RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 ING5Q8WYH8 240 aa2.82□□□□□ -1.96
ECHDC1-217ENST00000488087 PELI1Q96FA3 418 aa2.82□□□□□ -1.96
ECHDC1-217ENST00000488087 FAHD2AQ96GK7 314 aa2.82□□□□□ -1.96
ECHDC1-217ENST00000488087 VSIG2Q96IQ7 327 aa2.82□□□□□ -1.96
ECHDC1-217ENST00000488087 CNN2Q99439 309 aaKnown RBP2.82□□□□□ -1.96
ECHDC1-217ENST00000488087 PRRT1Q99946 306 aa2.82□□□□□ -1.96
ECHDC1-217ENST00000488087 CHRDL1Q9BU40 450 aa2.82□□□□□ -1.96
ECHDC1-217ENST00000488087 OR2AG1Q9H205 316 aa2.82□□□□□ -1.96
ECHDC1-217ENST00000488087 MFSD1Q9H3U5 465 aa2.82□□□□□ -1.96
ECHDC1-217ENST00000488087 PPDPFQ9H3Y8 114 aa2.82□□□□□ -1.96
ECHDC1-217ENST00000488087 HRASLSQ9HDD0 168 aa2.82□□□□□ -1.96
ECHDC1-217ENST00000488087 MYOZ2Q9NPC6 264 aa2.82□□□□□ -1.96
ECHDC1-217ENST00000488087 PARP11Q9NR21 331 aa2.82□□□□□ -1.96
ECHDC1-217ENST00000488087 CA10Q9NS85 328 aa2.82□□□□□ -1.96
ECHDC1-217ENST00000488087 NRBP2Q9NSY0 501 aa2.82□□□□□ -1.96
ECHDC1-217ENST00000488087 DOK5Q9P104 306 aa2.82□□□□□ -1.96
ECHDC1-217ENST00000488087 TRMT112Q9UI30 125 aaKnown RBP2.82□□□□□ -1.96
ECHDC1-217ENST00000488087 PCTPQ9UKL6 214 aa2.82□□□□□ -1.96
ECHDC1-217ENST00000488087 FIS1Q9Y3D6 152 aa2.82□□□□□ -1.96
ECHDC1-217ENST00000488087 WDR45Q9Y484 360 aa2.82□□□□□ -1.96
ECHDC1-217ENST00000488087 OR51B4Q9Y5P0 310 aa2.82□□□□□ -1.96
ECHDC1-217ENST00000488087 WIF1Q9Y5W5 379 aa2.82□□□□□ -1.96
ECHDC1-217ENST00000488087 LTBP4Q8N2S1 1624 aa2.82□□□□□ -1.96
ECHDC1-217ENST00000488087 COL18A1P39060 1754 aa2.82□□□□□ -1.96
ECHDC1-217ENST00000488087 BTAF1O14981 1849 aa2.82□□□□□ -1.96
ECHDC1-217ENST00000488087 MICAL3Q7RTP6 2002 aa2.81□□□□□ -1.96
ECHDC1-217ENST00000488087 FXYD6-FXYD2A0A087WZ82 144 aa2.81□□□□□ -1.96
ECHDC1-217ENST00000488087 TRAV14DV4A0A0A6YYC5 116 aa2.81□□□□□ -1.96
ECHDC1-217ENST00000488087 SMCO3A2RU48 225 aa2.81□□□□□ -1.96
ECHDC1-217ENST00000488087 C7orf77A4D0Y5 90 aa2.81□□□□□ -1.96
ECHDC1-217ENST00000488087 ZNF726A6NNF4 738 aa2.81□□□□□ -1.96
ECHDC1-217ENST00000488087 GABRR3A8MPY1 467 aa2.81□□□□□ -1.96
ECHDC1-217ENST00000488087 GABRPO00591 440 aa2.81□□□□□ -1.96
ECHDC1-217ENST00000488087 OR7A17O14581 309 aa2.81□□□□□ -1.96
ECHDC1-217ENST00000488087 MFSD11O43934 449 aa2.81□□□□□ -1.96
ECHDC1-217ENST00000488087 ADAP1O75689 374 aa2.81□□□□□ -1.96
ECHDC1-217ENST00000488087 B3GAT3O94766 335 aa2.81□□□□□ -1.96
ECHDC1-217ENST00000488087 CLDN9O95484 217 aa2.81□□□□□ -1.96
ECHDC1-217ENST00000488087 ZNF682O95780 498 aa2.81□□□□□ -1.96
ECHDC1-217ENST00000488087 IFNA21P01568 189 aa2.81□□□□□ -1.96
ECHDC1-217ENST00000488087 IFNA6P05013 189 aa2.81□□□□□ -1.96
ECHDC1-217ENST00000488087 HLA-DQB2P05538 268 aa2.81□□□□□ -1.96
ECHDC1-217ENST00000488087 EIF4EP06730 217 aaKnown RBP2.81□□□□□ -1.96
ECHDC1-217ENST00000488087 IL3P08700 152 aa2.81□□□□□ -1.96
ECHDC1-217ENST00000488087 SFTA3P0C7M3 94 aa2.81□□□□□ -1.96
ECHDC1-217ENST00000488087 GZMBP10144 247 aa2.81□□□□□ -1.96
ECHDC1-217ENST00000488087 SCGB1A1P11684 91 aa2.81□□□□□ -1.96
ECHDC1-217ENST00000488087 PGCP20142 388 aa2.81□□□□□ -1.96
ECHDC1-217ENST00000488087 TBPP20226 339 aa2.81□□□□□ -1.96
ECHDC1-217ENST00000488087 CD82P27701 267 aa2.81□□□□□ -1.96
ECHDC1-217ENST00000488087 CD80P33681 288 aa2.81□□□□□ -1.96
ECHDC1-217ENST00000488087 FAUP35544 74 aaKnown RBP2.81□□□□□ -1.96
ECHDC1-217ENST00000488087 IFNGR2P38484 337 aa2.81□□□□□ -1.96
ECHDC1-217ENST00000488087 RBM34P42696 430 aaKnown RBP2.81□□□□□ -1.96
ECHDC1-217ENST00000488087 GYG1P46976 350 aa2.81□□□□□ -1.96
ECHDC1-217ENST00000488087 CCR8P51685 355 aa2.81□□□□□ -1.96
ECHDC1-217ENST00000488087 ATP5IP56385 69 aaPredicted RBP2.81□□□□□ -1.96
ECHDC1-217ENST00000488087 H2BFSP57053 126 aa2.81□□□□□ -1.96
ECHDC1-217ENST00000488087 RGS8P57771 180 aaPredicted RBP2.81□□□□□ -1.96
ECHDC1-217ENST00000488087 TAS2R19P59542 299 aa2.81□□□□□ -1.96
ECHDC1-217ENST00000488087 ERVPABLB-1P60509 514 aa2.81□□□□□ -1.96
ECHDC1-217ENST00000488087 CDK6Q00534 326 aa2.81□□□□□ -1.96
ECHDC1-217ENST00000488087 OC90Q02509 493 aaPredicted RBP2.81□□□□□ -1.96
ECHDC1-217ENST00000488087 PSG3Q16557 428 aa2.81□□□□□ -1.96
ECHDC1-217ENST00000488087 SYPL1Q16563 259 aa2.81□□□□□ -1.96
ECHDC1-217ENST00000488087 SCGB2B2Q4G0G5 96 aa2.81□□□□□ -1.96
ECHDC1-217ENST00000488087 HIKESHIQ53FT3 197 aa2.81□□□□□ -1.96
ECHDC1-217ENST00000488087 KHDC3LQ587J8 217 aa2.81□□□□□ -1.96
ECHDC1-217ENST00000488087 NCMAPQ5T1S8 102 aa2.81□□□□□ -1.96
ECHDC1-217ENST00000488087 AKR1C8PQ5T2L2 129 aa2.81□□□□□ -1.96
ECHDC1-217ENST00000488087 C1orf194Q5T5A4 169 aa2.81□□□□□ -1.96
ECHDC1-217ENST00000488087 PRAMEF5Q5TYX0 476 aa2.81□□□□□ -1.96
ECHDC1-217ENST00000488087 PRAMEF6Q5VXH4 476 aa2.81□□□□□ -1.96
ECHDC1-217ENST00000488087 CYB5R2Q6BCY4 276 aa2.81□□□□□ -1.96
ECHDC1-217ENST00000488087 SFXN4Q6P4A7 337 aa2.81□□□□□ -1.96
ECHDC1-217ENST00000488087 TCF24Q7RTU0 167 aa2.81□□□□□ -1.96
ECHDC1-217ENST00000488087 ZNF546Q86UE3 836 aa2.81□□□□□ -1.96
ECHDC1-217ENST00000488087 SERPINA9Q86WD7 417 aa2.81□□□□□ -1.96
ECHDC1-217ENST00000488087 APOBEC3FQ8IUX4 373 aaKnown RBP2.81□□□□□ -1.96
ECHDC1-217ENST00000488087 GPR65Q8IYL9 337 aa2.81□□□□□ -1.96
ECHDC1-217ENST00000488087 PRSS58Q8IYP2 241 aa2.81□□□□□ -1.96
ECHDC1-217ENST00000488087 ZNF664Q8N3J9 261 aa2.81□□□□□ -1.96
ECHDC1-217ENST00000488087 CLDN19Q8N6F1 224 aa2.81□□□□□ -1.96
ECHDC1-217ENST00000488087 LRRC52Q8N7C0 313 aa2.81□□□□□ -1.96
ECHDC1-217ENST00000488087 ACBD4Q8NC06 268 aa2.81□□□□□ -1.96
ECHDC1-217ENST00000488087 OR4K5Q8NGD3 323 aa2.81□□□□□ -1.96
ECHDC1-217ENST00000488087 OR10AD1Q8NGE0 317 aa2.81□□□□□ -1.96
ECHDC1-217ENST00000488087 OR10R2Q8NGX6 335 aa2.81□□□□□ -1.96
ECHDC1-217ENST00000488087 OR6N1Q8NGY5 312 aa2.81□□□□□ -1.96
ECHDC1-217ENST00000488087 OR51Q1Q8NH59 317 aa2.81□□□□□ -1.96
ECHDC1-217ENST00000488087 OR51A7Q8NH64 312 aa2.81□□□□□ -1.96
ECHDC1-217ENST00000488087 OR5AK2Q8NH90 309 aa2.81□□□□□ -1.96
ECHDC1-217ENST00000488087 C16orf78Q8WTQ4 265 aa2.81□□□□□ -1.96
ECHDC1-217ENST00000488087 OR8D1Q8WZ84 308 aa2.81□□□□□ -1.96
ECHDC1-217ENST00000488087 ST8SIA1Q92185 356 aa2.81□□□□□ -1.96
ECHDC1-217ENST00000488087 TM4SF19Q96DZ7 209 aa2.81□□□□□ -1.96
ECHDC1-217ENST00000488087 PIK3IP1Q96FE7 263 aa2.81□□□□□ -1.96
ECHDC1-217ENST00000488087 AMDHD1Q96NU7 426 aa2.81□□□□□ -1.96
ECHDC1-217ENST00000488087 TRIB3Q96RU7 358 aa2.81□□□□□ -1.96
ECHDC1-217ENST00000488087 ADAT1Q9BUB4 502 aaKnown RBP2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms