RNA–Protein interactions for RNA: ENST00000436724.5

PTPRF-207, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 2,168 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-207ENST00000436724 Q9N2K0 584 aa17.83■□□□□ 0.44
PTPRF-207ENST00000436724 C1orf123Q9NWV4 160 aa17.83■□□□□ 0.44
PTPRF-207ENST00000436724 SDHAF2Q9NX18 166 aa17.83■□□□□ 0.44
PTPRF-207ENST00000436724 NKX2-6A6NCS4 301 aa17.82■□□□□ 0.44
PTPRF-207ENST00000436724 POM121CA8CG34 1229 aa17.82■□□□□ 0.44
PTPRF-207ENST00000436724 SLC33A1O00400 549 aaPredicted RBP17.82■□□□□ 0.44
PTPRF-207ENST00000436724 CDSNQ15517 529 aa17.82■□□□□ 0.44
PTPRF-207ENST00000436724 IFT22Q9H7X7 185 aa17.82■□□□□ 0.44
PTPRF-207ENST00000436724 ACACBO00763 2458 aa17.82■□□□□ 0.44
PTPRF-207ENST00000436724 SCTP09683 121 aa17.81■□□□□ 0.44
PTPRF-207ENST00000436724 RPS23P62266 143 aaKnown RBP17.81■□□□□ 0.44
PTPRF-207ENST00000436724 PAN3Q58A45 887 aaKnown RBP17.81■□□□□ 0.44
PTPRF-207ENST00000436724 ADAM5Q6NVV9 412 aa17.81■□□□□ 0.44
PTPRF-207ENST00000436724 MRPL30Q8TCC3 161 aaKnown RBP17.81■□□□□ 0.44
PTPRF-207ENST00000436724 OR2V2Q96R30 315 aa17.81■□□□□ 0.44
PTPRF-207ENST00000436724 ACAA1P09110 424 aaPredicted RBP17.81■□□□□ 0.44
PTPRF-207ENST00000436724 RCC1P18754 421 aaPredicted RBP17.81■□□□□ 0.44
PTPRF-207ENST00000436724 GRNP28799 593 aaKnown RBP17.81■□□□□ 0.44
PTPRF-207ENST00000436724 FCGR2CP31995 323 aa17.81■□□□□ 0.44
PTPRF-207ENST00000436724 ZNF546Q86UE3 836 aa17.81■□□□□ 0.44
PTPRF-207ENST00000436724 TRAV39A0A0B4J263 110 aa17.8■□□□□ 0.44
PTPRF-207ENST00000436724 CCSO14618 274 aa17.8■□□□□ 0.44
PTPRF-207ENST00000436724 PGAM2P15259 253 aa17.8■□□□□ 0.44
PTPRF-207ENST00000436724 HLA-GP17693 338 aa17.8■□□□□ 0.44
PTPRF-207ENST00000436724 ASCL1P50553 236 aa17.8■□□□□ 0.44
PTPRF-207ENST00000436724 ADORA2A-AS1P86434 159 aa17.8■□□□□ 0.44
PTPRF-207ENST00000436724 TMEM128Q5BJH2 165 aa17.8■□□□□ 0.44
PTPRF-207ENST00000436724 DHRS11Q6UWP2 260 aa17.8■□□□□ 0.44
PTPRF-207ENST00000436724 ACP7Q6ZNF0 438 aa17.8■□□□□ 0.44
PTPRF-207ENST00000436724 NUP37Q8NFH4 326 aa17.8■□□□□ 0.44
PTPRF-207ENST00000436724 PLPPR1Q8TBJ4 325 aa17.8■□□□□ 0.44
PTPRF-207ENST00000436724 MRPL24Q96A35 216 aaKnown RBP17.8■□□□□ 0.44
PTPRF-207ENST00000436724 CACNA1DQ01668 2161 aa17.8■□□□□ 0.44
PTPRF-207ENST00000436724 SH2D1BO14796 132 aa17.8■□□□□ 0.44
PTPRF-207ENST00000436724 PTBP3O95758 552 aaKnown RBP17.8■□□□□ 0.44
PTPRF-207ENST00000436724 HAND1O96004 215 aa17.8■□□□□ 0.44
PTPRF-207ENST00000436724 KNG1P01042 644 aa17.8■□□□□ 0.44
PTPRF-207ENST00000436724 SFTPCP11686 197 aa17.8■□□□□ 0.44
PTPRF-207ENST00000436724 CD200P41217 278 aa17.8■□□□□ 0.44
PTPRF-207ENST00000436724 FXYD4P59646 89 aa17.8■□□□□ 0.44
PTPRF-207ENST00000436724 RBM39Q14498 530 aaKnown RBP17.8■□□□□ 0.44
PTPRF-207ENST00000436724 ATXN7L3Q14CW9 347 aaPredicted RBP17.8■□□□□ 0.44
PTPRF-207ENST00000436724 FAHD2BQ6P2I3 314 aaPredicted RBP17.8■□□□□ 0.44
PTPRF-207ENST00000436724 SLC51BQ86UW2 128 aa17.8■□□□□ 0.44
PTPRF-207ENST00000436724 TMEM185AQ8NFB2 350 aa17.8■□□□□ 0.44
PTPRF-207ENST00000436724 LRRC29Q8WV35 223 aa17.8■□□□□ 0.44
PTPRF-207ENST00000436724 TOMM40LQ969M1 308 aa17.8■□□□□ 0.44
PTPRF-207ENST00000436724 FAHD2AQ96GK7 314 aa17.8■□□□□ 0.44
PTPRF-207ENST00000436724 SEC22AQ96IW7 307 aa17.8■□□□□ 0.44
PTPRF-207ENST00000436724 PRR13Q9NZ81 148 aa17.8■□□□□ 0.44
PTPRF-207ENST00000436724 PSPNO60542 156 aa17.79■□□□□ 0.44
PTPRF-207ENST00000436724 CHRNB4P30926 498 aa17.79■□□□□ 0.44
PTPRF-207ENST00000436724 SUPT4H1P63272 117 aaKnown RBP17.79■□□□□ 0.44
PTPRF-207ENST00000436724 SPIN3Q5JUX0 258 aa17.79■□□□□ 0.44
PTPRF-207ENST00000436724 LPCAT3Q6P1A2 487 aa17.79■□□□□ 0.44
PTPRF-207ENST00000436724 OR5T2Q8NGG2 359 aa17.79■□□□□ 0.44
PTPRF-207ENST00000436724 B8ZZF3 427 aa17.79■□□□□ 0.44
PTPRF-207ENST00000436724 BET1O15155 118 aa17.79■□□□□ 0.44
PTPRF-207ENST00000436724 SELENOVP59797 346 aa17.79■□□□□ 0.44
PTPRF-207ENST00000436724 HERPUD1Q15011 391 aa17.79■□□□□ 0.44
PTPRF-207ENST00000436724 SLC38A6Q8IZM9 456 aa17.79■□□□□ 0.44
PTPRF-207ENST00000436724 MITD1Q8WV92 249 aa17.79■□□□□ 0.44
PTPRF-207ENST00000436724 MEGF10Q96KG7 1140 aa17.79■□□□□ 0.44
PTPRF-207ENST00000436724 LINC00052Q96N35 136 aa17.79■□□□□ 0.44
PTPRF-207ENST00000436724 SCGB3A2Q96PL1 93 aa17.79■□□□□ 0.44
PTPRF-207ENST00000436724 ATP23Q9Y6H3 246 aa17.79■□□□□ 0.44
PTPRF-207ENST00000436724 SPDEFO95238 335 aa17.78■□□□□ 0.44
PTPRF-207ENST00000436724 SLC25A4P12235 298 aa17.78■□□□□ 0.44
PTPRF-207ENST00000436724 EGR1P18146 543 aa17.78■□□□□ 0.44
PTPRF-207ENST00000436724 TAS2R31P59538 309 aa17.78■□□□□ 0.44
PTPRF-207ENST00000436724 FGL1Q08830 312 aa17.78■□□□□ 0.44
PTPRF-207ENST00000436724 SLC9A3R2Q15599 337 aa17.78■□□□□ 0.44
PTPRF-207ENST00000436724 Q6ZS49 121 aa17.78■□□□□ 0.44
PTPRF-207ENST00000436724 ITLN1Q8WWA0 313 aa17.78■□□□□ 0.44
PTPRF-207ENST00000436724 DECR2Q9NUI1 292 aa17.78■□□□□ 0.44
PTPRF-207ENST00000436724 IGKV1-6A0A0C4DH72 117 aa17.77■□□□□ 0.44
PTPRF-207ENST00000436724 RLN2P04090 185 aa17.77■□□□□ 0.44
PTPRF-207ENST00000436724 GLAP06280 429 aa17.77■□□□□ 0.44
PTPRF-207ENST00000436724 PLA2G5P39877 138 aa17.77■□□□□ 0.44
PTPRF-207ENST00000436724 MZT1Q08AG7 82 aa17.77■□□□□ 0.44
PTPRF-207ENST00000436724 ADIPOQQ15848 244 aa17.77■□□□□ 0.44
PTPRF-207ENST00000436724 C11orf87Q6NUJ2 197 aa17.77■□□□□ 0.44
PTPRF-207ENST00000436724 KCTD9Q7L273 389 aa17.77■□□□□ 0.44
PTPRF-207ENST00000436724 MOGAT3Q86VF5 341 aa17.77■□□□□ 0.44
PTPRF-207ENST00000436724 BOLLQ8N9W6 283 aaKnown RBP17.77■□□□□ 0.44
PTPRF-207ENST00000436724 LINC01560Q8TB33 94 aa17.77■□□□□ 0.44
PTPRF-207ENST00000436724 COQ3Q9NZJ6 369 aa17.77■□□□□ 0.44
PTPRF-207ENST00000436724 PKDREJQ9NTG1 2253 aa17.77■□□□□ 0.44
PTPRF-207ENST00000436724 A0A0D9SG52 128 aa17.77■□□□□ 0.43
PTPRF-207ENST00000436724 DUS4LO95620 317 aaKnown RBP17.77■□□□□ 0.43
PTPRF-207ENST00000436724 OR4A8P0C604 315 aa17.77■□□□□ 0.43
PTPRF-207ENST00000436724 SURF2Q15527 256 aaPredicted RBP17.77■□□□□ 0.43
PTPRF-207ENST00000436724 FIP1L1Q6UN15 594 aaKnown RBP17.77■□□□□ 0.43
PTPRF-207ENST00000436724 CLEC18BQ6UXF7 455 aa17.77■□□□□ 0.43
PTPRF-207ENST00000436724 OR1S1Q8NH92 325 aa17.77■□□□□ 0.43
PTPRF-207ENST00000436724 METRNQ9UJH8 293 aa17.77■□□□□ 0.43
PTPRF-207ENST00000436724 TNFSF18Q9UNG2 199 aa17.77■□□□□ 0.43
PTPRF-207ENST00000436724 KIAA2026Q5HYC2 2103 aa17.77■□□□□ 0.43
PTPRF-207ENST00000436724 TRDCB7Z8K6 153 aa17.76■□□□□ 0.43
PTPRF-207ENST00000436724 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 146.8 ms