RNA–Protein interactions for RNA: ENST00000477763.1

SMNDC1-205, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 2

Gene SMNDC1, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-205ENST00000477763 TAC3Q9UHF0 121 aa2.33□□□□□ -2.04
SMNDC1-205ENST00000477763 SNX24Q9Y343 169 aa2.33□□□□□ -2.04
SMNDC1-205ENST00000477763 POLR3HQ9Y535 204 aaPredicted RBP2.33□□□□□ -2.04
SMNDC1-205ENST00000477763 USH1CQ9Y6N9 552 aa2.33□□□□□ -2.04
SMNDC1-205ENST00000477763 ZNF780BQ9Y6R6 833 aa2.33□□□□□ -2.04
SMNDC1-205ENST00000477763 KIAA0232Q92628 1395 aa2.33□□□□□ -2.04
SMNDC1-205ENST00000477763 OR2AT4A6NND4 320 aa2.32□□□□□ -2.04
SMNDC1-205ENST00000477763 TMEM114B3SHH9 223 aa2.32□□□□□ -2.04
SMNDC1-205ENST00000477763 FTCDNL1E5RQL4 147 aa2.32□□□□□ -2.04
SMNDC1-205ENST00000477763 UPK2O00526 184 aa2.32□□□□□ -2.04
SMNDC1-205ENST00000477763 CRXO43186 299 aaPredicted RBP2.32□□□□□ -2.04
SMNDC1-205ENST00000477763 ATP8B1O43520 1251 aa2.32□□□□□ -2.04
SMNDC1-205ENST00000477763 DENRO43583 198 aaKnown RBP2.32□□□□□ -2.04
SMNDC1-205ENST00000477763 HPGDSO60760 199 aa2.32□□□□□ -2.04
SMNDC1-205ENST00000477763 DHRS3O75911 302 aa2.32□□□□□ -2.04
SMNDC1-205ENST00000477763 FSTL3O95633 263 aa2.32□□□□□ -2.04
SMNDC1-205ENST00000477763 RAB36O95755 333 aa2.32□□□□□ -2.04
SMNDC1-205ENST00000477763 ASS1P00966 412 aaKnown RBP2.32□□□□□ -2.04
SMNDC1-205ENST00000477763 IGKV1D-16P01601 117 aa2.32□□□□□ -2.04
SMNDC1-205ENST00000477763 HLA-AP01891 365 aaKnown RBP2.32□□□□□ -2.04
SMNDC1-205ENST00000477763 APOEP02649 317 aa2.32□□□□□ -2.04
SMNDC1-205ENST00000477763 RLN2P04090 185 aa2.32□□□□□ -2.04
SMNDC1-205ENST00000477763 ZNF35P13682 527 aa2.32□□□□□ -2.04
SMNDC1-205ENST00000477763 SLC6A1P30531 599 aa2.32□□□□□ -2.04
SMNDC1-205ENST00000477763 SERPINB9P50453 376 aa2.32□□□□□ -2.04
SMNDC1-205ENST00000477763 RAB14P61106 215 aa2.32□□□□□ -2.04
SMNDC1-205ENST00000477763 BAMBIQ13145 260 aa2.32□□□□□ -2.04
SMNDC1-205ENST00000477763 LINC00303Q3SY05 128 aa2.32□□□□□ -2.04
SMNDC1-205ENST00000477763 Q6ZT83 130 aa2.32□□□□□ -2.04
SMNDC1-205ENST00000477763 FA2HQ7L5A8 372 aa2.32□□□□□ -2.04
SMNDC1-205ENST00000477763 FAM19A1Q7Z5A9 133 aa2.32□□□□□ -2.04
SMNDC1-205ENST00000477763 SLC13A5Q86YT5 568 aaPredicted RBP2.32□□□□□ -2.04
SMNDC1-205ENST00000477763 ATPAF2Q8N5M1 289 aa2.32□□□□□ -2.04
SMNDC1-205ENST00000477763 OR5L1Q8NGL2 311 aa2.32□□□□□ -2.04
SMNDC1-205ENST00000477763 ACTL9Q8TC94 416 aa2.32□□□□□ -2.04
SMNDC1-205ENST00000477763 DYNC2LI1Q8TCX1 351 aa2.32□□□□□ -2.04
SMNDC1-205ENST00000477763 C22orf15Q8WYQ4 148 aa2.32□□□□□ -2.04
SMNDC1-205ENST00000477763 RBPMSQ93062 196 aaKnown RBP2.32□□□□□ -2.04
SMNDC1-205ENST00000477763 ADTRPQ96IZ2 230 aa2.32□□□□□ -2.04
SMNDC1-205ENST00000477763 PPP1R36Q96LQ0 422 aa2.32□□□□□ -2.04
SMNDC1-205ENST00000477763 MBOAT7Q96N66 472 aa2.32□□□□□ -2.04
SMNDC1-205ENST00000477763 FAM60AQ9NP50 221 aa2.32□□□□□ -2.04
SMNDC1-205ENST00000477763 ACOT13Q9NPJ3 140 aa2.32□□□□□ -2.04
SMNDC1-205ENST00000477763 SPANXB1Q9NS25 103 aaPredicted RBP2.32□□□□□ -2.04
SMNDC1-205ENST00000477763 DDIT4Q9NX09 232 aa2.32□□□□□ -2.04
SMNDC1-205ENST00000477763 PAQR5Q9NXK6 330 aaPredicted RBP2.32□□□□□ -2.04
SMNDC1-205ENST00000477763 ZNF337Q9Y3M9 751 aa2.32□□□□□ -2.04
SMNDC1-205ENST00000477763 RAB3GAP2Q9H2M9 1393 aa2.32□□□□□ -2.04
SMNDC1-205ENST00000477763 TICRRQ7Z2Z1 1910 aa2.31□□□□□ -2.04
SMNDC1-205ENST00000477763 LOC389332A0A1B0GUA5 103 aa2.31□□□□□ -2.04
SMNDC1-205ENST00000477763 A0A1W2PQL4 384 aaPredicted RBP2.31□□□□□ -2.04
SMNDC1-205ENST00000477763 C9J4A7 227 aa2.31□□□□□ -2.04
SMNDC1-205ENST00000477763 E5RI56 91 aa2.31□□□□□ -2.04
SMNDC1-205ENST00000477763 FGF16O43320 207 aa2.31□□□□□ -2.04
SMNDC1-205ENST00000477763 SLC37A4O43826 429 aa2.31□□□□□ -2.04
SMNDC1-205ENST00000477763 COX7A2P2O60397 106 aa2.31□□□□□ -2.04
SMNDC1-205ENST00000477763 NQO1P15559 274 aaKnown RBP2.31□□□□□ -2.04
SMNDC1-205ENST00000477763 PRPS1L1P21108 318 aa2.31□□□□□ -2.04
SMNDC1-205ENST00000477763 MSNP26038 577 aaKnown RBP2.31□□□□□ -2.04
SMNDC1-205ENST00000477763 CBX5P45973 191 aa2.31□□□□□ -2.04
SMNDC1-205ENST00000477763 CAPZBP47756 277 aa2.31□□□□□ -2.04
SMNDC1-205ENST00000477763 RAP1GDS1P52306 607 aa2.31□□□□□ -2.04
SMNDC1-205ENST00000477763 STC1P52823 247 aa2.31□□□□□ -2.04
SMNDC1-205ENST00000477763 ARPC4P59998 168 aa2.31□□□□□ -2.04
SMNDC1-205ENST00000477763 CXCR4P61073 352 aa2.31□□□□□ -2.04
SMNDC1-205ENST00000477763 ERVS71-1P61550 626 aa2.31□□□□□ -2.04
SMNDC1-205ENST00000477763 CCL7P80098 99 aa2.31□□□□□ -2.04
SMNDC1-205ENST00000477763 MGAT3Q09327 533 aa2.31□□□□□ -2.04
SMNDC1-205ENST00000477763 STX4Q12846 297 aa2.31□□□□□ -2.04
SMNDC1-205ENST00000477763 RAB31Q13636 194 aa2.31□□□□□ -2.04
SMNDC1-205ENST00000477763 TMED2Q15363 201 aa2.31□□□□□ -2.04
SMNDC1-205ENST00000477763 GUSBP1Q15486 140 aa2.31□□□□□ -2.04
SMNDC1-205ENST00000477763 SSX1Q16384 188 aa2.31□□□□□ -2.04
SMNDC1-205ENST00000477763 PDZD11Q5EBL8 140 aa2.31□□□□□ -2.04
SMNDC1-205ENST00000477763 CLLU1OSQ5K130 101 aa2.31□□□□□ -2.04
SMNDC1-205ENST00000477763 CLEC12AQ5QGZ9 265 aa2.31□□□□□ -2.04
SMNDC1-205ENST00000477763 OGFRL1Q5TC84 451 aaPredicted RBP2.31□□□□□ -2.04
SMNDC1-205ENST00000477763 LPCAT4Q643R3 524 aa2.31□□□□□ -2.04
SMNDC1-205ENST00000477763 FAM45BPQ6NSW5 357 aa2.31□□□□□ -2.04
SMNDC1-205ENST00000477763 PRNTQ86SH4 94 aa2.31□□□□□ -2.04
SMNDC1-205ENST00000477763 AKAP14Q86UN6 197 aa2.31□□□□□ -2.04
SMNDC1-205ENST00000477763 HS3ST5Q8IZT8 346 aa2.31□□□□□ -2.04
SMNDC1-205ENST00000477763 LINC00337Q8N6G1 96 aa2.31□□□□□ -2.04
SMNDC1-205ENST00000477763 ACBD4Q8NC06 268 aa2.31□□□□□ -2.04
SMNDC1-205ENST00000477763 ZNF555Q8NEP9 628 aa2.31□□□□□ -2.04
SMNDC1-205ENST00000477763 FAM45AQ8TCE6 357 aa2.31□□□□□ -2.04
SMNDC1-205ENST00000477763 OR5P2Q8WZ92 322 aa2.31□□□□□ -2.04
SMNDC1-205ENST00000477763 PTH2Q96A98 100 aa2.31□□□□□ -2.04
SMNDC1-205ENST00000477763 PPWD1Q96BP3 646 aaKnown RBP2.31□□□□□ -2.04
SMNDC1-205ENST00000477763 APOL4Q9BPW4 351 aa2.31□□□□□ -2.04
SMNDC1-205ENST00000477763 DSN1Q9H410 356 aa2.31□□□□□ -2.04
SMNDC1-205ENST00000477763 ASB7Q9H672 318 aa2.31□□□□□ -2.04
SMNDC1-205ENST00000477763 VSIRQ9H7M9 311 aa2.31□□□□□ -2.04
SMNDC1-205ENST00000477763 IFT46Q9NQC8 304 aa2.31□□□□□ -2.04
SMNDC1-205ENST00000477763 TMEM38BQ9NVV0 291 aa2.31□□□□□ -2.04
SMNDC1-205ENST00000477763 MTCH2Q9Y6C9 303 aa2.31□□□□□ -2.04
SMNDC1-205ENST00000477763 ADGRL3Q9HAR2 1447 aa2.31□□□□□ -2.04
SMNDC1-205ENST00000477763 CECR2Q9BXF3 1484 aa2.31□□□□□ -2.04
SMNDC1-205ENST00000477763 MUC19Q7Z5P9 8384 aa2.3□□□□□ -2.04
SMNDC1-205ENST00000477763 A0A1W2PRG6 482 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 228 ms