RNA–Protein interactions for RNA: ENST00000517403.5

PABPC1-202, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-202ENST00000517403 TRAPPC6BQ86SZ2 158 aa6.83□□□□□ -1.32
PABPC1-202ENST00000517403 ZNF329Q86UD4 541 aa6.83□□□□□ -1.32
PABPC1-202ENST00000517403 PARP16Q8N5Y8 322 aa6.83□□□□□ -1.32
PABPC1-202ENST00000517403 ACBD7Q8N6N7 88 aa6.83□□□□□ -1.32
PABPC1-202ENST00000517403 LINC00482Q8N8I6 264 aa6.83□□□□□ -1.32
PABPC1-202ENST00000517403 ZFP41Q8N8Y5 198 aa6.83□□□□□ -1.32
PABPC1-202ENST00000517403 OR51T1Q8NGJ9 327 aa6.83□□□□□ -1.32
PABPC1-202ENST00000517403 OR56B4Q8NH76 319 aa6.83□□□□□ -1.32
PABPC1-202ENST00000517403 RHOXF1Q8NHV9 184 aa6.83□□□□□ -1.32
PABPC1-202ENST00000517403 RFESDQ8TAC1 157 aa6.83□□□□□ -1.32
PABPC1-202ENST00000517403 CNIH3Q8TBE1 160 aa6.83□□□□□ -1.32
PABPC1-202ENST00000517403 MRAPQ8TCY5 172 aa6.83□□□□□ -1.32
PABPC1-202ENST00000517403 MRGPRDQ8TDS7 321 aa6.83□□□□□ -1.32
PABPC1-202ENST00000517403 SPSB1Q96BD6 273 aa6.83□□□□□ -1.32
PABPC1-202ENST00000517403 C10orf35Q96D05 121 aa6.83□□□□□ -1.32
PABPC1-202ENST00000517403 RBM14Q96PK6 669 aaKnown RBP6.83□□□□□ -1.32
PABPC1-202ENST00000517403 PRSS22Q9GZN4 317 aa6.83□□□□□ -1.32
PABPC1-202ENST00000517403 ZCCHC4Q9H5U6 513 aa6.83□□□□□ -1.32
PABPC1-202ENST00000517403 CALYQ9NYX4 217 aa6.83□□□□□ -1.32
PABPC1-202ENST00000517403 DPM3Q9P2X0 92 aa6.83□□□□□ -1.32
PABPC1-202ENST00000517403 CLEC2DQ9UHP7 191 aa6.83□□□□□ -1.32
PABPC1-202ENST00000517403 IGHV3-72A0A0B4J1Y9 119 aa6.82□□□□□ -1.32
PABPC1-202ENST00000517403 NPIPB11E5RHQ5 1161 aa6.82□□□□□ -1.32
PABPC1-202ENST00000517403 C15orf65H3BRN8 121 aa6.82□□□□□ -1.32
PABPC1-202ENST00000517403 SULT1B1O43704 296 aa6.82□□□□□ -1.32
PABPC1-202ENST00000517403 OR2F2O95006 317 aa6.82□□□□□ -1.32
PABPC1-202ENST00000517403 FCGR1AP12314 374 aa6.82□□□□□ -1.32
PABPC1-202ENST00000517403 PRKACBP22694 351 aa6.82□□□□□ -1.32
PABPC1-202ENST00000517403 REG1BP48304 166 aa6.82□□□□□ -1.32
PABPC1-202ENST00000517403 CDC42P60953 191 aa6.82□□□□□ -1.32
PABPC1-202ENST00000517403 RBM39Q14498 530 aaKnown RBP6.82□□□□□ -1.32
PABPC1-202ENST00000517403 INSL4Q14641 139 aa6.82□□□□□ -1.32
PABPC1-202ENST00000517403 KRBOX4Q5JUW0 171 aa6.82□□□□□ -1.32
PABPC1-202ENST00000517403 C11orf88Q6PI97 169 aa6.82□□□□□ -1.32
PABPC1-202ENST00000517403 ASCL4Q6XD76 172 aa6.82□□□□□ -1.32
PABPC1-202ENST00000517403 LYPD6Q86Y78 171 aa6.82□□□□□ -1.32
PABPC1-202ENST00000517403 Q8IYB0 196 aa6.82□□□□□ -1.32
PABPC1-202ENST00000517403 SAXO1Q8IYX7 474 aa6.82□□□□□ -1.32
PABPC1-202ENST00000517403 SYS1Q8N2H4 156 aa6.82□□□□□ -1.32
PABPC1-202ENST00000517403 DRAM1Q8N682 238 aa6.82□□□□□ -1.32
PABPC1-202ENST00000517403 C5orf56Q8N8D9 126 aa6.82□□□□□ -1.32
PABPC1-202ENST00000517403 WFDC9Q8NEX5 89 aa6.82□□□□□ -1.32
PABPC1-202ENST00000517403 Q8NFD4 153 aa6.82□□□□□ -1.32
PABPC1-202ENST00000517403 NR1H4Q96RI1 486 aaPredicted RBP6.82□□□□□ -1.32
PABPC1-202ENST00000517403 LINC00574Q9H8X3 128 aa6.82□□□□□ -1.32
PABPC1-202ENST00000517403 RAB18Q9NP72 206 aa6.82□□□□□ -1.32
PABPC1-202ENST00000517403 ABCB10Q9NRK6 738 aa6.82□□□□□ -1.32
PABPC1-202ENST00000517403 IMPAD1Q9NX62 359 aa6.82□□□□□ -1.32
PABPC1-202ENST00000517403 TAS2R3Q9NYW6 316 aa6.82□□□□□ -1.32
PABPC1-202ENST00000517403 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.82□□□□□ -1.32
PABPC1-202ENST00000517403 PSG11Q9UQ72 335 aa6.82□□□□□ -1.32
PABPC1-202ENST00000517403 TRGV10A0A0A0MS01 117 aa6.81□□□□□ -1.32
PABPC1-202ENST00000517403 IGHV3-43A0A0B4J1X8 118 aa6.81□□□□□ -1.32
PABPC1-202ENST00000517403 KBTBD11-OT1A0A1B0GTJ5 212 aa6.81□□□□□ -1.32
PABPC1-202ENST00000517403 A0A1W2PPH5 198 aa6.81□□□□□ -1.32
PABPC1-202ENST00000517403 TUSC2O75896 110 aa6.81□□□□□ -1.32
PABPC1-202ENST00000517403 MPIG6BO95866 241 aa6.81□□□□□ -1.32
PABPC1-202ENST00000517403 IL1AP01583 271 aa6.81□□□□□ -1.32
PABPC1-202ENST00000517403 CCDC159P0C7I6 412 aa6.81□□□□□ -1.32
PABPC1-202ENST00000517403 IGHV3-43DP0DP04 118 aa6.81□□□□□ -1.32
PABPC1-202ENST00000517403 TMEM225BP0DP42 221 aa6.81□□□□□ -1.32
PABPC1-202ENST00000517403 NFYBP25208 207 aa6.81□□□□□ -1.32
PABPC1-202ENST00000517403 ATP6V1E1P36543 226 aa6.81□□□□□ -1.32
PABPC1-202ENST00000517403 VHLP40337 213 aa6.81□□□□□ -1.32
PABPC1-202ENST00000517403 PTGFRP43088 359 aa6.81□□□□□ -1.32
PABPC1-202ENST00000517403 ELP2Q6IA86 826 aa6.81□□□□□ -1.32
PABPC1-202ENST00000517403 Q8N6K4 173 aa6.81□□□□□ -1.32
PABPC1-202ENST00000517403 TMEM104Q8NE00 496 aa6.81□□□□□ -1.32
PABPC1-202ENST00000517403 SGCDQ92629 289 aa6.81□□□□□ -1.32
PABPC1-202ENST00000517403 RFKQ969G6 155 aa6.81□□□□□ -1.32
PABPC1-202ENST00000517403 PGLYRP3Q96LB9 341 aa6.81□□□□□ -1.32
PABPC1-202ENST00000517403 HSPB9Q9BQS6 159 aa6.81□□□□□ -1.32
PABPC1-202ENST00000517403 ADI1Q9BV57 179 aa6.81□□□□□ -1.32
PABPC1-202ENST00000517403 KCNK15Q9H427 330 aa6.81□□□□□ -1.32
PABPC1-202ENST00000517403 NEK6Q9HC98 313 aa6.81□□□□□ -1.32
PABPC1-202ENST00000517403 MRPS18AQ9NVS2 196 aaKnown RBP6.81□□□□□ -1.32
PABPC1-202ENST00000517403 NECAP2Q9NVZ3 263 aa6.81□□□□□ -1.32
PABPC1-202ENST00000517403 FAM118AQ9NWS6 357 aa6.81□□□□□ -1.32
PABPC1-202ENST00000517403 ZNF281Q9Y2X9 895 aa6.81□□□□□ -1.32
PABPC1-202ENST00000517403 GMPPBQ9Y5P6 360 aa6.81□□□□□ -1.32
PABPC1-202ENST00000517403 TRBV5-5A0A0J9YX44 114 aa6.8□□□□□ -1.32
PABPC1-202ENST00000517403 hCG_1809904A0A1W2PP81 198 aa6.8□□□□□ -1.32
PABPC1-202ENST00000517403 A0A1W2PPE2 198 aa6.8□□□□□ -1.32
PABPC1-202ENST00000517403 A0A1W2PR64 198 aa6.8□□□□□ -1.32
PABPC1-202ENST00000517403 A0A1W2PRV1 198 aa6.8□□□□□ -1.32
PABPC1-202ENST00000517403 ZNF729A6NN14 1252 aaPredicted RBP6.8□□□□□ -1.32
PABPC1-202ENST00000517403 J3QR06 171 aa6.8□□□□□ -1.32
PABPC1-202ENST00000517403 SH2D1BO14796 132 aa6.8□□□□□ -1.32
PABPC1-202ENST00000517403 GEMIN2O14893 280 aaKnown RBP6.8□□□□□ -1.32
PABPC1-202ENST00000517403 CYB5AP00167 134 aa6.8□□□□□ -1.32
PABPC1-202ENST00000517403 HCKP08631 526 aa6.8□□□□□ -1.32
PABPC1-202ENST00000517403 IGFBP3P17936 291 aaPredicted RBP6.8□□□□□ -1.32
PABPC1-202ENST00000517403 GP2P55259 537 aaKnown RBP6.8□□□□□ -1.32
PABPC1-202ENST00000517403 RBM11P57052 281 aaKnown RBP6.8□□□□□ -1.32
PABPC1-202ENST00000517403 LOXL3P58215 753 aa6.8□□□□□ -1.32
PABPC1-202ENST00000517403 GNMTQ14749 295 aa6.8□□□□□ -1.32
PABPC1-202ENST00000517403 DEFB136Q30KP8 78 aa6.8□□□□□ -1.32
PABPC1-202ENST00000517403 PAN3Q58A45 887 aaKnown RBP6.8□□□□□ -1.32
PABPC1-202ENST00000517403 SIGIRRQ6IA17 410 aa6.8□□□□□ -1.32
PABPC1-202ENST00000517403 SVOPQ8N4V2 548 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms