orf21Q32NC0 220 aaPredicted RBP1.21□□□□□ -2.22
RDX-215ENST00000533961 PCOTHQ58A44 107 aa1.21□□□□□ -2.22
RDX-215ENST00000533961 CLEC12AQ5QGZ9 265 aa1.21□□□□□ -2.22
RDX-215ENST00000533961 CLEC20AQ6ZU45 233 aa1.21□□□□□ -2.22
RDX-215ENST00000533961 C17orf78Q8N4C9 275 aa1.21□□□□□ -2.22
RDX-215ENST00000533961 ZIC4Q8N9L1 334 aa1.21□□□□□ -2.22
RDX-215ENST00000533961 OR51Q1Q8NH59 317 aa1.21□□□□□ -2.22
RDX-215ENST00000533961 PDCD6IPQ8WUM4 868 aaKnown RBP1.21□□□□□ -2.22
RDX-215ENST00000533961 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP1.21□□□□□ -2.226e-10■□□□□ 9.9
RDX-215ENST00000533961 B9D2Q9BPU9 175 aa1.21□□□□□ -2.22
RDX-215ENST00000533961 APOL4Q9BPW4 351 aa1.21□□□□□ -2.22
RDX-215ENST00000533961 PAIP2Q9BPZ3 127 aaKnown RBP1.21□□□□□ -2.22
RDX-215ENST00000533961 RAB1BQ9H0U4 201 aa1.21□□□□□ -2.22
RDX-215ENST00000533961 MFSD1Q9H3U5 465 aa1.21□□□□□ -2.22
RDX-215ENST00000533961 METTL17Q9H7H0 456 aaPredicted RBP1.21□□□□□ -2.22
RDX-215ENST00000533961 RMND1Q9NWS8 449 aa1.21□□□□□ -2.22
RDX-215ENST00000533961 C15orf41Q9Y2V0 281 aa1.21□□□□□ -2.22
RDX-215ENST00000533961 FADS3Q9Y5Q0 445 aa1.21□□□□□ -2.22
RDX-215ENST00000533961 HSPE1-MOB4S4R3N1 261 aa1.21□□□□□ -2.22
RDX-215ENST00000533961 KMT2EQ8IZD2 1858 aa1.2□□□□□ -2.22
RDX-215ENST00000533961 NRCAMQ92823 1304 aa1.2□□□□□ -2.22
RDX-215ENST00000533961 IGKV1-12A0A0C4DH73 117 aa1.2□□□□□ -2.22
RDX-215ENST00000533961 PGPA6NDG6 321 aa1.2□□□□□ -2.22
RDX-215ENST00000533961 ARGFXA6NJG6 315 aa1.2□□□□□ -2.22
RDX-215ENST00000533961 KLRC4-KLRK1H3BQV0 150 aa1.2□□□□□ -2.22
RDX-215ENST00000533961 UPK2O00526 184 aa1.2□□□□□ -2.22
RDX-215ENST00000533961 SH2D1AO60880 128 aa1.2□□□□□ -2.22
RDX-215ENST00000533961 SCN2BO60939 215 aa1.2□□□□□ -2.22
RDX-215ENST00000533961 CRTAPO75718 401 aaPredicted RBP1.2□□□□□ -2.22
RDX-215ENST00000533961 ZMPSTE24O75844 475 aa1.2□□□□□ -2.22
RDX-215ENST00000533961 CDK14O94921 469 aa1.2□□□□□ -2.22
RDX-215ENST00000533961 VAPBO95292 243 aa1.2□□□□□ -2.22
RDX-215ENST00000533961 CA2P00918 260 aa1.2□□□□□ -2.22
RDX-215ENST00000533961 IGKV1D-12P01611 117 aa1.2□□□□□ -2.22
RDX-215ENST00000533961 HLA-AP01891 365 aaKnown RBP1.2□□□□□ -2.22
RDX-215ENST00000533961 S100A6P06703 90 aa1.2□□□□□ -2.22
RDX-215ENST00000533961 SPNP16150 400 aa1.2□□□□□ -2.22
RDX-215ENST00000533961 TSPOP30536 169 aa1.2□□□□□ -2.22
RDX-215ENST00000533961 CRATP43155 626 aa1.2□□□□□ -2.22
RDX-215ENST00000533961 AQP5P55064 265 aa1.2□□□□□ -2.22
RDX-215ENST00000533961 RAB38P57729 211 aa1.2□□□□□ -2.22
RDX-215ENST00000533961 RAB2AP61019 212 aa1.2□□□□□ -2.22
RDX-215ENST00000533961 CTAG1AP78358 180 aa1.2□□□□□ -2.22
RDX-215ENST00000533961 FAM229BQ4G0N7 80 aa1.2□□□□□ -2.22
RDX-215ENST00000533961 C10orf91Q5T1B1 145 aa1.2□□□□□ -2.22
RDX-215ENST00000533961 HES3Q5TGS1 186 aa1.2□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms