RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 HEPN1Q6WQI6 88 aa10.99□□□□□ -0.65
VPS52-218ENST00000482399 GNPNAT1Q96EK6 184 aaPredicted RBP10.99□□□□□ -0.65
VPS52-218ENST00000482399 PLPPR2Q96GM1 343 aa10.99□□□□□ -0.65
VPS52-218ENST00000482399 SEC14L6B5MCN3 397 aa10.99□□□□□ -0.65
VPS52-218ENST00000482399 HBE1P02100 147 aa10.99□□□□□ -0.65
VPS52-218ENST00000482399 SOD3P08294 240 aa10.99□□□□□ -0.65
VPS52-218ENST00000482399 LSM6P62312 80 aaKnown RBP10.99□□□□□ -0.65
VPS52-218ENST00000482399 CCL7P80098 99 aa10.99□□□□□ -0.65
VPS52-218ENST00000482399 LTC4SQ16873 150 aa10.99□□□□□ -0.65
VPS52-218ENST00000482399 ZNF66Q6ZN08 573 aa10.99□□□□□ -0.65
VPS52-218ENST00000482399 ZNF818PQ6ZRF7 136 aa10.99□□□□□ -0.65
VPS52-218ENST00000482399 LHFPL2Q6ZUX7 228 aa10.99□□□□□ -0.65
VPS52-218ENST00000482399 RPS19BP1Q86WX3 136 aaKnown RBP10.99□□□□□ -0.65
VPS52-218ENST00000482399 ZNF100Q8IYN0 542 aa10.99□□□□□ -0.65
VPS52-218ENST00000482399 DMBX1Q8NFW5 382 aa10.99□□□□□ -0.65
VPS52-218ENST00000482399 GLRX2Q9NS18 164 aa10.99□□□□□ -0.65
VPS52-218ENST00000482399 CACNG5Q9UF02 275 aa10.99□□□□□ -0.65
VPS52-218ENST00000482399 UBE2L5PA0A1B0GUS4 154 aa10.99□□□□□ -0.65
VPS52-218ENST00000482399 A0A1W2PNV4 684 aa10.99□□□□□ -0.65
VPS52-218ENST00000482399 LYL1P12980 280 aa10.99□□□□□ -0.65
VPS52-218ENST00000482399 HOXA5P20719 270 aa10.99□□□□□ -0.65
VPS52-218ENST00000482399 BCL3P20749 454 aa10.99□□□□□ -0.65
VPS52-218ENST00000482399 GDF1P27539 372 aa10.99□□□□□ -0.65
VPS52-218ENST00000482399 NXPH1P58417 271 aa10.99□□□□□ -0.65
VPS52-218ENST00000482399 SNIP1Q8TAD8 396 aaKnown RBP10.99□□□□□ -0.65
VPS52-218ENST00000482399 HLA-CQ95604 372 aa10.99□□□□□ -0.65
VPS52-218ENST00000482399 MSI2Q96DH6 328 aaKnown RBP10.99□□□□□ -0.65
VPS52-218ENST00000482399 FOXB1Q99853 325 aa10.99□□□□□ -0.65
VPS52-218ENST00000482399 NUDT16L1Q9BRJ7 211 aaKnown RBP10.99□□□□□ -0.65
VPS52-218ENST00000482399 SLC25A22Q9H936 323 aa10.99□□□□□ -0.65
VPS52-218ENST00000482399 OCIAD1Q9NX40 245 aa10.99□□□□□ -0.65
VPS52-218ENST00000482399 CLN3Q13286 438 aa10.98□□□□□ -0.65
VPS52-218ENST00000482399 SYT13Q7L8C5 426 aa10.98□□□□□ -0.65
VPS52-218ENST00000482399 ABHD3Q8WU67 409 aa10.98□□□□□ -0.65
VPS52-218ENST00000482399 MUCL1Q96DR8 90 aa10.98□□□□□ -0.65
VPS52-218ENST00000482399 POLEQ07864 2286 aa10.98□□□□□ -0.65
VPS52-218ENST00000482399 ZNF705FA8MVS1 300 aaPredicted RBP10.98□□□□□ -0.65
VPS52-218ENST00000482399 ZNF732B4DXR9 585 aa10.98□□□□□ -0.65
VPS52-218ENST00000482399 TRDCB7Z8K6 153 aa10.98□□□□□ -0.65
VPS52-218ENST00000482399 CLDN34H7C241 214 aa10.98□□□□□ -0.65
VPS52-218ENST00000482399 K7N7A8 449 aa10.98□□□□□ -0.65
VPS52-218ENST00000482399 SCGB1D1O95968 90 aa10.98□□□□□ -0.65
VPS52-218ENST00000482399 IGHV2-70P01814 119 aa10.98□□□□□ -0.65
VPS52-218ENST00000482399 SRP19P09132 144 aaKnown RBP10.98□□□□□ -0.65
VPS52-218ENST00000482399 ZNF705DP0CH99 300 aaPredicted RBP10.98□□□□□ -0.65
VPS52-218ENST00000482399 ZNF705BP0CI00 300 aaPredicted RBP10.98□□□□□ -0.65
VPS52-218ENST00000482399 SSR4P51571 173 aa10.98□□□□□ -0.65
VPS52-218ENST00000482399 ZNF808Q8N4W9 903 aaPredicted RBP10.98□□□□□ -0.65
VPS52-218ENST00000482399 PLA2G3Q9NZ20 509 aa10.98□□□□□ -0.65
VPS52-218ENST00000482399 KIAA1456Q9P272 454 aa10.98□□□□□ -0.65
VPS52-218ENST00000482399 DMRT1Q9Y5R6 373 aa10.98□□□□□ -0.65
VPS52-218ENST00000482399 A0A0U1RQV5 110 aa10.97□□□□□ -0.65
VPS52-218ENST00000482399 ELOBQ15370 118 aa10.97□□□□□ -0.65
VPS52-218ENST00000482399 CST9LP1Q5W188 147 aa10.97□□□□□ -0.65
VPS52-218ENST00000482399 TREM2Q9NZC2 230 aa10.97□□□□□ -0.65
VPS52-218ENST00000482399 PRR14LQ5THK1 2151 aa10.97□□□□□ -0.65
VPS52-218ENST00000482399 IGKV1D-13A0A0B4J2D9 117 aa10.97□□□□□ -0.65
VPS52-218ENST00000482399 ZNF729A6NN14 1252 aaPredicted RBP10.97□□□□□ -0.65
VPS52-218ENST00000482399 H7BYZ3 331 aa10.97□□□□□ -0.65
VPS52-218ENST00000482399 IGHV2-5P01817 119 aa10.97□□□□□ -0.65
VPS52-218ENST00000482399 IGKV1-13P0DP09 117 aa10.97□□□□□ -0.65
VPS52-218ENST00000482399 GPX4P36969 197 aaPredicted RBP10.97□□□□□ -0.65
VPS52-218ENST00000482399 PLA2G5P39877 138 aa10.97□□□□□ -0.65
VPS52-218ENST00000482399 SRPXP78539 464 aa10.97□□□□□ -0.65
VPS52-218ENST00000482399 ZNF385CQ66K41 422 aaPredicted RBP10.97□□□□□ -0.65
VPS52-218ENST00000482399 OR4F5Q8NH21 305 aa10.97□□□□□ -0.65
VPS52-218ENST00000482399 OR10J5Q8NHC4 309 aa10.97□□□□□ -0.65
VPS52-218ENST00000482399 RHBDD1Q8TEB9 315 aa10.97□□□□□ -0.65
VPS52-218ENST00000482399 CCDC74BQ96LY2 380 aa10.97□□□□□ -0.65
VPS52-218ENST00000482399 OR4F4Q96R69 305 aa10.97□□□□□ -0.65
VPS52-218ENST00000482399 TAAR9Q96RI9 348 aa10.97□□□□□ -0.65
VPS52-218ENST00000482399 RPRMQ9NS64 109 aa10.97□□□□□ -0.65
VPS52-218ENST00000482399 PSENENQ9NZ42 101 aa10.97□□□□□ -0.65
VPS52-218ENST00000482399 EP300Q09472 2414 aaPredicted RBP10.97□□□□□ -0.65
VPS52-218ENST00000482399 CEACAM18A8MTB9 384 aa10.97□□□□□ -0.65
VPS52-218ENST00000482399 FAM157AC9JC47 383 aa10.97□□□□□ -0.65
VPS52-218ENST00000482399 PPP5D1E7EU14 171 aa10.97□□□□□ -0.65
VPS52-218ENST00000482399 PROB1E7EW31 1015 aa10.97□□□□□ -0.65
VPS52-218ENST00000482399 MRPL33O75394 65 aaKnown RBP10.97□□□□□ -0.65
VPS52-218ENST00000482399 PSG2P11465 335 aa10.97□□□□□ -0.65
VPS52-218ENST00000482399 FUT6P51993 359 aa10.97□□□□□ -0.65
VPS52-218ENST00000482399 UBE2G2P60604 165 aa10.97□□□□□ -0.65
VPS52-218ENST00000482399 PSG4Q00888 419 aa10.97□□□□□ -0.65
VPS52-218ENST00000482399 MOB3AQ96BX8 217 aa10.97□□□□□ -0.65
VPS52-218ENST00000482399 TM2D1Q9BX74 207 aa10.97□□□□□ -0.65
VPS52-218ENST00000482399 TMEM222Q9H0R3 208 aa10.97□□□□□ -0.65
VPS52-218ENST00000482399 GPR27Q9NS67 375 aa10.97□□□□□ -0.65
VPS52-218ENST00000482399 TRAPPC2LQ9UL33 140 aa10.97□□□□□ -0.65
VPS52-218ENST00000482399 FRYQ5TBA9 3013 aa10.96□□□□□ -0.65
VPS52-218ENST00000482399 LOC102725191A0A1B0GVB3 256 aa10.96□□□□□ -0.65
VPS52-218ENST00000482399 A0A1W2PR77 199 aa10.96□□□□□ -0.65
VPS52-218ENST00000482399 SIRPB1O00241 398 aa10.96□□□□□ -0.65
VPS52-218ENST00000482399 KRASP01116 189 aa10.96□□□□□ -0.65
VPS52-218ENST00000482399 DTYMKP23919 212 aa10.96□□□□□ -0.65
VPS52-218ENST00000482399 RTP5Q14D33 572 aa10.96□□□□□ -0.65
VPS52-218ENST00000482399 NCR3LG1Q68D85 454 aa10.96□□□□□ -0.65
VPS52-218ENST00000482399 VSIRQ9H7M9 311 aa10.96□□□□□ -0.65
VPS52-218ENST00000482399 VDAC1P21796 283 aa10.96□□□□□ -0.66
VPS52-218ENST00000482399 CHRNA7P36544 502 aa10.96□□□□□ -0.66
VPS52-218ENST00000482399 RAB35Q15286 201 aa10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms