RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 THRSPQ92748 146 aa4.62□□□□□ -1.67
HDAC3-206ENST00000471968 ZNF251Q9BRH9 671 aa4.62□□□□□ -1.67
HDAC3-206ENST00000471968 OR10A2Q9H208 303 aa4.62□□□□□ -1.67
HDAC3-206ENST00000471968 PPCSQ9HAB8 311 aa4.62□□□□□ -1.67
HDAC3-206ENST00000471968 DNAJC27Q9NZQ0 273 aa4.62□□□□□ -1.67
HDAC3-206ENST00000471968 FAM30AQ9NZY2 134 aa4.62□□□□□ -1.67
HDAC3-206ENST00000471968 PSMC3IPQ9P2W1 217 aaPredicted RBP4.62□□□□□ -1.67
HDAC3-206ENST00000471968 B9D1Q9UPM9 204 aa4.62□□□□□ -1.67
HDAC3-206ENST00000471968 KBTBD11-OT1A0A1B0GTJ5 212 aa4.61□□□□□ -1.67
HDAC3-206ENST00000471968 TLDC2A0PJX2 215 aa4.61□□□□□ -1.67
HDAC3-206ENST00000471968 ODAMA1E959 279 aa4.61□□□□□ -1.67
HDAC3-206ENST00000471968 NBR2O15453 112 aa4.61□□□□□ -1.67
HDAC3-206ENST00000471968 RS1O15537 224 aa4.61□□□□□ -1.67
HDAC3-206ENST00000471968 INMTO95050 263 aa4.61□□□□□ -1.67
HDAC3-206ENST00000471968 SEMG1P04279 462 aa4.61□□□□□ -1.67
HDAC3-206ENST00000471968 ABHD2P08910 425 aa4.61□□□□□ -1.67
HDAC3-206ENST00000471968 DNAH10OSP0CZ25 163 aa4.61□□□□□ -1.67
HDAC3-206ENST00000471968 AADACP22760 399 aa4.61□□□□□ -1.67
HDAC3-206ENST00000471968 DUSP1P28562 367 aa4.61□□□□□ -1.67
HDAC3-206ENST00000471968 IL12AP29459 219 aa4.61□□□□□ -1.67
HDAC3-206ENST00000471968 ELLP55199 621 aaPredicted RBP4.61□□□□□ -1.67
HDAC3-206ENST00000471968 TAS2R41P59536 307 aa4.61□□□□□ -1.67
HDAC3-206ENST00000471968 UFM1P61960 85 aa4.61□□□□□ -1.67
HDAC3-206ENST00000471968 VSNL1P62760 191 aa4.61□□□□□ -1.67
HDAC3-206ENST00000471968 SCARB2Q14108 478 aa4.61□□□□□ -1.67
HDAC3-206ENST00000471968 TTC32Q5I0X7 151 aa4.61□□□□□ -1.67
HDAC3-206ENST00000471968 GCNT6Q5T4J0 391 aa4.61□□□□□ -1.67
HDAC3-206ENST00000471968 ADCK1Q86TW2 530 aa4.61□□□□□ -1.67
HDAC3-206ENST00000471968 ZNF573Q86YE8 665 aa4.61□□□□□ -1.67
HDAC3-206ENST00000471968 RNF148Q8N7C7 305 aa4.61□□□□□ -1.67
HDAC3-206ENST00000471968 UXS1Q8NBZ7 420 aa4.61□□□□□ -1.67
HDAC3-206ENST00000471968 OR5T1Q8NG75 326 aa4.61□□□□□ -1.67
HDAC3-206ENST00000471968 FAM81AQ8TBF8 368 aa4.61□□□□□ -1.67
HDAC3-206ENST00000471968 SLAMF6Q96DU3 332 aa4.61□□□□□ -1.67
HDAC3-206ENST00000471968 PGAM5Q96HS1 289 aa4.61□□□□□ -1.67
HDAC3-206ENST00000471968 AKTIPQ9H8T0 292 aa4.61□□□□□ -1.67
HDAC3-206ENST00000471968 KRT84Q9NSB2 600 aa4.61□□□□□ -1.67
HDAC3-206ENST00000471968 MRPL22Q9NWU5 206 aaKnown RBP4.61□□□□□ -1.67
HDAC3-206ENST00000471968 IL36RNQ9UBH0 155 aa4.61□□□□□ -1.67
HDAC3-206ENST00000471968 ZNF180Q9UJW8 692 aa4.61□□□□□ -1.67
HDAC3-206ENST00000471968 DHDHQ9UQ10 334 aa4.61□□□□□ -1.67
HDAC3-206ENST00000471968 GAB2Q9UQC2 676 aa4.61□□□□□ -1.67
HDAC3-206ENST00000471968 FUOMA2VDF0 154 aa4.6□□□□□ -1.67
HDAC3-206ENST00000471968 EFCAB9A8MZ26 197 aa4.6□□□□□ -1.67
HDAC3-206ENST00000471968 LOC110117498-PIK3R3F6TDL0 507 aa4.6□□□□□ -1.67
HDAC3-206ENST00000471968 SIRPB1O00241 398 aa4.6□□□□□ -1.67
HDAC3-206ENST00000471968 COPEO14579 308 aa4.6□□□□□ -1.67
HDAC3-206ENST00000471968 RIPK2O43353 540 aa4.6□□□□□ -1.67
HDAC3-206ENST00000471968 CSTBP04080 98 aaKnown RBP4.6□□□□□ -1.67
HDAC3-206ENST00000471968 ZCCHC18P0CG32 403 aa4.6□□□□□ -1.67
HDAC3-206ENST00000471968 PSKH1P11801 424 aa4.6□□□□□ -1.67
HDAC3-206ENST00000471968 HTN3P15516 51 aa4.6□□□□□ -1.67
HDAC3-206ENST00000471968 HSD11B1P28845 292 aa4.6□□□□□ -1.67
HDAC3-206ENST00000471968 ZNF121P58317 390 aaPredicted RBP4.6□□□□□ -1.67
HDAC3-206ENST00000471968 FADDQ13158 208 aa4.6□□□□□ -1.67
HDAC3-206ENST00000471968 ODF1Q14990 250 aa4.6□□□□□ -1.67
HDAC3-206ENST00000471968 ANKDD1AQ495B1 522 aa4.6□□□□□ -1.67
HDAC3-206ENST00000471968 TMEM88Q6PEY1 159 aa4.6□□□□□ -1.67
HDAC3-206ENST00000471968 PRSS45Q7RTY3 260 aa4.6□□□□□ -1.67
HDAC3-206ENST00000471968 ACMSDQ8TDX5 336 aa4.6□□□□□ -1.67
HDAC3-206ENST00000471968 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.6□□□□□ -1.67
HDAC3-206ENST00000471968 RNF125Q96EQ8 232 aa4.6□□□□□ -1.67
HDAC3-206ENST00000471968 OSBPL10Q9BXB5 764 aa4.6□□□□□ -1.67
HDAC3-206ENST00000471968 RGCCQ9H4X1 137 aa4.6□□□□□ -1.67
HDAC3-206ENST00000471968 AIG1Q9NVV5 245 aa4.6□□□□□ -1.67
HDAC3-206ENST00000471968 IDI2-AS1Q9NZ38 188 aa4.6□□□□□ -1.67
HDAC3-206ENST00000471968 DCDC2Q9UHG0 476 aa4.6□□□□□ -1.67
HDAC3-206ENST00000471968 TRAV25A0A0B4J276 109 aa4.59□□□□□ -1.67
HDAC3-206ENST00000471968 ZNF878C9JN71 531 aa4.59□□□□□ -1.67
HDAC3-206ENST00000471968 H3BUA1 57 aa4.59□□□□□ -1.67
HDAC3-206ENST00000471968 CLIC1O00299 241 aa4.59□□□□□ -1.67
HDAC3-206ENST00000471968 FCN1O00602 326 aa4.59□□□□□ -1.67
HDAC3-206ENST00000471968 NDUFAB1O14561 156 aa4.59□□□□□ -1.67
HDAC3-206ENST00000471968 TRIM13O60858 407 aa4.59□□□□□ -1.67
HDAC3-206ENST00000471968 IGLV2-23P01705 113 aa4.59□□□□□ -1.67
HDAC3-206ENST00000471968 HLA-AP01891 365 aaKnown RBP4.59□□□□□ -1.67
HDAC3-206ENST00000471968 HTR1FP30939 366 aa4.59□□□□□ -1.67
HDAC3-206ENST00000471968 GLP1RP43220 463 aa4.59□□□□□ -1.67
HDAC3-206ENST00000471968 SNU13P55769 128 aaKnown RBP4.59□□□□□ -1.67
HDAC3-206ENST00000471968 ZNF91Q05481 1191 aa4.59□□□□□ -1.67
HDAC3-206ENST00000471968 PIN1Q13526 163 aaPredicted RBP4.59□□□□□ -1.67
HDAC3-206ENST00000471968 CCDC153Q494R4 210 aa4.59□□□□□ -1.67
HDAC3-206ENST00000471968 SLC22A6Q4U2R8 563 aa4.59□□□□□ -1.67
HDAC3-206ENST00000471968 RNASE12Q5GAN4 147 aaKnown RBP4.59□□□□□ -1.67
HDAC3-206ENST00000471968 KRBOX4Q5JUW0 171 aa4.59□□□□□ -1.67
HDAC3-206ENST00000471968 C6orf10Q5SRN2 563 aa4.59□□□□□ -1.67
HDAC3-206ENST00000471968 TIFABQ6ZNK6 161 aa4.59□□□□□ -1.67
HDAC3-206ENST00000471968 Q6ZRN7 208 aaPredicted RBP4.59□□□□□ -1.67
HDAC3-206ENST00000471968 ASRGL1Q7L266 308 aa4.59□□□□□ -1.67
HDAC3-206ENST00000471968 EIF1ADQ8N9N8 165 aaKnown RBP4.59□□□□□ -1.67
HDAC3-206ENST00000471968 ZNF114Q8NC26 417 aa4.59□□□□□ -1.67
HDAC3-206ENST00000471968 RFESDQ8TAC1 157 aa4.59□□□□□ -1.67
HDAC3-206ENST00000471968 ASB9Q96DX5 294 aa4.59□□□□□ -1.67
HDAC3-206ENST00000471968 RSRC1Q96IZ7 334 aaKnown RBP4.59□□□□□ -1.67
HDAC3-206ENST00000471968 SPAG8Q99932 426 aaPredicted RBP4.59□□□□□ -1.67
HDAC3-206ENST00000471968 PAIP2Q9BPZ3 127 aaKnown RBP4.59□□□□□ -1.67
HDAC3-206ENST00000471968 BTBD10Q9BSF8 475 aa4.59□□□□□ -1.67
HDAC3-206ENST00000471968 NIPAL2Q9H841 368 aa4.59□□□□□ -1.67
HDAC3-206ENST00000471968 Q9H8V8 135 aa4.59□□□□□ -1.67
HDAC3-206ENST00000471968 SPAG4Q9NPE6 437 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms