RNA–Protein interactions for RNA: ENST00000461743.1

VPS52-213, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 3

Gene VPS52, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-213ENST00000461743 CFPP27918 469 aa9.69□□□□□ -0.86
VPS52-213ENST00000461743 PSMB9P28065 219 aa9.69□□□□□ -0.86
VPS52-213ENST00000461743 HTR2CP28335 458 aa9.69□□□□□ -0.86
VPS52-213ENST00000461743 RPL15P61313 204 aaKnown RBP9.69□□□□□ -0.86
VPS52-213ENST00000461743 SCN1BQ07699 218 aa9.69□□□□□ -0.86
VPS52-213ENST00000461743 BAMBIQ13145 260 aa9.69□□□□□ -0.86
VPS52-213ENST00000461743 KLRD1Q13241 179 aa9.69□□□□□ -0.86
VPS52-213ENST00000461743 DEFB112Q30KQ8 113 aa9.69□□□□□ -0.86
VPS52-213ENST00000461743 THOC7Q6I9Y2 204 aaKnown RBP9.69□□□□□ -0.86
VPS52-213ENST00000461743 OR52W1Q6IF63 320 aa9.69□□□□□ -0.86
VPS52-213ENST00000461743 HCP5Q6MZN7 132 aa9.69□□□□□ -0.86
VPS52-213ENST00000461743 HEPN1Q6WQI6 88 aa9.69□□□□□ -0.86
VPS52-213ENST00000461743 Q6YL49 198 aa9.69□□□□□ -0.86
VPS52-213ENST00000461743 TRAPPC6BQ86SZ2 158 aa9.69□□□□□ -0.86
VPS52-213ENST00000461743 SPATA3Q8NHX4 192 aa9.69□□□□□ -0.86
VPS52-213ENST00000461743 SSMEM1Q8WWF3 244 aa9.69□□□□□ -0.86
VPS52-213ENST00000461743 ZDHHC16Q969W1 377 aa9.69□□□□□ -0.86
VPS52-213ENST00000461743 SLC25A28Q96A46 364 aa9.69□□□□□ -0.86
VPS52-213ENST00000461743 COQ2Q96H96 371 aa9.69□□□□□ -0.86
VPS52-213ENST00000461743 NKX3-1Q99801 234 aaPredicted RBP9.69□□□□□ -0.86
VPS52-213ENST00000461743 BCL7BQ9BQE9 202 aa9.69□□□□□ -0.86
VPS52-213ENST00000461743 DPCDQ9BVM2 203 aaPredicted RBP9.69□□□□□ -0.86
VPS52-213ENST00000461743 C19orf24Q9BVV8 132 aa9.69□□□□□ -0.86
VPS52-213ENST00000461743 PPIL3Q9H2H8 161 aaKnown RBP9.69□□□□□ -0.86
VPS52-213ENST00000461743 ESM1Q9NQ30 184 aa9.69□□□□□ -0.86
VPS52-213ENST00000461743 ZNRD1Q9P1U0 126 aa9.69□□□□□ -0.86
VPS52-213ENST00000461743 TBL2Q9Y4P3 447 aaKnown RBP9.69□□□□□ -0.86
VPS52-213ENST00000461743 SESN1Q9Y6P5 492 aa9.69□□□□□ -0.86
VPS52-213ENST00000461743 A0A1W2PP11 408 aa9.68□□□□□ -0.86
VPS52-213ENST00000461743 ODF3BA8MYP8 253 aa9.68□□□□□ -0.86
VPS52-213ENST00000461743 SLC17A2O00624 439 aa9.68□□□□□ -0.86
VPS52-213ENST00000461743 PDCD5O14737 125 aa9.68□□□□□ -0.86
VPS52-213ENST00000461743 CA11O75493 328 aa9.68□□□□□ -0.86
VPS52-213ENST00000461743 CRTAPO75718 401 aaPredicted RBP9.68□□□□□ -0.86
VPS52-213ENST00000461743 MYL9P24844 172 aa9.68□□□□□ -0.86
VPS52-213ENST00000461743 FGF9P31371 208 aaPredicted RBP9.68□□□□□ -0.86
VPS52-213ENST00000461743 SAA4P35542 130 aa9.68□□□□□ -0.86
VPS52-213ENST00000461743 AESQ08117 197 aa9.68□□□□□ -0.86
VPS52-213ENST00000461743 RBM39Q14498 530 aaKnown RBP9.68□□□□□ -0.86
VPS52-213ENST00000461743 AANATQ16613 207 aa9.68□□□□□ -0.86
VPS52-213ENST00000461743 SYT6Q5T7P8 510 aaPredicted RBP9.68□□□□□ -0.86
VPS52-213ENST00000461743 RSBN1Q5VWQ0 802 aaPredicted RBP9.68□□□□□ -0.86
VPS52-213ENST00000461743 OR2W3Q7Z3T1 314 aa9.68□□□□□ -0.86
VPS52-213ENST00000461743 PIP4P2Q8N4L2 257 aa9.68□□□□□ -0.86
VPS52-213ENST00000461743 TPRX1Q8N7U7 411 aa9.68□□□□□ -0.86
VPS52-213ENST00000461743 SUMF2Q8NBJ7 301 aa9.68□□□□□ -0.86
VPS52-213ENST00000461743 OR11H6Q8NGC7 330 aa9.68□□□□□ -0.86
VPS52-213ENST00000461743 KCNG3Q8TAE7 436 aa9.68□□□□□ -0.86
VPS52-213ENST00000461743 S100ZQ8WXG8 99 aa9.68□□□□□ -0.86
VPS52-213ENST00000461743 TMEM59Q9BXS4 323 aa9.68□□□□□ -0.86
VPS52-213ENST00000461743 DAPK2Q9UIK4 370 aa9.68□□□□□ -0.86
VPS52-213ENST00000461743 STUB1Q9UNE7 303 aa9.68□□□□□ -0.86
VPS52-213ENST00000461743 FAM96BQ9Y3D0 163 aa9.68□□□□□ -0.86
VPS52-213ENST00000461743 DNHD1Q96M86 4753 aa9.68□□□□□ -0.86
VPS52-213ENST00000461743 TENM1Q9UKZ4 2725 aa9.67□□□□□ -0.86
VPS52-213ENST00000461743 A0A0U1RQK1 487 aa9.67□□□□□ -0.86
VPS52-213ENST00000461743 TMEM30CPA0ZSE6 113 aa9.67□□□□□ -0.86
VPS52-213ENST00000461743 MEIOCA2RUB1 952 aa9.67□□□□□ -0.86
VPS52-213ENST00000461743 PAHP00439 452 aa9.67□□□□□ -0.86
VPS52-213ENST00000461743 MELTFP08582 738 aa9.67□□□□□ -0.86
VPS52-213ENST00000461743 CD34P28906 385 aa9.67□□□□□ -0.86
VPS52-213ENST00000461743 GLIPR1P48060 266 aa9.67□□□□□ -0.86
VPS52-213ENST00000461743 SLC9A3R2Q15599 337 aa9.67□□□□□ -0.86
VPS52-213ENST00000461743 RAB11BQ15907 218 aa9.67□□□□□ -0.86
VPS52-213ENST00000461743 TAF9Q16594 264 aa9.67□□□□□ -0.86
VPS52-213ENST00000461743 ZNF626Q68DY1 528 aa9.67□□□□□ -0.86
VPS52-213ENST00000461743 SLC35E4Q6ICL7 350 aa9.67□□□□□ -0.86
VPS52-213ENST00000461743 ZNF782Q6ZMW2 699 aaPredicted RBP9.67□□□□□ -0.86
VPS52-213ENST00000461743 RTN4RL2Q86UN3 420 aa9.67□□□□□ -0.86
VPS52-213ENST00000461743 ZNF565Q8N9K5 539 aa9.67□□□□□ -0.86
VPS52-213ENST00000461743 BEND2Q8NDZ0 799 aa9.67□□□□□ -0.86
VPS52-213ENST00000461743 OR10A7Q8NGE5 316 aa9.67□□□□□ -0.86
VPS52-213ENST00000461743 OR5R1Q8NH85 324 aa9.67□□□□□ -0.86
VPS52-213ENST00000461743 MDFIQ99750 246 aa9.67□□□□□ -0.86
VPS52-213ENST00000461743 TM2D1Q9BX74 207 aa9.67□□□□□ -0.86
VPS52-213ENST00000461743 SELENOIQ9C0D9 397 aa9.67□□□□□ -0.86
VPS52-213ENST00000461743 TMEM133Q9H2Q1 129 aa9.67□□□□□ -0.86
VPS52-213ENST00000461743 DPAGT1Q9H3H5 408 aa9.67□□□□□ -0.86
VPS52-213ENST00000461743 LINC00574Q9H8X3 128 aa9.67□□□□□ -0.86
VPS52-213ENST00000461743 RAB9BQ9NP90 201 aa9.67□□□□□ -0.86
VPS52-213ENST00000461743 FBLN5Q9UBX5 448 aa9.67□□□□□ -0.86
VPS52-213ENST00000461743 A0A087X0M5 115 aa9.66□□□□□ -0.86
VPS52-213ENST00000461743 KBTBD11-OT1A0A1B0GTJ5 212 aa9.66□□□□□ -0.86
VPS52-213ENST00000461743 MDFIC2A0A1B0GVS7 189 aa9.66□□□□□ -0.86
VPS52-213ENST00000461743 A0A1B0GX30 115 aa9.66□□□□□ -0.86
VPS52-213ENST00000461743 BTBD17A6NE02 478 aa9.66□□□□□ -0.86
VPS52-213ENST00000461743 TMEM14DPA8MWL7 114 aa9.66□□□□□ -0.86
VPS52-213ENST00000461743 MCRIP1C9JLW8 97 aa9.66□□□□□ -0.86
VPS52-213ENST00000461743 J3QRK9 145 aa9.66□□□□□ -0.86
VPS52-213ENST00000461743 HSPB6O14558 160 aa9.66□□□□□ -0.86
VPS52-213ENST00000461743 HOXA3O43365 443 aaPredicted RBP9.66□□□□□ -0.86
VPS52-213ENST00000461743 IL1AP01583 271 aa9.66□□□□□ -0.86
VPS52-213ENST00000461743 VSIG8P0DPA2 414 aa9.66□□□□□ -0.86
VPS52-213ENST00000461743 GLP1RP43220 463 aa9.66□□□□□ -0.86
VPS52-213ENST00000461743 LGALS4P56470 323 aa9.66□□□□□ -0.86
VPS52-213ENST00000461743 RPS27AP62979 156 aaKnown RBP9.66□□□□□ -0.86
VPS52-213ENST00000461743 FAM189A2Q15884 450 aa9.66□□□□□ -0.86
VPS52-213ENST00000461743 TMEM30BQ3MIR4 351 aa9.66□□□□□ -0.86
VPS52-213ENST00000461743 TIMM50Q3ZCQ8 353 aa9.66□□□□□ -0.86
VPS52-213ENST00000461743 ATAD3CQ5T2N8 411 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms