RNA–Protein interactions for RNA: ENST00000533801.6

ATP2C1-224, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,690 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-224ENST00000533801 TREM2Q9NZC2 230 aa13.6□□□□□ -0.23
ATP2C1-224ENST00000533801 SPTBN1Q01082 2364 aaKnown RBP13.6□□□□□ -0.23
ATP2C1-224ENST00000533801 PROB1E7EW31 1015 aa13.6□□□□□ -0.23
ATP2C1-224ENST00000533801 TIMM8AO60220 97 aaPredicted RBP13.6□□□□□ -0.23
ATP2C1-224ENST00000533801 FGF2P09038 288 aa13.6□□□□□ -0.23
ATP2C1-224ENST00000533801 HLA-GP17693 338 aa13.6□□□□□ -0.23
ATP2C1-224ENST00000533801 EDDM3AQ14507 147 aa13.6□□□□□ -0.23
ATP2C1-224ENST00000533801 TMEM187Q14656 261 aa13.6□□□□□ -0.23
ATP2C1-224ENST00000533801 OR8G1Q15617 311 aa13.6□□□□□ -0.23
ATP2C1-224ENST00000533801 Q6ZRG5 221 aa13.6□□□□□ -0.23
ATP2C1-224ENST00000533801 ZNF573Q86YE8 665 aa13.6□□□□□ -0.23
ATP2C1-224ENST00000533801 CCDC36Q8IYA8 594 aa13.6□□□□□ -0.23
ATP2C1-224ENST00000533801 ASB13Q8WXK3 278 aa13.6□□□□□ -0.23
ATP2C1-224ENST00000533801 ZNF724A8MTY0 619 aa13.6□□□□□ -0.23
ATP2C1-224ENST00000533801 MPPED1O15442 326 aa13.6□□□□□ -0.23
ATP2C1-224ENST00000533801 CD80P33681 288 aa13.6□□□□□ -0.23
ATP2C1-224ENST00000533801 GUCA2BQ16661 112 aa13.6□□□□□ -0.23
ATP2C1-224ENST00000533801 CXorf66Q5JRM2 361 aaPredicted RBP13.6□□□□□ -0.23
ATP2C1-224ENST00000533801 LIAT1Q6ZQX7 453 aa13.6□□□□□ -0.23
ATP2C1-224ENST00000533801 OR10J5Q8NHC4 309 aa13.6□□□□□ -0.23
ATP2C1-224ENST00000533801 NTNG2Q96CW9 530 aa13.6□□□□□ -0.23
ATP2C1-224ENST00000533801 CYTL1Q9NRR1 136 aa13.6□□□□□ -0.23
ATP2C1-224ENST00000533801 AUP1Q9Y679 476 aa13.6□□□□□ -0.23
ATP2C1-224ENST00000533801 FAM74A7A6NL05 159 aa13.59□□□□□ -0.23
ATP2C1-224ENST00000533801 EIF3GO75821 320 aaKnown RBP eCLIP13.59□□□□□ -0.23
ATP2C1-224ENST00000533801 SNAPC5O75971 98 aa13.59□□□□□ -0.23
ATP2C1-224ENST00000533801 MPV17P39210 176 aa13.59□□□□□ -0.23
ATP2C1-224ENST00000533801 FAM74A3Q4VXF1 159 aa13.59□□□□□ -0.23
ATP2C1-224ENST00000533801 BCL2L2Q92843 193 aaPredicted RBP13.59□□□□□ -0.23
ATP2C1-224ENST00000533801 SHARPINQ9H0F6 387 aa13.59□□□□□ -0.23
ATP2C1-224ENST00000533801 ABCD4O14678 606 aa13.59□□□□□ -0.23
ATP2C1-224ENST00000533801 RBMXL2O75526 392 aaKnown RBP13.59□□□□□ -0.23
ATP2C1-224ENST00000533801 C9orf106Q8NAJ2 232 aa13.59□□□□□ -0.23
ATP2C1-224ENST00000533801 OR5P3Q8WZ94 311 aa13.59□□□□□ -0.23
ATP2C1-224ENST00000533801 SH3BGRL3Q9H299 93 aa13.59□□□□□ -0.23
ATP2C1-224ENST00000533801 DEFB108AA8MXU0 73 aa13.59□□□□□ -0.23
ATP2C1-224ENST00000533801 TOR1AO14656 332 aa13.59□□□□□ -0.23
ATP2C1-224ENST00000533801 SERPINE2P07093 398 aa13.59□□□□□ -0.23
ATP2C1-224ENST00000533801 SURF2Q15527 256 aaPredicted RBP13.59□□□□□ -0.23
ATP2C1-224ENST00000533801 IGHV3-43A0A0B4J1X8 118 aa13.58□□□□□ -0.24
ATP2C1-224ENST00000533801 TUBAL3A6NHL2 446 aa13.58□□□□□ -0.24
ATP2C1-224ENST00000533801 ST8SIA3O43173 380 aa13.58□□□□□ -0.24
ATP2C1-224ENST00000533801 IGHV3-43DP0DP04 118 aa13.58□□□□□ -0.24
ATP2C1-224ENST00000533801 PPT1P50897 306 aa13.58□□□□□ -0.24
ATP2C1-224ENST00000533801 HERPUD1Q15011 391 aa13.58□□□□□ -0.24
ATP2C1-224ENST00000533801 CMTM1Q8IZ96 169 aa13.58□□□□□ -0.24
ATP2C1-224ENST00000533801 OR5A2Q8NGI9 324 aa13.58□□□□□ -0.24
ATP2C1-224ENST00000533801 MOB3AQ96BX8 217 aa13.58□□□□□ -0.24
ATP2C1-224ENST00000533801 A8MXK9 166 aa13.58□□□□□ -0.24
ATP2C1-224ENST00000533801 LPAR6P43657 344 aa13.58□□□□□ -0.24
ATP2C1-224ENST00000533801 TMEM211Q6ICI0 200 aa13.58□□□□□ -0.24
ATP2C1-224ENST00000533801 COLCA1Q6ZS62 124 aa13.58□□□□□ -0.24
ATP2C1-224ENST00000533801 GLRX5Q86SX6 157 aa13.58□□□□□ -0.24
ATP2C1-224ENST00000533801 SCCPDHQ8NBX0 429 aa13.58□□□□□ -0.24
ATP2C1-224ENST00000533801 SPSB4Q96A44 273 aa13.58□□□□□ -0.24
ATP2C1-224ENST00000533801 C20orf24Q9BUV8 137 aa13.58□□□□□ -0.24
ATP2C1-224ENST00000533801 FAM234AQ9H0X4 552 aa13.58□□□□□ -0.24
ATP2C1-224ENST00000533801 KLK10O43240 276 aa13.58□□□□□ -0.24
ATP2C1-224ENST00000533801 TMEM182Q6ZP80 229 aaPredicted RBP13.58□□□□□ -0.24
ATP2C1-224ENST00000533801 EIF5A2Q9GZV4 153 aaKnown RBP13.58□□□□□ -0.24
ATP2C1-224ENST00000533801 DLL3Q9NYJ7 618 aa13.58□□□□□ -0.24
ATP2C1-224ENST00000533801 ZNF318Q5VUA4 2279 aa13.58□□□□□ -0.24
ATP2C1-224ENST00000533801 NCOR2Q9Y618 2525 aa13.57□□□□□ -0.24
ATP2C1-224ENST00000533801 MED13LQ71F56 2210 aa13.57□□□□□ -0.24
ATP2C1-224ENST00000533801 HOXD4P09016 255 aaPredicted RBP13.57□□□□□ -0.24
ATP2C1-224ENST00000533801 NKX2-1P43699 371 aaPredicted RBP13.57□□□□□ -0.24
ATP2C1-224ENST00000533801 GABRA2P47869 451 aa13.57□□□□□ -0.24
ATP2C1-224ENST00000533801 CAMLGP49069 296 aa13.57□□□□□ -0.24
ATP2C1-224ENST00000533801 ZNF83P51522 516 aa13.57□□□□□ -0.24
ATP2C1-224ENST00000533801 HSD17B13Q7Z5P4 300 aaPredicted RBP13.57□□□□□ -0.24
ATP2C1-224ENST00000533801 RTL8AQ9BWD3 113 aa13.57□□□□□ -0.24
ATP2C1-224ENST00000533801 Q9N2K0 584 aa13.57□□□□□ -0.24
ATP2C1-224ENST00000533801 SMG1Q96Q15 3661 aaKnown RBP13.57□□□□□ -0.24
ATP2C1-224ENST00000533801 TRAV24A0A0B4J272 114 aa13.57□□□□□ -0.24
ATP2C1-224ENST00000533801 DEDDO75618 318 aa13.57□□□□□ -0.24
ATP2C1-224ENST00000533801 IAPPP10997 89 aa13.57□□□□□ -0.24
ATP2C1-224ENST00000533801 DHRS11Q6UWP2 260 aa13.57□□□□□ -0.24
ATP2C1-224ENST00000533801 FAM214BQ7L5A3 538 aa13.57□□□□□ -0.24
ATP2C1-224ENST00000533801 CBLN2Q8IUK8 224 aa13.57□□□□□ -0.24
ATP2C1-224ENST00000533801 RPRMLQ8N4K4 120 aa13.57□□□□□ -0.24
ATP2C1-224ENST00000533801 STOML3Q8TAV4 291 aa13.57□□□□□ -0.24
ATP2C1-224ENST00000533801 TLE1Q04724 770 aa13.57□□□□□ -0.24
ATP2C1-224ENST00000533801 ZNF154Q13106 437 aa13.57□□□□□ -0.24
ATP2C1-224ENST00000533801 ZNF610Q8N9Z0 462 aa13.57□□□□□ -0.24
ATP2C1-224ENST00000533801 CHD8Q9HCK8 2581 aa13.56□□□□□ -0.24
ATP2C1-224ENST00000533801 IGKV1-6A0A0C4DH72 117 aa13.56□□□□□ -0.24
ATP2C1-224ENST00000533801 PSG7Q13046 419 aa13.56□□□□□ -0.24
ATP2C1-224ENST00000533801 FAM213BQ8TBF2 198 aa13.56□□□□□ -0.24
ATP2C1-224ENST00000533801 DNTTIP1Q9H147 329 aa13.56□□□□□ -0.24
ATP2C1-224ENST00000533801 OR2H2O95918 312 aa13.56□□□□□ -0.24
ATP2C1-224ENST00000533801 ECI1P42126 302 aa13.56□□□□□ -0.24
ATP2C1-224ENST00000533801 DAZAP2Q15038 168 aaPredicted RBP13.56□□□□□ -0.24
ATP2C1-224ENST00000533801 OR10V1Q8NGI7 309 aa13.56□□□□□ -0.24
ATP2C1-224ENST00000533801 RBMXL1Q96E39 390 aaKnown RBP13.56□□□□□ -0.24
ATP2C1-224ENST00000533801 PIGMQ9H3S5 423 aa13.56□□□□□ -0.24
ATP2C1-224ENST00000533801 RRP8O43159 456 aaKnown RBP13.55□□□□□ -0.24
ATP2C1-224ENST00000533801 SMPD2O60906 423 aa13.55□□□□□ -0.24
ATP2C1-224ENST00000533801 GLAP06280 429 aa13.55□□□□□ -0.24
ATP2C1-224ENST00000533801 AESQ08117 197 aa13.55□□□□□ -0.24
ATP2C1-224ENST00000533801 GMPPAQ96IJ6 420 aaPredicted RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms