RNA–Protein interactions for RNA: ENST00000508852.5

CCHCR1-227, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-227ENST00000508852 FAM90A13PP0C7W8 464 aa10.85□□□□□ -0.67
CCHCR1-227ENST00000508852 FAM90A14PP0C7W9 464 aa10.85□□□□□ -0.67
CCHCR1-227ENST00000508852 FAM90A24PP0C7X0 464 aa10.85□□□□□ -0.67
CCHCR1-227ENST00000508852 ZNF93P35789 620 aaPredicted RBP10.85□□□□□ -0.67
CCHCR1-227ENST00000508852 MPV17LQ2QL34 196 aa10.85□□□□□ -0.67
CCHCR1-227ENST00000508852 TMEM30BQ3MIR4 351 aa10.85□□□□□ -0.67
CCHCR1-227ENST00000508852 Q3ZCU0 254 aa10.85□□□□□ -0.67
CCHCR1-227ENST00000508852 Q6ZS46 218 aa10.85□□□□□ -0.67
CCHCR1-227ENST00000508852 OSR2Q8N2R0 312 aa10.85□□□□□ -0.67
CCHCR1-227ENST00000508852 OR51D1Q8NGF3 324 aa10.85□□□□□ -0.67
CCHCR1-227ENST00000508852 OR52M1Q8NGK5 317 aa10.85□□□□□ -0.67
CCHCR1-227ENST00000508852 OR10X1Q8NGY0 326 aa10.85□□□□□ -0.67
CCHCR1-227ENST00000508852 MRAPQ8TCY5 172 aa10.85□□□□□ -0.67
CCHCR1-227ENST00000508852 CHPT1Q8WUD6 406 aa10.85□□□□□ -0.67
CCHCR1-227ENST00000508852 TMEM106AQ96A25 262 aa10.85□□□□□ -0.67
CCHCR1-227ENST00000508852 PPIL3Q9H2H8 161 aaKnown RBP10.85□□□□□ -0.67
CCHCR1-227ENST00000508852 SPACA1Q9HBV2 294 aa10.85□□□□□ -0.67
CCHCR1-227ENST00000508852 AMBNQ9NP70 447 aa10.85□□□□□ -0.67
CCHCR1-227ENST00000508852 ING3Q9NXR8 418 aa10.85□□□□□ -0.67
CCHCR1-227ENST00000508852 SMPD3Q9NY59 655 aaPredicted RBP10.85□□□□□ -0.67
CCHCR1-227ENST00000508852 ZMAT5Q9UDW3 170 aaKnown RBP10.85□□□□□ -0.67
CCHCR1-227ENST00000508852 ST3GAL6Q9Y274 331 aa10.85□□□□□ -0.67
CCHCR1-227ENST00000508852 ZNF281Q9Y2X9 895 aa10.85□□□□□ -0.67
CCHCR1-227ENST00000508852 EXOSC1Q9Y3B2 195 aaKnown RBP10.85□□□□□ -0.67
CCHCR1-227ENST00000508852 TMEM30CPA0ZSE6 113 aa10.84□□□□□ -0.67
CCHCR1-227ENST00000508852 E9PI62 339 aa10.84□□□□□ -0.67
CCHCR1-227ENST00000508852 EBAG9O00559 213 aa10.84□□□□□ -0.67
CCHCR1-227ENST00000508852 HTR3BO95264 441 aa10.84□□□□□ -0.67
CCHCR1-227ENST00000508852 LIMS3P0CW19 117 aa10.84□□□□□ -0.67
CCHCR1-227ENST00000508852 LIMS4P0CW20 117 aa10.84□□□□□ -0.67
CCHCR1-227ENST00000508852 JUNBP17275 347 aaPredicted RBP10.84□□□□□ -0.67
CCHCR1-227ENST00000508852 CD24P25063 80 aa10.84□□□□□ -0.67
CCHCR1-227ENST00000508852 IL3RAP26951 378 aa10.84□□□□□ -0.67
CCHCR1-227ENST00000508852 BDKRB2P30411 391 aa10.84□□□□□ -0.67
CCHCR1-227ENST00000508852 ZSCAN26Q16670 478 aa10.84□□□□□ -0.67
CCHCR1-227ENST00000508852 OXLD1Q5BKU9 147 aa10.84□□□□□ -0.67
CCHCR1-227ENST00000508852 RSBN1Q5VWQ0 802 aaPredicted RBP10.84□□□□□ -0.67
CCHCR1-227ENST00000508852 TTC23Q5W5X9 447 aa10.84□□□□□ -0.67
CCHCR1-227ENST00000508852 BAIAP2L2Q6UXY1 529 aa10.84□□□□□ -0.67
CCHCR1-227ENST00000508852 STX19Q8N4C7 294 aa10.84□□□□□ -0.67
CCHCR1-227ENST00000508852 COMMD1Q8N668 190 aa10.84□□□□□ -0.67
CCHCR1-227ENST00000508852 C8orf31Q8N9H6 132 aa10.84□□□□□ -0.67
CCHCR1-227ENST00000508852 SETD9Q8NE22 299 aa10.84□□□□□ -0.67
CCHCR1-227ENST00000508852 OR51A2Q8NGJ7 313 aa10.84□□□□□ -0.67
CCHCR1-227ENST00000508852 OR52N1Q8NH53 320 aa10.84□□□□□ -0.67
CCHCR1-227ENST00000508852 THRSPQ92748 146 aa10.84□□□□□ -0.67
CCHCR1-227ENST00000508852 PHF21AQ96BD5 680 aa10.84□□□□□ -0.67
CCHCR1-227ENST00000508852 SMIM19Q96E16 107 aa10.84□□□□□ -0.67
CCHCR1-227ENST00000508852 MRPS24Q96EL2 167 aaKnown RBP10.84□□□□□ -0.67
CCHCR1-227ENST00000508852 SLC29A1Q99808 456 aa10.84□□□□□ -0.67
CCHCR1-227ENST00000508852 DPCDQ9BVM2 203 aaPredicted RBP10.84□□□□□ -0.67
CCHCR1-227ENST00000508852 GON7Q9BXV9 100 aa10.84□□□□□ -0.67
CCHCR1-227ENST00000508852 BABAM2Q9NXR7 383 aa10.84□□□□□ -0.67
CCHCR1-227ENST00000508852 ING4Q9UNL4 249 aa10.84□□□□□ -0.67
CCHCR1-227ENST00000508852 PSMB11A5LHX3 300 aa10.83□□□□□ -0.68
CCHCR1-227ENST00000508852 FAM172BPA6NC97 362 aa10.83□□□□□ -0.68
CCHCR1-227ENST00000508852 CCRL2O00421 344 aa10.83□□□□□ -0.68
CCHCR1-227ENST00000508852 HSPB6O14558 160 aa10.83□□□□□ -0.68
CCHCR1-227ENST00000508852 OR7C1O76099 320 aaPredicted RBP10.83□□□□□ -0.68
CCHCR1-227ENST00000508852 GAPDHP04406 335 aaKnown RBP10.83□□□□□ -0.68
CCHCR1-227ENST00000508852 GTF2F2P13984 249 aa10.83□□□□□ -0.68
CCHCR1-227ENST00000508852 TMEM11P17152 192 aa10.83□□□□□ -0.68
CCHCR1-227ENST00000508852 GDNFP39905 211 aa10.83□□□□□ -0.68
CCHCR1-227ENST00000508852 SOX2P48431 317 aa10.83□□□□□ -0.68
CCHCR1-227ENST00000508852 RBM11P57052 281 aaKnown RBP10.83□□□□□ -0.68
CCHCR1-227ENST00000508852 TAS2R43P59537 309 aa10.83□□□□□ -0.68
CCHCR1-227ENST00000508852 SLC35B1P78383 322 aa10.83□□□□□ -0.68
CCHCR1-227ENST00000508852 HES1Q14469 280 aa10.83□□□□□ -0.68
CCHCR1-227ENST00000508852 TMEM95Q3KNT9 176 aa10.83□□□□□ -0.68
CCHCR1-227ENST00000508852 YIF1BQ5BJH7 314 aa10.83□□□□□ -0.68
CCHCR1-227ENST00000508852 C9orf152Q5JTZ5 239 aa10.83□□□□□ -0.68
CCHCR1-227ENST00000508852 DDI2Q5TDH0 399 aa10.83□□□□□ -0.68
CCHCR1-227ENST00000508852 Q6ZPA2 131 aa10.83□□□□□ -0.68
CCHCR1-227ENST00000508852 RNF144BQ7Z419 303 aa10.83□□□□□ -0.68
CCHCR1-227ENST00000508852 CDH26Q8IXH8 852 aa10.83□□□□□ -0.68
CCHCR1-227ENST00000508852 SUMF2Q8NBJ7 301 aa10.83□□□□□ -0.68
CCHCR1-227ENST00000508852 OR13A1Q8NGR1 328 aa10.83□□□□□ -0.68
CCHCR1-227ENST00000508852 DPF1Q92782 380 aa10.83□□□□□ -0.68
CCHCR1-227ENST00000508852 MYDGFQ969H8 173 aa10.83□□□□□ -0.68
CCHCR1-227ENST00000508852 ZFP57Q9NU63 452 aa10.83□□□□□ -0.68
CCHCR1-227ENST00000508852 TAS2R4Q9NYW5 299 aa10.83□□□□□ -0.68
CCHCR1-227ENST00000508852 AASSQ9UDR5 926 aa10.83□□□□□ -0.68
CCHCR1-227ENST00000508852 DIMT1Q9UNQ2 313 aaKnown RBP10.83□□□□□ -0.68
CCHCR1-227ENST00000508852 PSG11Q9UQ72 335 aa10.83□□□□□ -0.68
CCHCR1-227ENST00000508852 A0A1W2PRX2 142 aa10.82□□□□□ -0.68
CCHCR1-227ENST00000508852 OGG1O15527 345 aa10.82□□□□□ -0.68
CCHCR1-227ENST00000508852 TXNL1O43396 289 aa10.82□□□□□ -0.68
CCHCR1-227ENST00000508852 ORC5O43913 435 aa10.82□□□□□ -0.68
CCHCR1-227ENST00000508852 GPX5O75715 221 aa10.82□□□□□ -0.68
CCHCR1-227ENST00000508852 SNRNP70P08621 437 aaKnown RBP10.82□□□□□ -0.68
CCHCR1-227ENST00000508852 GTF2A1P52655 376 aaPredicted RBP10.82□□□□□ -0.68
CCHCR1-227ENST00000508852 ZNF816Q0VGE8 651 aaPredicted RBP10.82□□□□□ -0.68
CCHCR1-227ENST00000508852 RIPK1Q13546 671 aa10.82□□□□□ -0.68
CCHCR1-227ENST00000508852 DCTN2Q13561 401 aaKnown RBP10.82□□□□□ -0.68
CCHCR1-227ENST00000508852 PIGYQ3MUY2 71 aa10.82□□□□□ -0.68
CCHCR1-227ENST00000508852 KHDC1LQ5JSQ8 128 aa10.82□□□□□ -0.68
CCHCR1-227ENST00000508852 TRAT1Q6PIZ9 186 aa10.82□□□□□ -0.68
CCHCR1-227ENST00000508852 FOXRED2Q8IWF2 684 aa10.82□□□□□ -0.68
CCHCR1-227ENST00000508852 LINC00311Q8N616 119 aa10.82□□□□□ -0.68
CCHCR1-227ENST00000508852 MRGPRDQ8TDS7 321 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms