RNA–Protein interactions for RNA: ENST00000468402.1

HMGB1P25-201, Transcript of high mobility group box 1 pseudogene 25, humanhuman

BASIC

Gene HMGB1P25, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P25-201ENST00000468402 WDR34Q96EX3 536 aa2.74□□□□□ -1.97
HMGB1P25-201ENST00000468402 MRAP2Q96G30 205 aa2.74□□□□□ -1.97
HMGB1P25-201ENST00000468402 TMEM56Q96MV1 263 aa2.74□□□□□ -1.97
HMGB1P25-201ENST00000468402 NRIP2Q9BQI9 281 aa2.74□□□□□ -1.97
HMGB1P25-201ENST00000468402 UGT2B28Q9BY64 529 aa2.74□□□□□ -1.97
HMGB1P25-201ENST00000468402 OR11A1Q9GZK7 315 aa2.74□□□□□ -1.97
HMGB1P25-201ENST00000468402 GFRA4Q9GZZ7 299 aa2.74□□□□□ -1.97
HMGB1P25-201ENST00000468402 SLC22A4Q9H015 551 aa2.74□□□□□ -1.97
HMGB1P25-201ENST00000468402 CDC42EP4Q9H3Q1 356 aaKnown RBP2.74□□□□□ -1.97
HMGB1P25-201ENST00000468402 REEP1Q9H902 201 aa2.74□□□□□ -1.97
HMGB1P25-201ENST00000468402 CCL28Q9NRJ3 127 aa2.74□□□□□ -1.97
HMGB1P25-201ENST00000468402 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.74□□□□□ -1.97
HMGB1P25-201ENST00000468402 DDIT4Q9NX09 232 aa2.74□□□□□ -1.97
HMGB1P25-201ENST00000468402 VNN3Q9NY84 501 aa2.74□□□□□ -1.97
HMGB1P25-201ENST00000468402 DEC1Q9P2X7 70 aa2.74□□□□□ -1.97
HMGB1P25-201ENST00000468402 RAB26Q9ULW5 256 aa2.74□□□□□ -1.97
HMGB1P25-201ENST00000468402 ACOT9Q9Y305 439 aa2.74□□□□□ -1.97
HMGB1P25-201ENST00000468402 UTP11Q9Y3A2 253 aaKnown RBP2.74□□□□□ -1.97
HMGB1P25-201ENST00000468402 ZNF337Q9Y3M9 751 aa2.74□□□□□ -1.97
HMGB1P25-201ENST00000468402 LSM5Q9Y4Y9 91 aaKnown RBP2.74□□□□□ -1.97
HMGB1P25-201ENST00000468402 MTCH2Q9Y6C9 303 aa2.74□□□□□ -1.97
HMGB1P25-201ENST00000468402 PRRC2BQ5JSZ5 2229 aaKnown RBP2.74□□□□□ -1.97
HMGB1P25-201ENST00000468402 PHF3Q92576 2039 aaKnown RBP2.74□□□□□ -1.97
HMGB1P25-201ENST00000468402 NUMA1Q14980 2115 aa2.74□□□□□ -1.97
HMGB1P25-201ENST00000468402 FANCMQ8IYD8 2048 aa2.73□□□□□ -1.97
HMGB1P25-201ENST00000468402 PCNX3Q9H6A9 2034 aa2.73□□□□□ -1.97
HMGB1P25-201ENST00000468402 SCN3AQ9NY46 2000 aa2.73□□□□□ -1.97
HMGB1P25-201ENST00000468402 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.73□□□□□ -1.97
HMGB1P25-201ENST00000468402 FAM240AA0A1B0GVK7 77 aa2.73□□□□□ -1.97
HMGB1P25-201ENST00000468402 A6NDN8 102 aa2.73□□□□□ -1.97
HMGB1P25-201ENST00000468402 MIF4GDA9UHW6 222 aaKnown RBP2.73□□□□□ -1.97
HMGB1P25-201ENST00000468402 TMEM238C9JI98 176 aa2.73□□□□□ -1.97
HMGB1P25-201ENST00000468402 M0R1B8 84 aa2.73□□□□□ -1.97
HMGB1P25-201ENST00000468402 TNFRSF11BO00300 401 aa2.73□□□□□ -1.97
HMGB1P25-201ENST00000468402 CCL16O15467 120 aa2.73□□□□□ -1.97
HMGB1P25-201ENST00000468402 SHOX2O60902 331 aaPredicted RBP2.73□□□□□ -1.97
HMGB1P25-201ENST00000468402 SNRNP200O75643 2136 aaKnown RBP2.73□□□□□ -1.97
HMGB1P25-201ENST00000468402 SOX14O95416 240 aa2.73□□□□□ -1.97
HMGB1P25-201ENST00000468402 TTC4O95801 387 aa2.73□□□□□ -1.97
HMGB1P25-201ENST00000468402 PTHP01270 115 aa2.73□□□□□ -1.97
HMGB1P25-201ENST00000468402 MT-ND4P03905 459 aa2.73□□□□□ -1.97
HMGB1P25-201ENST00000468402 TCRBP04435 133 aa2.73□□□□□ -1.97
HMGB1P25-201ENST00000468402 IFNA16P05015 189 aa2.73□□□□□ -1.97
HMGB1P25-201ENST00000468402 HPNP05981 417 aa2.73□□□□□ -1.97
HMGB1P25-201ENST00000468402 HOXC4P09017 264 aaPredicted RBP2.73□□□□□ -1.97
HMGB1P25-201ENST00000468402 PIRTP0C851 137 aa2.73□□□□□ -1.97
HMGB1P25-201ENST00000468402 P0C879 139 aa2.73□□□□□ -1.97
HMGB1P25-201ENST00000468402 OR5H8P0DN80 308 aa2.73□□□□□ -1.97
HMGB1P25-201ENST00000468402 KCNE1P15382 129 aa2.73□□□□□ -1.97
HMGB1P25-201ENST00000468402 CD1EP15812 388 aa2.73□□□□□ -1.97
HMGB1P25-201ENST00000468402 ATF1P18846 271 aa2.73□□□□□ -1.97
HMGB1P25-201ENST00000468402 RAB3BP20337 219 aa2.73□□□□□ -1.97
HMGB1P25-201ENST00000468402 M6PRP20645 277 aa2.73□□□□□ -1.97
HMGB1P25-201ENST00000468402 MYL9P24844 172 aa2.73□□□□□ -1.97
HMGB1P25-201ENST00000468402 CEACAM6P40199 344 aa2.73□□□□□ -1.97
HMGB1P25-201ENST00000468402 AQP5P55064 265 aa2.73□□□□□ -1.97
HMGB1P25-201ENST00000468402 FGF8P55075 233 aaPredicted RBP2.73□□□□□ -1.97
HMGB1P25-201ENST00000468402 TPI1P60174 286 aa2.73□□□□□ -1.97
HMGB1P25-201ENST00000468402 PPP1CBP62140 327 aa2.73□□□□□ -1.97
HMGB1P25-201ENST00000468402 RPL19P84098 196 aaKnown RBP2.73□□□□□ -1.97
HMGB1P25-201ENST00000468402 FAM3AP98173 230 aa2.73□□□□□ -1.97
HMGB1P25-201ENST00000468402 CD164Q04900 197 aa2.73□□□□□ -1.97
HMGB1P25-201ENST00000468402 INCA1Q0VD86 236 aa2.73□□□□□ -1.97
HMGB1P25-201ENST00000468402 SLC25A35Q3KQZ1 300 aa2.73□□□□□ -1.97
HMGB1P25-201ENST00000468402 NCBP2-AS2Q69YL0 99 aa2.73□□□□□ -1.97
HMGB1P25-201ENST00000468402 UGT2A3Q6UWM9 527 aa2.73□□□□□ -1.97
HMGB1P25-201ENST00000468402 RFLNAQ6ZTI6 216 aa2.73□□□□□ -1.97
HMGB1P25-201ENST00000468402 TGIF2LYQ8IUE0 185 aa2.73□□□□□ -1.97
HMGB1P25-201ENST00000468402 CEND1Q8N111 149 aa2.73□□□□□ -1.97
HMGB1P25-201ENST00000468402 C4orf33Q8N1A6 199 aa2.73□□□□□ -1.97
HMGB1P25-201ENST00000468402 STK40Q8N2I9 435 aa2.73□□□□□ -1.97
HMGB1P25-201ENST00000468402 STPG2Q8N412 459 aa2.73□□□□□ -1.97
HMGB1P25-201ENST00000468402 C2orf73Q8N5S3 287 aaPredicted RBP2.73□□□□□ -1.97
HMGB1P25-201ENST00000468402 NPWQ8N729 165 aa2.73□□□□□ -1.97
HMGB1P25-201ENST00000468402 CHST4Q8NCG5 386 aa2.73□□□□□ -1.97
HMGB1P25-201ENST00000468402 OR10Z1Q8NGY1 313 aa2.73□□□□□ -1.97
HMGB1P25-201ENST00000468402 OR51Q1Q8NH59 317 aa2.73□□□□□ -1.97
HMGB1P25-201ENST00000468402 NEIL3Q8TAT5 605 aa2.73□□□□□ -1.97
HMGB1P25-201ENST00000468402 ZFP90Q8TF47 636 aa2.73□□□□□ -1.97
HMGB1P25-201ENST00000468402 C16orf78Q8WTQ4 265 aa2.73□□□□□ -1.97
HMGB1P25-201ENST00000468402 CASTOR1Q8WTX7 329 aa2.73□□□□□ -1.97
HMGB1P25-201ENST00000468402 SMIM19Q96E16 107 aa2.73□□□□□ -1.97
HMGB1P25-201ENST00000468402 ZMYND19Q96E35 227 aaPredicted RBP2.73□□□□□ -1.97
HMGB1P25-201ENST00000468402 SMIM12Q96EX1 92 aa2.73□□□□□ -1.97
HMGB1P25-201ENST00000468402 AURKBQ96GD4 344 aaPredicted RBP2.73□□□□□ -1.97
HMGB1P25-201ENST00000468402 GPR22Q99680 433 aa2.73□□□□□ -1.97
HMGB1P25-201ENST00000468402 PRRT1Q99946 306 aa2.73□□□□□ -1.97
HMGB1P25-201ENST00000468402 DEFB127Q9H1M4 99 aa2.73□□□□□ -1.97
HMGB1P25-201ENST00000468402 LHX5Q9H2C1 402 aa2.73□□□□□ -1.97
HMGB1P25-201ENST00000468402 EDA2RQ9HAV5 297 aa2.73□□□□□ -1.97
HMGB1P25-201ENST00000468402 RGS18Q9NS28 235 aa2.73□□□□□ -1.97
HMGB1P25-201ENST00000468402 RAB22AQ9UL26 194 aa2.73□□□□□ -1.97
HMGB1P25-201ENST00000468402 Q9Y3F1 56 aa2.73□□□□□ -1.97
HMGB1P25-201ENST00000468402 KLF12Q9Y4X4 402 aa2.73□□□□□ -1.97
HMGB1P25-201ENST00000468402 OR51B2Q9Y5P1 312 aa2.73□□□□□ -1.97
HMGB1P25-201ENST00000468402 DOCK8Q8NF50 2099 aa2.73□□□□□ -1.97
HMGB1P25-201ENST00000468402 GOLGA4Q13439 2230 aaKnown RBP2.73□□□□□ -1.97
HMGB1P25-201ENST00000468402 NUP210Q8TEM1 1887 aaPredicted RBP2.73□□□□□ -1.97
HMGB1P25-201ENST00000468402 ADAMTS9Q9P2N4 1935 aa2.72□□□□□ -1.97
HMGB1P25-201ENST00000468402 NUP214P35658 2090 aaPredicted RBP2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms