RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 RSPO3Q9BXY4 272 aaPredicted RBP3.06□□□□□ -1.92
HMGB1P47-201ENST00000511281 SLC19A3Q9BZV2 496 aa3.06□□□□□ -1.92
HMGB1P47-201ENST00000511281 NKIRAS1Q9NYS0 192 aa3.06□□□□□ -1.92
HMGB1P47-201ENST00000511281 MARCOQ9UEW3 520 aaPredicted RBP3.06□□□□□ -1.92
HMGB1P47-201ENST00000511281 TICRRQ7Z2Z1 1910 aa3.05□□□□□ -1.92
HMGB1P47-201ENST00000511281 ARAP3Q8WWN8 1544 aa3.05□□□□□ -1.92
HMGB1P47-201ENST00000511281 IGHV1-45A0A0A0MS14 117 aa3.05□□□□□ -1.92
HMGB1P47-201ENST00000511281 ISLRO14498 428 aa3.05□□□□□ -1.92
HMGB1P47-201ENST00000511281 RGS5O15539 181 aa3.05□□□□□ -1.92
HMGB1P47-201ENST00000511281 NIPSNAP2O75323 286 aa3.05□□□□□ -1.92
HMGB1P47-201ENST00000511281 POP7O75817 140 aaKnown RBP3.05□□□□□ -1.92
HMGB1P47-201ENST00000511281 NRASP01111 189 aa3.05□□□□□ -1.92
HMGB1P47-201ENST00000511281 HRASP01112 189 aa3.05□□□□□ -1.92
HMGB1P47-201ENST00000511281 KRASP01116 189 aa3.05□□□□□ -1.92
HMGB1P47-201ENST00000511281 HLA-DMAP28067 261 aa3.05□□□□□ -1.92
HMGB1P47-201ENST00000511281 UBE2IP63279 158 aaKnown RBP3.05□□□□□ -1.92
HMGB1P47-201ENST00000511281 TBC1D28Q2M2D7 210 aa3.05□□□□□ -1.92
HMGB1P47-201ENST00000511281 TMEM69Q5SWH9 247 aa3.05□□□□□ -1.92
HMGB1P47-201ENST00000511281 RPRMLQ8N4K4 120 aa3.05□□□□□ -1.92
HMGB1P47-201ENST00000511281 PYURFQ96I23 114 aa3.05□□□□□ -1.92
HMGB1P47-201ENST00000511281 SCRT1Q9BWW7 348 aa3.05□□□□□ -1.92
HMGB1P47-201ENST00000511281 SPANXB1Q9NS25 103 aaPredicted RBP3.05□□□□□ -1.92
HMGB1P47-201ENST00000511281 DMAC2Q9NW81 257 aa3.05□□□□□ -1.92
HMGB1P47-201ENST00000511281 NAGKQ9UJ70 344 aa3.05□□□□□ -1.92
HMGB1P47-201ENST00000511281 POMPQ9Y244 141 aa3.05□□□□□ -1.92
HMGB1P47-201ENST00000511281 TP53TG1Q9Y2A0 90 aa3.05□□□□□ -1.92
HMGB1P47-201ENST00000511281 MTCH2Q9Y6C9 303 aa3.05□□□□□ -1.92
HMGB1P47-201ENST00000511281 IGHV3-21A0A0B4J1V1 117 aa3.04□□□□□ -1.92
HMGB1P47-201ENST00000511281 SPRR5A0A1B0GTR4 108 aa3.04□□□□□ -1.92
HMGB1P47-201ENST00000511281 A0A1W2PNU3 283 aaPredicted RBP3.04□□□□□ -1.92
HMGB1P47-201ENST00000511281 HPGDSO60760 199 aa3.04□□□□□ -1.92
HMGB1P47-201ENST00000511281 CELP19835 753 aa3.04□□□□□ -1.92
HMGB1P47-201ENST00000511281 INPP1P49441 399 aa3.04□□□□□ -1.92
HMGB1P47-201ENST00000511281 PSMD7P51665 324 aa3.04□□□□□ -1.92
HMGB1P47-201ENST00000511281 GTF2BQ00403 316 aa3.04□□□□□ -1.92
HMGB1P47-201ENST00000511281 MMDQ15546 238 aa3.04□□□□□ -1.92
HMGB1P47-201ENST00000511281 FAM131AQ6UXB0 335 aa3.04□□□□□ -1.92
HMGB1P47-201ENST00000511281 OLIG3Q7RTU3 272 aa3.04□□□□□ -1.92
HMGB1P47-201ENST00000511281 TMEM144Q7Z5S9 345 aa3.04□□□□□ -1.92
HMGB1P47-201ENST00000511281 ZFP82Q8N141 532 aa3.04□□□□□ -1.92
HMGB1P47-201ENST00000511281 C3orf22Q8N5N4 141 aa3.04□□□□□ -1.92
HMGB1P47-201ENST00000511281 SMIM12Q96EX1 92 aa3.04□□□□□ -1.92
HMGB1P47-201ENST00000511281 RBP7Q96R05 134 aa3.04□□□□□ -1.92
HMGB1P47-201ENST00000511281 FBXL15Q9H469 300 aa3.04□□□□□ -1.92
HMGB1P47-201ENST00000511281 UBQLN4Q9NRR5 601 aa3.04□□□□□ -1.92
HMGB1P47-201ENST00000511281 PLEKHJ1Q9NW61 149 aa3.04□□□□□ -1.92
HMGB1P47-201ENST00000511281 SCN4AP35499 1836 aa3.03□□□□□ -1.92
HMGB1P47-201ENST00000511281 COCHO43405 550 aa3.03□□□□□ -1.92
HMGB1P47-201ENST00000511281 ATP8B1O43520 1251 aa3.03□□□□□ -1.92
HMGB1P47-201ENST00000511281 SOX14O95416 240 aa3.03□□□□□ -1.92
HMGB1P47-201ENST00000511281 F8A1P23610 371 aa3.03□□□□□ -1.92
HMGB1P47-201ENST00000511281 RCVRNP35243 200 aa3.03□□□□□ -1.92
HMGB1P47-201ENST00000511281 RAB25P57735 213 aa3.03□□□□□ -1.92
HMGB1P47-201ENST00000511281 LY6EQ16553 131 aa3.03□□□□□ -1.92
HMGB1P47-201ENST00000511281 SLC36A2Q495M3 483 aa3.03□□□□□ -1.92
HMGB1P47-201ENST00000511281 DNM1P34Q6PK57 102 aa3.03□□□□□ -1.92
HMGB1P47-201ENST00000511281 VN1R4Q7Z5H5 301 aa3.03□□□□□ -1.92
HMGB1P47-201ENST00000511281 AMN1Q8IY45 258 aa3.03□□□□□ -1.92
HMGB1P47-201ENST00000511281 TMEM156Q8N614 296 aa3.03□□□□□ -1.92
HMGB1P47-201ENST00000511281 ZNF2Q9BSG1 426 aaPredicted RBP3.03□□□□□ -1.92
HMGB1P47-201ENST00000511281 CHST5Q9GZS9 411 aa3.03□□□□□ -1.92
HMGB1P47-201ENST00000511281 KIF26AQ9ULI4 1882 aaPredicted RBP3.03□□□□□ -1.93
HMGB1P47-201ENST00000511281 MAP3K5Q99683 1374 aa3.02□□□□□ -1.93
HMGB1P47-201ENST00000511281 CLUHO75153 1309 aa3.02□□□□□ -1.93
HMGB1P47-201ENST00000511281 GOLGA8KD6RF30 607 aa3.02□□□□□ -1.93
HMGB1P47-201ENST00000511281 F5H5P2 479 aa3.02□□□□□ -1.93
HMGB1P47-201ENST00000511281 GOLGA8MH3BSY2 632 aa3.02□□□□□ -1.93
HMGB1P47-201ENST00000511281 K7EM74 188 aa3.02□□□□□ -1.93
HMGB1P47-201ENST00000511281 CCRL2O00421 344 aa3.02□□□□□ -1.93
HMGB1P47-201ENST00000511281 E2F6O75461 281 aa3.02□□□□□ -1.93
HMGB1P47-201ENST00000511281 IGHG2P01859 326 aa3.02□□□□□ -1.93
HMGB1P47-201ENST00000511281 ZNF3P17036 446 aa3.02□□□□□ -1.93
HMGB1P47-201ENST00000511281 HSPA13P48723 471 aa3.02□□□□□ -1.93
HMGB1P47-201ENST00000511281 GDI2P50395 445 aaKnown RBP3.02□□□□□ -1.93
HMGB1P47-201ENST00000511281 MP68P56378 58 aa3.02□□□□□ -1.93
HMGB1P47-201ENST00000511281 SKP2Q13309 424 aa3.02□□□□□ -1.93
HMGB1P47-201ENST00000511281 IGFBP7Q16270 282 aa3.02□□□□□ -1.93
HMGB1P47-201ENST00000511281 KHDRBS2Q5VWX1 349 aaKnown RBP3.02□□□□□ -1.93
HMGB1P47-201ENST00000511281 SPNS3Q6ZMD2 512 aa3.02□□□□□ -1.93
HMGB1P47-201ENST00000511281 FAM19A3Q7Z5A8 133 aa3.02□□□□□ -1.93
HMGB1P47-201ENST00000511281 TMEM251Q8N6I4 163 aa3.02□□□□□ -1.93
HMGB1P47-201ENST00000511281 C2orf15Q8WU43 125 aaKnown RBP3.02□□□□□ -1.93
HMGB1P47-201ENST00000511281 TAMM41Q96BW9 452 aa3.02□□□□□ -1.93
HMGB1P47-201ENST00000511281 MBOAT7Q96N66 472 aa3.02□□□□□ -1.93
HMGB1P47-201ENST00000511281 B9D2Q9BPU9 175 aa3.02□□□□□ -1.93
HMGB1P47-201ENST00000511281 SHANK2-AS3Q9BTD1 123 aa3.02□□□□□ -1.93
HMGB1P47-201ENST00000511281 ULBP1Q9BZM6 244 aa3.02□□□□□ -1.93
HMGB1P47-201ENST00000511281 TXNIPQ9H3M7 391 aa3.02□□□□□ -1.93
HMGB1P47-201ENST00000511281 BRWD3Q6RI45 1802 aa3.02□□□□□ -1.93
HMGB1P47-201ENST00000511281 YLPM1P49750 1951 aaKnown RBP3.01□□□□□ -1.93
HMGB1P47-201ENST00000511281 LEUTXA8MZ59 168 aa3.01□□□□□ -1.93
HMGB1P47-201ENST00000511281 CGB3P0DN86 165 aa3.01□□□□□ -1.93
HMGB1P47-201ENST00000511281 CGB7P0DN87 165 aa3.01□□□□□ -1.93
HMGB1P47-201ENST00000511281 MLNP12872 115 aa3.01□□□□□ -1.93
HMGB1P47-201ENST00000511281 COILP38432 576 aaPredicted RBP3.01□□□□□ -1.93
HMGB1P47-201ENST00000511281 CASP8Q14790 479 aa3.01□□□□□ -1.93
HMGB1P47-201ENST00000511281 C4orf26Q17RF5 130 aa3.01□□□□□ -1.93
HMGB1P47-201ENST00000511281 ZCWPW2Q504Y3 356 aa3.01□□□□□ -1.93
HMGB1P47-201ENST00000511281 TTC33Q6PID6 262 aaPredicted RBP3.01□□□□□ -1.93
HMGB1P47-201ENST00000511281 IGFL1Q6UW32 110 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms