RNA–Protein interactions for RNA: ENST00000455661.5

PTPRE-204, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-204ENST00000455661 NCOA6Q14686 2063 aaPredicted RBP11.82□□□□□ -0.52
PTPRE-204ENST00000455661 PPP5D1E7EU14 171 aa11.82□□□□□ -0.52
PTPRE-204ENST00000455661 NPIPA2E9PIF3 369 aa11.82□□□□□ -0.52
PTPRE-204ENST00000455661 NPIPA3F8WFD2 350 aa11.82□□□□□ -0.52
PTPRE-204ENST00000455661 OR7C1O76099 320 aaPredicted RBP11.82□□□□□ -0.52
PTPRE-204ENST00000455661 HLA-HP01893 362 aa11.82□□□□□ -0.52
PTPRE-204ENST00000455661 UCP1P25874 307 aa11.82□□□□□ -0.52
PTPRE-204ENST00000455661 NPBWR2P48146 333 aa11.82□□□□□ -0.52
PTPRE-204ENST00000455661 RPS18P62269 152 aaKnown RBP11.82□□□□□ -0.52
PTPRE-204ENST00000455661 ADIRFQ15847 76 aa11.82□□□□□ -0.52
PTPRE-204ENST00000455661 NCR3LG1Q68D85 454 aa11.82□□□□□ -0.52
PTPRE-204ENST00000455661 ZNF818PQ6ZRF7 136 aa11.82□□□□□ -0.52
PTPRE-204ENST00000455661 TGIF2LYQ8IUE0 185 aa11.82□□□□□ -0.52
PTPRE-204ENST00000455661 GAPTQ8N292 157 aa11.82□□□□□ -0.52
PTPRE-204ENST00000455661 C17orf78Q8N4C9 275 aa11.82□□□□□ -0.52
PTPRE-204ENST00000455661 PLPPR1Q8TBJ4 325 aa11.82□□□□□ -0.52
PTPRE-204ENST00000455661 NAT6Q93015 286 aa11.82□□□□□ -0.52
PTPRE-204ENST00000455661 ATG2AQ2TAZ0 1938 aa11.82□□□□□ -0.52
PTPRE-204ENST00000455661 IGLV3-19P01714 112 aa11.81□□□□□ -0.52
PTPRE-204ENST00000455661 LCATP04180 440 aa11.81□□□□□ -0.52
PTPRE-204ENST00000455661 TUBG1P23258 451 aa11.81□□□□□ -0.52
PTPRE-204ENST00000455661 FUT6P51993 359 aa11.81□□□□□ -0.52
PTPRE-204ENST00000455661 PAX9P55771 341 aa11.81□□□□□ -0.52
PTPRE-204ENST00000455661 RBM11P57052 281 aaKnown RBP11.81□□□□□ -0.52
PTPRE-204ENST00000455661 MRPS34P82930 218 aaKnown RBP11.81□□□□□ -0.52
PTPRE-204ENST00000455661 NKAIN1Q4KMZ8 207 aa11.81□□□□□ -0.52
PTPRE-204ENST00000455661 ABLIM2Q6H8Q1 611 aa11.81□□□□□ -0.52
PTPRE-204ENST00000455661 ZNF66Q6ZN08 573 aa11.81□□□□□ -0.52
PTPRE-204ENST00000455661 IL22RA2Q969J5 263 aa11.81□□□□□ -0.52
PTPRE-204ENST00000455661 TPSD1Q9BZJ3 242 aa11.81□□□□□ -0.52
PTPRE-204ENST00000455661 DCAF16Q9NXF7 216 aa11.81□□□□□ -0.52
PTPRE-204ENST00000455661 LAMP3Q9UQV4 416 aa11.81□□□□□ -0.52
PTPRE-204ENST00000455661 RNF115Q9Y4L5 304 aa11.81□□□□□ -0.52
PTPRE-204ENST00000455661 A0A1B0GWJ7 208 aa11.81□□□□□ -0.52
PTPRE-204ENST00000455661 APLNRP35414 380 aa11.81□□□□□ -0.52
PTPRE-204ENST00000455661 FGF8P55075 233 aaPredicted RBP11.81□□□□□ -0.52
PTPRE-204ENST00000455661 DLX2Q07687 328 aaPredicted RBP11.81□□□□□ -0.52
PTPRE-204ENST00000455661 RAB35Q15286 201 aa11.81□□□□□ -0.52
PTPRE-204ENST00000455661 TMEM241Q24JQ0 296 aa11.81□□□□□ -0.52
PTPRE-204ENST00000455661 C16orf82Q7Z2V1 217 aa11.81□□□□□ -0.52
PTPRE-204ENST00000455661 C5orf24Q7Z6I8 188 aa11.81□□□□□ -0.52
PTPRE-204ENST00000455661 OR5D13Q8NGL4 314 aa11.81□□□□□ -0.52
PTPRE-204ENST00000455661 TMEM18Q96B42 140 aa11.81□□□□□ -0.52
PTPRE-204ENST00000455661 RAB40CQ96S21 281 aa11.81□□□□□ -0.52
PTPRE-204ENST00000455661 PYGO2Q9BRQ0 406 aa11.81□□□□□ -0.52
PTPRE-204ENST00000455661 RSG1Q9BU20 258 aa11.81□□□□□ -0.52
PTPRE-204ENST00000455661 ULBP2Q9BZM5 246 aa11.81□□□□□ -0.52
PTPRE-204ENST00000455661 Q9N2K0 584 aa11.81□□□□□ -0.52
PTPRE-204ENST00000455661 PRSS50Q9UI38 385 aa11.81□□□□□ -0.52
PTPRE-204ENST00000455661 PIGBOS1A0A0B4J2F0 54 aa11.8□□□□□ -0.52
PTPRE-204ENST00000455661 PFN1P07737 140 aaKnown RBP11.8□□□□□ -0.52
PTPRE-204ENST00000455661 S100GP29377 79 aa11.8□□□□□ -0.52
PTPRE-204ENST00000455661 IDH3GP51553 393 aaPredicted RBP11.8□□□□□ -0.52
PTPRE-204ENST00000455661 TNFRSF9Q07011 255 aa11.8□□□□□ -0.52
PTPRE-204ENST00000455661 HNF4GQ14541 408 aa11.8□□□□□ -0.52
PTPRE-204ENST00000455661 Q6ZPA2 131 aa11.8□□□□□ -0.52
PTPRE-204ENST00000455661 SMIM7Q9BQ49 75 aa11.8□□□□□ -0.52
PTPRE-204ENST00000455661 PSMG3Q9BT73 122 aaPredicted RBP11.8□□□□□ -0.52
PTPRE-204ENST00000455661 FGF21Q9NSA1 209 aa11.8□□□□□ -0.52
PTPRE-204ENST00000455661 H3BP45 60 aa11.8□□□□□ -0.52
PTPRE-204ENST00000455661 ZFAND5O76080 213 aa11.8□□□□□ -0.52
PTPRE-204ENST00000455661 CNOT4O95628 575 aaKnown RBP11.8□□□□□ -0.52
PTPRE-204ENST00000455661 CRYGSP22914 178 aa11.8□□□□□ -0.52
PTPRE-204ENST00000455661 GALR1P47211 349 aa11.8□□□□□ -0.52
PTPRE-204ENST00000455661 FAM3BP58499 235 aaPredicted RBP11.8□□□□□ -0.52
PTPRE-204ENST00000455661 TMEM267Q0VDI3 215 aaPredicted RBP11.8□□□□□ -0.52
PTPRE-204ENST00000455661 IQCJQ1A5X6 159 aa11.8□□□□□ -0.52
PTPRE-204ENST00000455661 ACSF3Q4G176 576 aaPredicted RBP11.8□□□□□ -0.52
PTPRE-204ENST00000455661 FAM27BQ5VT28 67 aa11.8□□□□□ -0.52
PTPRE-204ENST00000455661 WDR25Q64LD2 544 aaPredicted RBP11.8□□□□□ -0.52
PTPRE-204ENST00000455661 MAML2Q8IZL2 1156 aaPredicted RBP11.8□□□□□ -0.52
PTPRE-204ENST00000455661 NECAP1Q8NC96 275 aa11.8□□□□□ -0.52
PTPRE-204ENST00000455661 ZNF385AQ96PM9 386 aaKnown RBP11.8□□□□□ -0.52
PTPRE-204ENST00000455661 TAAR3PQ9P1P4 343 aa11.8□□□□□ -0.52
PTPRE-204ENST00000455661 CD207Q9UJ71 328 aa11.8□□□□□ -0.52
PTPRE-204ENST00000455661 SHANK1Q9Y566 2161 aa11.79□□□□□ -0.52
PTPRE-204ENST00000455661 IGHV1OR21-1A0A087WYE8 117 aa11.79□□□□□ -0.52
PTPRE-204ENST00000455661 H7BYZ3 331 aa11.79□□□□□ -0.52
PTPRE-204ENST00000455661 DUX1O43812 170 aa11.79□□□□□ -0.52
PTPRE-204ENST00000455661 VAMP5O95183 116 aa11.79□□□□□ -0.52
PTPRE-204ENST00000455661 METTL15P1P0C7V9 234 aa11.79□□□□□ -0.52
PTPRE-204ENST00000455661 CCKARP32238 428 aa11.79□□□□□ -0.52
PTPRE-204ENST00000455661 VEGFBP49765 207 aa11.79□□□□□ -0.52
PTPRE-204ENST00000455661 PDLIM4P50479 330 aa11.79□□□□□ -0.52
PTPRE-204ENST00000455661 CASP6P55212 293 aa11.79□□□□□ -0.52
PTPRE-204ENST00000455661 SERF2P84101 59 aa11.79□□□□□ -0.52
PTPRE-204ENST00000455661 BSXQ3C1V8 233 aa11.79□□□□□ -0.52
PTPRE-204ENST00000455661 PLCXD3Q63HM9 321 aa11.79□□□□□ -0.52
PTPRE-204ENST00000455661 TMEM42Q69YG0 159 aa11.79□□□□□ -0.52
PTPRE-204ENST00000455661 FAM180AQ6UWF9 173 aa11.79□□□□□ -0.52
PTPRE-204ENST00000455661 Q6ZS49 121 aa11.79□□□□□ -0.52
PTPRE-204ENST00000455661 CYP2G1PQ6ZSU1 146 aa11.79□□□□□ -0.52
PTPRE-204ENST00000455661 DNASE2BQ8WZ79 361 aa11.79□□□□□ -0.52
PTPRE-204ENST00000455661 EXTL1Q92935 676 aa11.79□□□□□ -0.52
PTPRE-204ENST00000455661 ZNF501Q96CX3 271 aaPredicted RBP11.79□□□□□ -0.52
PTPRE-204ENST00000455661 ADGRG7Q96K78 797 aa11.79□□□□□ -0.52
PTPRE-204ENST00000455661 AGMATQ9BSE5 352 aa11.79□□□□□ -0.52
PTPRE-204ENST00000455661 MYOTQ9UBF9 498 aa11.79□□□□□ -0.52
PTPRE-204ENST00000455661 SLC22A20A6NK97 555 aa11.78□□□□□ -0.52
PTPRE-204ENST00000455661 H0Y980 276 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms