RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 TMEM133Q9H2Q1 129 aa4.42□□□□□ -1.7
HMGB1P40-201ENST00000525121 ZNF696Q9H7X3 374 aa4.42□□□□□ -1.7
HMGB1P40-201ENST00000525121 CHMP1AQ9HD42 196 aaPredicted RBP4.42□□□□□ -1.7
HMGB1P40-201ENST00000525121 ABCB10Q9NRK6 738 aa4.42□□□□□ -1.7
HMGB1P40-201ENST00000525121 CALYQ9NYX4 217 aa4.42□□□□□ -1.7
HMGB1P40-201ENST00000525121 STEAP1Q9UHE8 339 aa4.42□□□□□ -1.7
HMGB1P40-201ENST00000525121 TRAPPC2LQ9UL33 140 aa4.42□□□□□ -1.7
HMGB1P40-201ENST00000525121 TBL2Q9Y4P3 447 aaKnown RBP4.42□□□□□ -1.7
HMGB1P40-201ENST00000525121 AMMECR1Q9Y4X0 333 aaPredicted RBP4.42□□□□□ -1.7
HMGB1P40-201ENST00000525121 POMT1Q9Y6A1 747 aa4.42□□□□□ -1.7
HMGB1P40-201ENST00000525121 MAP1AP78559 2803 aaPredicted RBP4.42□□□□□ -1.7
HMGB1P40-201ENST00000525121 TLN2Q9Y4G6 2542 aa4.42□□□□□ -1.7
HMGB1P40-201ENST00000525121 C2CD3Q4AC94 2353 aa4.42□□□□□ -1.7
HMGB1P40-201ENST00000525121 IGHV2-26A0A0B4J1V2 119 aa4.41□□□□□ -1.7
HMGB1P40-201ENST00000525121 KBTBD11-OT1A0A1B0GTJ5 212 aa4.41□□□□□ -1.7
HMGB1P40-201ENST00000525121 MDFIC2A0A1B0GVS7 189 aa4.41□□□□□ -1.7
HMGB1P40-201ENST00000525121 UBE2QL1A1L167 161 aa4.41□□□□□ -1.7
HMGB1P40-201ENST00000525121 METTL21EPA6NDL7 271 aa4.41□□□□□ -1.7
HMGB1P40-201ENST00000525121 IFITM5A6NNB3 132 aa4.41□□□□□ -1.7
HMGB1P40-201ENST00000525121 NOTOA8MTQ0 251 aa4.41□□□□□ -1.7
HMGB1P40-201ENST00000525121 F2RL2O00254 374 aa4.41□□□□□ -1.7
HMGB1P40-201ENST00000525121 SCGNO76038 276 aa4.41□□□□□ -1.7
HMGB1P40-201ENST00000525121 IL1AP01583 271 aa4.41□□□□□ -1.7
HMGB1P40-201ENST00000525121 LPLP06858 475 aa4.41□□□□□ -1.7
HMGB1P40-201ENST00000525121 RNASE1P07998 156 aaKnown RBP4.41□□□□□ -1.7
HMGB1P40-201ENST00000525121 MELTFP08582 738 aa4.41□□□□□ -1.7
HMGB1P40-201ENST00000525121 VSIG8P0DPA2 414 aa4.41□□□□□ -1.7
HMGB1P40-201ENST00000525121 HTR1DP28221 377 aa4.41□□□□□ -1.7
HMGB1P40-201ENST00000525121 BLVRBP30043 206 aaPredicted RBP4.41□□□□□ -1.7
HMGB1P40-201ENST00000525121 GP2P55259 537 aaKnown RBP4.41□□□□□ -1.7
HMGB1P40-201ENST00000525121 DLX6P56179 175 aa4.41□□□□□ -1.7
HMGB1P40-201ENST00000525121 ARL6IP1Q15041 203 aa4.41□□□□□ -1.7
HMGB1P40-201ENST00000525121 LTC4SQ16873 150 aa4.41□□□□□ -1.7
HMGB1P40-201ENST00000525121 LRRC75BQ2VPJ9 315 aa4.41□□□□□ -1.7
HMGB1P40-201ENST00000525121 KRTAP24-1Q3LI83 254 aa4.41□□□□□ -1.7
HMGB1P40-201ENST00000525121 MINOS1Q5TGZ0 78 aa4.41□□□□□ -1.7
HMGB1P40-201ENST00000525121 RSBN1Q5VWQ0 802 aaPredicted RBP4.41□□□□□ -1.7
HMGB1P40-201ENST00000525121 ZNF626Q68DY1 528 aa4.41□□□□□ -1.7
HMGB1P40-201ENST00000525121 Q6YL49 198 aa4.41□□□□□ -1.7
HMGB1P40-201ENST00000525121 ZNF497Q6ZNH5 498 aa4.41□□□□□ -1.7
HMGB1P40-201ENST00000525121 GDPGP1Q6ZNW5 385 aa4.41□□□□□ -1.7
HMGB1P40-201ENST00000525121 MOB1BQ7L9L4 216 aa4.41□□□□□ -1.7
HMGB1P40-201ENST00000525121 TCF23Q7RTU1 214 aa4.41□□□□□ -1.7
HMGB1P40-201ENST00000525121 LDLRAD3Q86YD5 345 aa4.41□□□□□ -1.7
HMGB1P40-201ENST00000525121 ABHD12Q8N2K0 398 aa4.41□□□□□ -1.7
HMGB1P40-201ENST00000525121 PIP4P2Q8N4L2 257 aa4.41□□□□□ -1.7
HMGB1P40-201ENST00000525121 TMEM104Q8NE00 496 aa4.41□□□□□ -1.7
HMGB1P40-201ENST00000525121 OR11H6Q8NGC7 330 aa4.41□□□□□ -1.7
HMGB1P40-201ENST00000525121 OR10A7Q8NGE5 316 aa4.41□□□□□ -1.7
HMGB1P40-201ENST00000525121 OR51D1Q8NGF3 324 aa4.41□□□□□ -1.7
HMGB1P40-201ENST00000525121 OR56B1Q8NGI3 324 aa4.41□□□□□ -1.7
HMGB1P40-201ENST00000525121 PLPPR1Q8TBJ4 325 aa4.41□□□□□ -1.7
HMGB1P40-201ENST00000525121 MRGPRDQ8TDS7 321 aa4.41□□□□□ -1.7
HMGB1P40-201ENST00000525121 CCDC107Q8WV48 283 aa4.41□□□□□ -1.7
HMGB1P40-201ENST00000525121 CAPSLQ8WWF8 208 aa4.41□□□□□ -1.7
HMGB1P40-201ENST00000525121 GCDHQ92947 438 aaPredicted RBP4.41□□□□□ -1.7
HMGB1P40-201ENST00000525121 TNFRSF14Q92956 283 aa4.41□□□□□ -1.7
HMGB1P40-201ENST00000525121 ARL11Q969Q4 196 aa4.41□□□□□ -1.7
HMGB1P40-201ENST00000525121 PHF21AQ96BD5 680 aa4.41□□□□□ -1.7
HMGB1P40-201ENST00000525121 FAM3DQ96BQ1 224 aa4.41□□□□□ -1.7
HMGB1P40-201ENST00000525121 C1orf147Q96MC9 270 aaPredicted RBP4.41□□□□□ -1.7
HMGB1P40-201ENST00000525121 DUX5Q96PT3 197 aa4.41□□□□□ -1.7
HMGB1P40-201ENST00000525121 TM2D1Q9BX74 207 aa4.41□□□□□ -1.7
HMGB1P40-201ENST00000525121 RAB18Q9NP72 206 aa4.41□□□□□ -1.7
HMGB1P40-201ENST00000525121 TNFRSF19Q9NS68 423 aa4.41□□□□□ -1.7
HMGB1P40-201ENST00000525121 PLEKHJ1Q9NW61 149 aa4.41□□□□□ -1.7
HMGB1P40-201ENST00000525121 TXNL4BQ9NX01 149 aaKnown RBP4.41□□□□□ -1.7
HMGB1P40-201ENST00000525121 IDI2-AS1Q9NZ38 188 aa4.41□□□□□ -1.7
HMGB1P40-201ENST00000525121 ABRACLQ9P1F3 81 aa4.41□□□□□ -1.7
HMGB1P40-201ENST00000525121 RCC2Q9P258 522 aaKnown RBP4.41□□□□□ -1.7
HMGB1P40-201ENST00000525121 RAB22AQ9UL26 194 aa4.41□□□□□ -1.7
HMGB1P40-201ENST00000525121 MGAT4AQ9UM21 535 aa4.41□□□□□ -1.7
HMGB1P40-201ENST00000525121 MINOS1-NBL1R4GNA1 71 aa4.41□□□□□ -1.7
HMGB1P40-201ENST00000525121 MALRD1Q5VYJ5 2156 aa4.41□□□□□ -1.7
HMGB1P40-201ENST00000525121 NAV3Q8IVL0 2385 aa4.41□□□□□ -1.7
HMGB1P40-201ENST00000525121 SONP18583 2426 aaKnown RBP4.41□□□□□ -1.7
HMGB1P40-201ENST00000525121 ZNF469Q96JG9 3925 aaPredicted RBP4.4□□□□□ -1.7
HMGB1P40-201ENST00000525121 TMEM14DPA8MWL7 114 aa4.4□□□□□ -1.71
HMGB1P40-201ENST00000525121 ODF3BA8MYP8 253 aa4.4□□□□□ -1.71
HMGB1P40-201ENST00000525121 LEUTXA8MZ59 168 aa4.4□□□□□ -1.71
HMGB1P40-201ENST00000525121 SDCBPO00560 298 aaPredicted RBP4.4□□□□□ -1.71
HMGB1P40-201ENST00000525121 ORC5O43913 435 aa4.4□□□□□ -1.71
HMGB1P40-201ENST00000525121 AIREO43918 545 aa4.4□□□□□ -1.71
HMGB1P40-201ENST00000525121 NOL3O60936 208 aaKnown RBP4.4□□□□□ -1.71
HMGB1P40-201ENST00000525121 TMEM127O75204 238 aa4.4□□□□□ -1.71
HMGB1P40-201ENST00000525121 RGS11O94810 467 aa4.4□□□□□ -1.71
HMGB1P40-201ENST00000525121 MT-ND4P03905 459 aa4.4□□□□□ -1.71
HMGB1P40-201ENST00000525121 RAB6AP20340 208 aa4.4□□□□□ -1.71
HMGB1P40-201ENST00000525121 OMGP23515 440 aa4.4□□□□□ -1.71
HMGB1P40-201ENST00000525121 IL3RAP26951 378 aa4.4□□□□□ -1.71
HMGB1P40-201ENST00000525121 CFPP27918 469 aa4.4□□□□□ -1.71
HMGB1P40-201ENST00000525121 CHATP28329 748 aa4.4□□□□□ -1.71
HMGB1P40-201ENST00000525121 CD34P28906 385 aa4.4□□□□□ -1.71
HMGB1P40-201ENST00000525121 BRS3P32247 399 aa4.4□□□□□ -1.71
HMGB1P40-201ENST00000525121 SSTR5P35346 364 aa4.4□□□□□ -1.71
HMGB1P40-201ENST00000525121 MNDAP41218 407 aa4.4□□□□□ -1.71
HMGB1P40-201ENST00000525121 DLX1P56177 255 aa4.4□□□□□ -1.71
HMGB1P40-201ENST00000525121 CLDN12P56749 244 aa4.4□□□□□ -1.71
HMGB1P40-201ENST00000525121 OR10A3P58181 314 aa4.4□□□□□ -1.71
HMGB1P40-201ENST00000525121 RPL15P61313 204 aaKnown RBP4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms