RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 ZNF878C9JN71 531 aa2.94□□□□□ -1.94
UBR3-209ENST00000477461 F5H5K5 113 aa2.94□□□□□ -1.94
UBR3-209ENST00000477461 J3QLW9 94 aa2.94□□□□□ -1.94
UBR3-209ENST00000477461 M0R1B8 84 aa2.94□□□□□ -1.94
UBR3-209ENST00000477461 ARPC1BO15143 372 aaKnown RBP2.94□□□□□ -1.94
UBR3-209ENST00000477461 RER1O15258 196 aa2.94□□□□□ -1.94
UBR3-209ENST00000477461 ZNF254O75437 659 aa2.94□□□□□ -1.94
UBR3-209ENST00000477461 KBTBD11O94819 623 aa2.94□□□□□ -1.94
UBR3-209ENST00000477461 RPP14O95059 124 aaKnown RBP2.94□□□□□ -1.94
UBR3-209ENST00000477461 GOSR1O95249 250 aa2.94□□□□□ -1.94
UBR3-209ENST00000477461 HLA-HP01893 362 aa2.94□□□□□ -1.94
UBR3-209ENST00000477461 CDK1P06493 297 aa2.94□□□□□ -1.94
UBR3-209ENST00000477461 FCER2P06734 321 aa2.94□□□□□ -1.94
UBR3-209ENST00000477461 SFTPBP07988 381 aa2.94□□□□□ -1.94
UBR3-209ENST00000477461 RPSAP08865 295 aaKnown RBP2.94□□□□□ -1.94
UBR3-209ENST00000477461 HTR1AP08908 422 aa2.94□□□□□ -1.94
UBR3-209ENST00000477461 CBR1P16152 277 aa2.94□□□□□ -1.94
UBR3-209ENST00000477461 ZNF19P17023 458 aa2.94□□□□□ -1.94
UBR3-209ENST00000477461 ALOX5APP20292 161 aa2.94□□□□□ -1.94
UBR3-209ENST00000477461 CCNOP22674 350 aa2.94□□□□□ -1.94
UBR3-209ENST00000477461 CRHBPP24387 322 aa2.94□□□□□ -1.94
UBR3-209ENST00000477461 UGT2B10P36537 528 aa2.94□□□□□ -1.94
UBR3-209ENST00000477461 RPS27P42677 84 aaKnown RBP2.94□□□□□ -1.94
UBR3-209ENST00000477461 HTR5AP47898 357 aa2.94□□□□□ -1.94
UBR3-209ENST00000477461 GDI2P50395 445 aaKnown RBP2.94□□□□□ -1.94
UBR3-209ENST00000477461 ZNF83P51522 516 aa2.94□□□□□ -1.94
UBR3-209ENST00000477461 IDH3GP51553 393 aaPredicted RBP2.94□□□□□ -1.94
UBR3-209ENST00000477461 GBX2P52951 348 aaPredicted RBP2.94□□□□□ -1.94
UBR3-209ENST00000477461 HCCSP53701 268 aa2.94□□□□□ -1.94
UBR3-209ENST00000477461 UCP2P55851 309 aa2.94□□□□□ -1.94
UBR3-209ENST00000477461 TAS2R43P59537 309 aa2.94□□□□□ -1.94
UBR3-209ENST00000477461 GRB2P62993 217 aaKnown RBP2.94□□□□□ -1.94
UBR3-209ENST00000477461 SLC35A2P78381 396 aa2.94□□□□□ -1.94
UBR3-209ENST00000477461 GALK2Q01415 458 aa2.94□□□□□ -1.94
UBR3-209ENST00000477461 MRPL28Q13084 256 aaKnown RBP2.94□□□□□ -1.94
UBR3-209ENST00000477461 ENDOGQ14249 297 aaKnown RBP2.94□□□□□ -1.94
UBR3-209ENST00000477461 P2RY14Q15391 338 aa2.94□□□□□ -1.94
UBR3-209ENST00000477461 TBC1D28Q2M2D7 210 aa2.94□□□□□ -1.94
UBR3-209ENST00000477461 ZNF829Q3KNS6 432 aaPredicted RBP2.94□□□□□ -1.94
UBR3-209ENST00000477461 FBXL19-AS1Q494R0 122 aa2.94□□□□□ -1.94
UBR3-209ENST00000477461 KCTD21Q4G0X4 260 aa2.94□□□□□ -1.94
UBR3-209ENST00000477461 TP53I3Q53FA7 332 aa2.94□□□□□ -1.94
UBR3-209ENST00000477461 PABPC1L2AQ5JQF8 200 aa2.94□□□□□ -1.94
UBR3-209ENST00000477461 TIMM23BQ5SRD1 257 aa2.94□□□□□ -1.94
UBR3-209ENST00000477461 DDI2Q5TDH0 399 aa2.94□□□□□ -1.94
UBR3-209ENST00000477461 ARL9Q6T311 187 aa2.94□□□□□ -1.94
UBR3-209ENST00000477461 UGT2A3Q6UWM9 527 aa2.94□□□□□ -1.94
UBR3-209ENST00000477461 LRRN1Q6UXK5 716 aa2.94□□□□□ -1.94
UBR3-209ENST00000477461 STAC2Q6ZMT1 411 aa2.94□□□□□ -1.94
UBR3-209ENST00000477461 Q6ZRG5 221 aa2.94□□□□□ -1.94
UBR3-209ENST00000477461 PRSS48Q7RTY5 328 aa2.94□□□□□ -1.94
UBR3-209ENST00000477461 LHFPL3Q86UP9 236 aa2.94□□□□□ -1.94
UBR3-209ENST00000477461 MDP1Q86V88 176 aa2.94□□□□□ -1.94
UBR3-209ENST00000477461 ZNF679Q8IYX0 411 aa2.94□□□□□ -1.94
UBR3-209ENST00000477461 ZNF283Q8N7M2 679 aa2.94□□□□□ -1.94
UBR3-209ENST00000477461 OR1F12Q8NHA8 337 aa2.94□□□□□ -1.94
UBR3-209ENST00000477461 AKR7LQ8NHP1 331 aa2.94□□□□□ -1.94
UBR3-209ENST00000477461 HAVCR2Q8TDQ0 301 aa2.94□□□□□ -1.94
UBR3-209ENST00000477461 ITLN2Q8WWU7 325 aaPredicted RBP2.94□□□□□ -1.94
UBR3-209ENST00000477461 RORBQ92753 470 aa2.94□□□□□ -1.94
UBR3-209ENST00000477461 SPTSSAQ969W0 71 aa2.94□□□□□ -1.94
UBR3-209ENST00000477461 S100PBPQ96BU1 408 aa2.94□□□□□ -1.94
UBR3-209ENST00000477461 SLAMF6Q96DU3 332 aa2.94□□□□□ -1.94
UBR3-209ENST00000477461 OR8B4Q96RC9 309 aa2.94□□□□□ -1.94
UBR3-209ENST00000477461 COQ7Q99807 217 aa2.94□□□□□ -1.94
UBR3-209ENST00000477461 MND1Q9BWT6 205 aa2.94□□□□□ -1.94
UBR3-209ENST00000477461 C1QTNF6Q9BXI9 259 aa2.94□□□□□ -1.94
UBR3-209ENST00000477461 OR2H1Q9GZK4 316 aa2.94□□□□□ -1.94
UBR3-209ENST00000477461 DUSP21Q9H596 190 aa2.94□□□□□ -1.94
UBR3-209ENST00000477461 NIPAL2Q9H841 368 aa2.94□□□□□ -1.94
UBR3-209ENST00000477461 Q9HAA7 133 aa2.94□□□□□ -1.94
UBR3-209ENST00000477461 ELOVL3Q9HB03 270 aa2.94□□□□□ -1.94
UBR3-209ENST00000477461 ERVK-18Q9QC07 812 aa2.94□□□□□ -1.94
UBR3-209ENST00000477461 EIF3KQ9UBQ5 218 aaKnown RBP2.94□□□□□ -1.94
UBR3-209ENST00000477461 CYB5R1Q9UHQ9 305 aa2.94□□□□□ -1.94
UBR3-209ENST00000477461 GNG8Q9UK08 70 aa2.94□□□□□ -1.94
UBR3-209ENST00000477461 CAB39Q9Y376 341 aaPredicted RBP2.94□□□□□ -1.94
UBR3-209ENST00000477461 N6AMT1Q9Y5N5 214 aa2.94□□□□□ -1.94
UBR3-209ENST00000477461 LHFPL6Q9Y693 200 aa2.94□□□□□ -1.94
UBR3-209ENST00000477461 SPTBN1Q01082 2364 aaKnown RBP2.93□□□□□ -1.94
UBR3-209ENST00000477461 A0A1W2PRV1 198 aa2.93□□□□□ -1.94
UBR3-209ENST00000477461 SMIM30A4D0T7 59 aa2.93□□□□□ -1.94
UBR3-209ENST00000477461 C5orf49A4QMS7 147 aa2.93□□□□□ -1.94
UBR3-209ENST00000477461 C5orf51A6NDU8 294 aa2.93□□□□□ -1.94
UBR3-209ENST00000477461 LOC110117498-PIK3R3F6TDL0 507 aa2.93□□□□□ -1.94
UBR3-209ENST00000477461 M0R135 149 aa2.93□□□□□ -1.94
UBR3-209ENST00000477461 SULT1C4O75897 302 aa2.93□□□□□ -1.94
UBR3-209ENST00000477461 SERPINA5P05154 406 aa2.93□□□□□ -1.94
UBR3-209ENST00000477461 MMP7P09237 267 aaPredicted RBP2.93□□□□□ -1.94
UBR3-209ENST00000477461 OR9G9P0C7N8 305 aa2.93□□□□□ -1.94
UBR3-209ENST00000477461 LIMS3P0CW19 117 aa2.93□□□□□ -1.94
UBR3-209ENST00000477461 LIMS4P0CW20 117 aa2.93□□□□□ -1.94
UBR3-209ENST00000477461 HSMCR30P0CW71 290 aa2.93□□□□□ -1.94
UBR3-209ENST00000477461 COX5BP10606 129 aa2.93□□□□□ -1.94
UBR3-209ENST00000477461 ATP6V1B1P15313 513 aa2.93□□□□□ -1.94
UBR3-209ENST00000477461 STOMP27105 288 aa2.93□□□□□ -1.94
UBR3-209ENST00000477461 PSMB9P28065 219 aa2.93□□□□□ -1.94
UBR3-209ENST00000477461 ID1P41134 155 aa2.93□□□□□ -1.94
UBR3-209ENST00000477461 MAP2K4P45985 399 aa2.93□□□□□ -1.94
UBR3-209ENST00000477461 CX3CR1P49238 355 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms