RNA–Protein interactions for RNA: ENST00000475997.6

HNRNPU-208, Transcript of heterogeneous nuclear ribonucleoprotein U, human

TSL 5

Gene HNRNPU, Length 5,290 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HNRNPU-208	ENST00000475997	RIPPLY2	Q5TAB7	128 aa		5.41	□□□□□ -1.54
HNRNPU-208	ENST00000475997	PWWP2B	Q6NUJ5	590 aa		5.41	□□□□□ -1.54
HNRNPU-208	ENST00000475997	TRAT1	Q6PIZ9	186 aa		5.41	□□□□□ -1.54
HNRNPU-208	ENST00000475997	ZDHHC23	Q8IYP9	409 aa		5.41	□□□□□ -1.54
HNRNPU-208	ENST00000475997	OR5AS1	Q8N127	324 aa		5.41	□□□□□ -1.54
HNRNPU-208	ENST00000475997	ZNF687	Q8N1G0	1237 aa		5.41	□□□□□ -1.54
HNRNPU-208	ENST00000475997	C17orf78	Q8N4C9	275 aa		5.41	□□□□□ -1.54
HNRNPU-208	ENST00000475997	OR1N2	Q8NGR9	330 aa		5.41	□□□□□ -1.54
HNRNPU-208	ENST00000475997	MRPS16	Q9Y3D3	137 aa	Known RBP	5.41	□□□□□ -1.54
HNRNPU-208	ENST00000475997	ANAPC1	Q9H1A4	1944 aa		5.41	□□□□□ -1.54
HNRNPU-208	ENST00000475997	ADAM20	O43506	726 aa		5.4	□□□□□ -1.54
HNRNPU-208	ENST00000475997	PTP4A3	O75365	173 aa		5.4	□□□□□ -1.54
HNRNPU-208	ENST00000475997	TSPAN13	O95857	204 aa		5.4	□□□□□ -1.54
HNRNPU-208	ENST00000475997	THY1	P04216	161 aa		5.4	□□□□□ -1.54
HNRNPU-208	ENST00000475997	CTSD	P07339	412 aa	Predicted RBP	5.4	□□□□□ -1.54
HNRNPU-208	ENST00000475997	KIR2DL1	P43626	348 aa	Predicted RBP	5.4	□□□□□ -1.54
HNRNPU-208	ENST00000475997	KIR2DL2	P43627	348 aa	Predicted RBP	5.4	□□□□□ -1.54
HNRNPU-208	ENST00000475997	KIR2DS2	P43631	304 aa		5.4	□□□□□ -1.54
HNRNPU-208	ENST00000475997	IER3	P46695	156 aa		5.4	□□□□□ -1.54
HNRNPU-208	ENST00000475997	NMU	P48645	174 aa		5.4	□□□□□ -1.54
HNRNPU-208	ENST00000475997	UBE2L3	P68036	154 aa	Known RBP	5.4	□□□□□ -1.54
HNRNPU-208	ENST00000475997	SMIM21	Q3B7S5	101 aa		5.4	□□□□□ -1.54
HNRNPU-208	ENST00000475997		Q5PR19	223 aa		5.4	□□□□□ -1.54
HNRNPU-208	ENST00000475997	DEGS2	Q6QHC5	323 aa		5.4	□□□□□ -1.54
HNRNPU-208	ENST00000475997	TMEM136	Q6ZRR5	245 aa		5.4	□□□□□ -1.54
HNRNPU-208	ENST00000475997	SLC25A26	Q70HW3	274 aa		5.4	□□□□□ -1.54
HNRNPU-208	ENST00000475997	OPN3	Q9H1Y3	402 aa	Predicted RBP	5.4	□□□□□ -1.54
HNRNPU-208	ENST00000475997	FAM60A	Q9NP50	221 aa		5.4	□□□□□ -1.54
HNRNPU-208	ENST00000475997	ZNF275	Q9NSD4	429 aa	Predicted RBP	5.4	□□□□□ -1.54
HNRNPU-208	ENST00000475997		A0A087WUJ7	227 aa		5.4	□□□□□ -1.54
HNRNPU-208	ENST00000475997	GLRA1	P23415	457 aa		5.4	□□□□□ -1.54
HNRNPU-208	ENST00000475997	COL8A1	P27658	744 aa		5.4	□□□□□ -1.54
HNRNPU-208	ENST00000475997	GUCA2A	Q02747	115 aa		5.4	□□□□□ -1.54
HNRNPU-208	ENST00000475997	RPL18	Q07020	188 aa	Known RBP	5.4	□□□□□ -1.54
HNRNPU-208	ENST00000475997	MPV17L	Q2QL34	196 aa		5.4	□□□□□ -1.54
HNRNPU-208	ENST00000475997	ZNF766	Q5HY98	468 aa		5.4	□□□□□ -1.54
HNRNPU-208	ENST00000475997	TMEM255A	Q5JRV8	349 aa		5.4	□□□□□ -1.54
HNRNPU-208	ENST00000475997	PDPN	Q86YL7	162 aa		5.4	□□□□□ -1.54
HNRNPU-208	ENST00000475997	TGIF2LX	Q8IUE1	241 aa		5.4	□□□□□ -1.54
HNRNPU-208	ENST00000475997	RFLNB	Q8N5W9	214 aa		5.4	□□□□□ -1.54
HNRNPU-208	ENST00000475997	OR8A1	Q8NGG7	326 aa		5.4	□□□□□ -1.54
HNRNPU-208	ENST00000475997	DNAJB12	Q9NXW2	375 aa	Known RBP	5.4	□□□□□ -1.54
HNRNPU-208	ENST00000475997	METTL1	Q9UBP6	276 aa	Known RBP	5.4	□□□□□ -1.54
HNRNPU-208	ENST00000475997	PSG11	Q9UQ72	335 aa		5.4	□□□□□ -1.54
HNRNPU-208	ENST00000475997	DOCK9	Q9BZ29	2069 aa		5.4	□□□□□ -1.54
HNRNPU-208	ENST00000475997	CTXND1	A0A1B0GTU2	59 aa		5.4	□□□□□ -1.55
HNRNPU-208	ENST00000475997		A0A1W2PPC4	97 aa		5.4	□□□□□ -1.55
HNRNPU-208	ENST00000475997	TMEM30CP	A0ZSE6	113 aa		5.4	□□□□□ -1.55
HNRNPU-208	ENST00000475997	ZNF729	A6NN14	1252 aa	Predicted RBP	5.4	□□□□□ -1.55
HNRNPU-208	ENST00000475997	HRK	O00198	91 aa		5.4	□□□□□ -1.55
HNRNPU-208	ENST00000475997	SIRPB1	O00241	398 aa		5.4	□□□□□ -1.55
HNRNPU-208	ENST00000475997	LINC01565	O15544	149 aa		5.4	□□□□□ -1.55
HNRNPU-208	ENST00000475997	CDS2	O95674	445 aa		5.4	□□□□□ -1.55
HNRNPU-208	ENST00000475997	ONECUT2	O95948	504 aa		5.4	□□□□□ -1.55
HNRNPU-208	ENST00000475997	COL9A1	P20849	921 aa		5.4	□□□□□ -1.55
HNRNPU-208	ENST00000475997	GNB1	P62873	340 aa		5.4	□□□□□ -1.55
HNRNPU-208	ENST00000475997	PSG6	Q00889	435 aa		5.4	□□□□□ -1.55
HNRNPU-208	ENST00000475997	PRDX4	Q13162	271 aa		5.4	□□□□□ -1.55
HNRNPU-208	ENST00000475997	KCNAB1	Q14722	419 aa		5.4	□□□□□ -1.55
HNRNPU-208	ENST00000475997	NR0B2	Q15466	257 aa		5.4	□□□□□ -1.55
HNRNPU-208	ENST00000475997	HFE	Q30201	348 aa		5.4	□□□□□ -1.55
HNRNPU-208	ENST00000475997	ZNF880	Q6PDB4	577 aa		5.4	□□□□□ -1.55
HNRNPU-208	ENST00000475997	TMEM65	Q6PI78	240 aa		5.4	□□□□□ -1.55
HNRNPU-208	ENST00000475997	MARCH3	Q86UD3	253 aa		5.4	□□□□□ -1.55
HNRNPU-208	ENST00000475997	H1FOO	Q8IZA3	346 aa	Predicted RBP	5.4	□□□□□ -1.55
HNRNPU-208	ENST00000475997	FAM181A	Q8N9Y4	354 aa		5.4	□□□□□ -1.55
HNRNPU-208	ENST00000475997	GRAMD2B	Q96HH9	432 aa		5.4	□□□□□ -1.55
HNRNPU-208	ENST00000475997	DUSP23	Q9BVJ7	150 aa		5.4	□□□□□ -1.55
HNRNPU-208	ENST00000475997	RSPO3	Q9BXY4	272 aa	Predicted RBP	5.4	□□□□□ -1.55
HNRNPU-208	ENST00000475997	KCNE5	Q9UJ90	142 aa		5.4	□□□□□ -1.55
HNRNPU-208	ENST00000475997	KCNK7	Q9Y2U2	307 aa		5.4	□□□□□ -1.55
HNRNPU-208	ENST00000475997	C3orf85	A0A1B0GTC6	90 aa		5.4	□□□□□ -1.55
HNRNPU-208	ENST00000475997	VDAC1	P21796	283 aa		5.4	□□□□□ -1.55
HNRNPU-208	ENST00000475997	CDKN2A	P42771	156 aa	Known RBP	5.4	□□□□□ -1.55
HNRNPU-208	ENST00000475997	UQCRFS1	P47985	274 aa		5.4	□□□□□ -1.55
HNRNPU-208	ENST00000475997	GNG10	P50151	68 aa		5.4	□□□□□ -1.55
HNRNPU-208	ENST00000475997	MRPS21	P82921	87 aa	Known RBP	5.4	□□□□□ -1.55
HNRNPU-208	ENST00000475997	MRPL54	Q6P161	138 aa	Known RBP	5.4	□□□□□ -1.55
HNRNPU-208	ENST00000475997	VHLL	Q6RSH7	139 aa		5.4	□□□□□ -1.55
HNRNPU-208	ENST00000475997	ROBO4	Q8WZ75	1007 aa		5.4	□□□□□ -1.55
HNRNPU-208	ENST00000475997	VOPP1	Q96AW1	172 aa		5.4	□□□□□ -1.55
HNRNPU-208	ENST00000475997	CLDN23	Q96B33	292 aa		5.4	□□□□□ -1.55
HNRNPU-208	ENST00000475997	ELSPBP1	Q96BH3	223 aa		5.4	□□□□□ -1.55
HNRNPU-208	ENST00000475997	LAT2	Q9GZY6	243 aa		5.4	□□□□□ -1.55
HNRNPU-208	ENST00000475997	SEBOX	Q9HB31	216 aa	Predicted RBP	5.4	□□□□□ -1.55
HNRNPU-208	ENST00000475997	THYN1	Q9P016	225 aa		5.4	□□□□□ -1.55
HNRNPU-208	ENST00000475997	NTM	Q9P121	344 aa		5.4	□□□□□ -1.55
HNRNPU-208	ENST00000475997	ZDHHC8	Q9ULC8	765 aa		5.4	□□□□□ -1.55
HNRNPU-208	ENST00000475997	RELB	Q01201	579 aa		5.39	□□□□□ -1.55
HNRNPU-208	ENST00000475997	PRTG	Q2VWP7	1150 aa		5.39	□□□□□ -1.55
HNRNPU-208	ENST00000475997	ZNF658B	Q4V348	819 aa	Predicted RBP	5.39	□□□□□ -1.55
HNRNPU-208	ENST00000475997	NHLRC1	Q6VVB1	395 aa		5.39	□□□□□ -1.55
HNRNPU-208	ENST00000475997	MRGPRE	Q86SM8	312 aa		5.39	□□□□□ -1.55
HNRNPU-208	ENST00000475997	MRPL30	Q8TCC3	161 aa	Known RBP	5.39	□□□□□ -1.55
HNRNPU-208	ENST00000475997	CFHR5	Q9BXR6	569 aa		5.39	□□□□□ -1.55
HNRNPU-208	ENST00000475997	MS4A7	Q9GZW8	240 aa	Predicted RBP	5.39	□□□□□ -1.55
HNRNPU-208	ENST00000475997	CRISPLD2	Q9H0B8	497 aa		5.39	□□□□□ -1.55
HNRNPU-208	ENST00000475997	RCC2	Q9P258	522 aa	Known RBP	5.39	□□□□□ -1.55
HNRNPU-208	ENST00000475997	C7orf66	A4D0T2	115 aa		5.39	□□□□□ -1.55
HNRNPU-208	ENST00000475997	FAM221A	A4D161	298 aa		5.39	□□□□□ -1.55

Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms