RNA–Protein interactions for RNA: ENST00000427897.1

HSPG2-205, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-205ENST00000427897 SVOPQ8N4V2 548 aa16.69■□□□□ 0.26
HSPG2-205ENST00000427897 PIFOQ8TCI5 191 aa16.69■□□□□ 0.26
HSPG2-205ENST00000427897 DPCDQ9BVM2 203 aaPredicted RBP16.69■□□□□ 0.26
HSPG2-205ENST00000427897 FOXJ3Q9UPW0 622 aa16.69■□□□□ 0.26
HSPG2-205ENST00000427897 MRPS28Q9Y2Q9 187 aaKnown RBP16.69■□□□□ 0.26
HSPG2-205ENST00000427897 TRAV8-7A0A075B6U6 113 aa16.68■□□□□ 0.26
HSPG2-205ENST00000427897 KBTBD11-OT1A0A1B0GTJ5 212 aa16.68■□□□□ 0.26
HSPG2-205ENST00000427897 RBM11P57052 281 aaKnown RBP16.68■□□□□ 0.26
HSPG2-205ENST00000427897 RPS11P62280 158 aaKnown RBP eCLIP16.68■□□□□ 0.26
HSPG2-205ENST00000427897 DOC2BQ14184 412 aa16.68■□□□□ 0.26
HSPG2-205ENST00000427897 MED22Q15528 200 aa16.68■□□□□ 0.26
HSPG2-205ENST00000427897 TBCEQ15813 527 aaPredicted RBP16.68■□□□□ 0.26
HSPG2-205ENST00000427897 LTC4SQ16873 150 aa16.68■□□□□ 0.26
HSPG2-205ENST00000427897 MPV17LQ2QL34 196 aa16.68■□□□□ 0.26
HSPG2-205ENST00000427897 SUMF2Q8NBJ7 301 aa16.68■□□□□ 0.26
HSPG2-205ENST00000427897 Q8NFD4 153 aa16.68■□□□□ 0.26
HSPG2-205ENST00000427897 MUL1Q969V5 352 aa16.68■□□□□ 0.26
HSPG2-205ENST00000427897 LSM2Q9Y333 95 aaKnown RBP16.68■□□□□ 0.26
HSPG2-205ENST00000427897 SIGLEC9Q9Y336 463 aa16.68■□□□□ 0.26
HSPG2-205ENST00000427897 GEMIN2O14893 280 aaKnown RBP16.67■□□□□ 0.26
HSPG2-205ENST00000427897 TNFAIP8O95379 198 aa16.67■□□□□ 0.26
HSPG2-205ENST00000427897 CD1AP06126 327 aa16.67■□□□□ 0.26
HSPG2-205ENST00000427897 FSTP19883 344 aa16.67■□□□□ 0.26
HSPG2-205ENST00000427897 KRTAP10-3P60369 221 aa16.67■□□□□ 0.26
HSPG2-205ENST00000427897 AWAT2Q6E213 333 aa16.67■□□□□ 0.26
HSPG2-205ENST00000427897 GLIPR1L1Q6UWM5 242 aa16.67■□□□□ 0.26
HSPG2-205ENST00000427897 BAIAP2L2Q6UXY1 529 aa16.67■□□□□ 0.26
HSPG2-205ENST00000427897 MRGPRDQ8TDS7 321 aa16.67■□□□□ 0.26
HSPG2-205ENST00000427897 DERL3Q96Q80 235 aa16.67■□□□□ 0.26
HSPG2-205ENST00000427897 PRSS22Q9GZN4 317 aa16.67■□□□□ 0.26
HSPG2-205ENST00000427897 NCOR1P1Q9H4R4 102 aa16.67■□□□□ 0.26
HSPG2-205ENST00000427897 ZNF286AQ9HBT8 521 aa16.67■□□□□ 0.26
HSPG2-205ENST00000427897 CALYQ9NYX4 217 aa16.67■□□□□ 0.26
HSPG2-205ENST00000427897 TRBV5-7A0A0A0MS05 114 aa16.66■□□□□ 0.26
HSPG2-205ENST00000427897 A6NDX4 124 aa16.66■□□□□ 0.26
HSPG2-205ENST00000427897 CHST1O43916 411 aa16.66■□□□□ 0.26
HSPG2-205ENST00000427897 VSIG10L2P0DP72 767 aa16.66■□□□□ 0.26
HSPG2-205ENST00000427897 MNDAP41218 407 aa16.66■□□□□ 0.26
HSPG2-205ENST00000427897 DYNLT3P51808 116 aa16.66■□□□□ 0.26
HSPG2-205ENST00000427897 C17orf58Q2M2W7 97 aa16.66■□□□□ 0.26
HSPG2-205ENST00000427897 NHLRC3Q5JS37 347 aa16.66■□□□□ 0.26
HSPG2-205ENST00000427897 LDLRAD2Q5SZI1 272 aa16.66■□□□□ 0.26
HSPG2-205ENST00000427897 CDH26Q8IXH8 852 aa16.66■□□□□ 0.26
HSPG2-205ENST00000427897 MS4A15Q8N5U1 240 aa16.66■□□□□ 0.26
HSPG2-205ENST00000427897 OR4P4Q8NGL7 312 aa16.66■□□□□ 0.26
HSPG2-205ENST00000427897 OR13A1Q8NGR1 328 aa16.66■□□□□ 0.26
HSPG2-205ENST00000427897 TMED9Q9BVK6 235 aa16.66■□□□□ 0.26
HSPG2-205ENST00000427897 ISYNA1Q9NPH2 558 aa16.66■□□□□ 0.26
HSPG2-205ENST00000427897 IDI2-AS1Q9NZ38 188 aa16.66■□□□□ 0.26
HSPG2-205ENST00000427897 AMMECR1Q9Y4X0 333 aaPredicted RBP16.66■□□□□ 0.26
HSPG2-205ENST00000427897 TMEM30CPA0ZSE6 113 aa16.65■□□□□ 0.26
HSPG2-205ENST00000427897 MEGF11A6BM72 1044 aa16.65■□□□□ 0.26
HSPG2-205ENST00000427897 MCRIP1C9JLW8 97 aa16.65■□□□□ 0.26
HSPG2-205ENST00000427897 GZMHP20718 246 aa16.65■□□□□ 0.26
HSPG2-205ENST00000427897 CD34P28906 385 aa16.65■□□□□ 0.26
HSPG2-205ENST00000427897 GDNFP39905 211 aa16.65■□□□□ 0.26
HSPG2-205ENST00000427897 HERPUD1Q15011 391 aa16.65■□□□□ 0.26
HSPG2-205ENST00000427897 ACSM3Q53FZ2 586 aa16.65■□□□□ 0.26
HSPG2-205ENST00000427897 RSBN1Q5VWQ0 802 aaPredicted RBP16.65■□□□□ 0.26
HSPG2-205ENST00000427897 ZNF773Q6PK81 442 aa16.65■□□□□ 0.26
HSPG2-205ENST00000427897 ZNF367Q7RTV3 350 aa16.65■□□□□ 0.26
HSPG2-205ENST00000427897 NKAIN3Q8N8D7 197 aa16.65■□□□□ 0.26
HSPG2-205ENST00000427897 OR9G1Q8NH87 305 aa16.65■□□□□ 0.26
HSPG2-205ENST00000427897 RFESDQ8TAC1 157 aa16.65■□□□□ 0.26
HSPG2-205ENST00000427897 PLPPR1Q8TBJ4 325 aa16.65■□□□□ 0.26
HSPG2-205ENST00000427897 MRPS24Q96EL2 167 aaKnown RBP16.65■□□□□ 0.26
HSPG2-205ENST00000427897 AKR1E2Q96JD6 320 aa16.65■□□□□ 0.26
HSPG2-205ENST00000427897 OR5M11Q96RB7 305 aa16.65■□□□□ 0.26
HSPG2-205ENST00000427897 SPACA1Q9HBV2 294 aa16.65■□□□□ 0.26
HSPG2-205ENST00000427897 KIAA2026Q5HYC2 2103 aa16.64■□□□□ 0.25
HSPG2-205ENST00000427897 MAGEA13PA6NCF6 341 aa16.64■□□□□ 0.25
HSPG2-205ENST00000427897 BUB1B-PAK6H3BSN5 160 aa16.64■□□□□ 0.25
HSPG2-205ENST00000427897 JUNBP17275 347 aaPredicted RBP16.64■□□□□ 0.25
HSPG2-205ENST00000427897 EFNB2P52799 333 aa16.64■□□□□ 0.25
HSPG2-205ENST00000427897 GPR50Q13585 617 aa16.64■□□□□ 0.25
HSPG2-205ENST00000427897 HLA-DRB5Q30154 266 aa16.64■□□□□ 0.25
HSPG2-205ENST00000427897 CCDC144NLQ6NUI1 221 aa16.64■□□□□ 0.25
HSPG2-205ENST00000427897 CCBE1Q6UXH8 406 aaPredicted RBP16.64■□□□□ 0.25
HSPG2-205ENST00000427897 FCGR1BQ92637 280 aa16.64■□□□□ 0.25
HSPG2-205ENST00000427897 KIRREL1Q96J84 757 aa16.64■□□□□ 0.25
HSPG2-205ENST00000427897 IFT22Q9H7X7 185 aa16.64■□□□□ 0.25
HSPG2-205ENST00000427897 ACOT13Q9NPJ3 140 aa16.64■□□□□ 0.25
HSPG2-205ENST00000427897 TRAV39A0A0B4J263 110 aa16.63■□□□□ 0.25
HSPG2-205ENST00000427897 A0A1W2PP11 408 aa16.63■□□□□ 0.25
HSPG2-205ENST00000427897 CRTAPO75718 401 aaPredicted RBP16.63■□□□□ 0.25
HSPG2-205ENST00000427897 IL1AP01583 271 aa16.63■□□□□ 0.25
HSPG2-205ENST00000427897 IGLV1-47P01700 117 aa16.63■□□□□ 0.25
HSPG2-205ENST00000427897 IGHV3-7P01780 117 aa16.63■□□□□ 0.25
HSPG2-205ENST00000427897 HSMCR30P0CW71 290 aa16.63■□□□□ 0.25
HSPG2-205ENST00000427897 MAP2K4P45985 399 aa16.63■□□□□ 0.25
HSPG2-205ENST00000427897 MLLT11Q13015 90 aaPredicted RBP16.63■□□□□ 0.25
HSPG2-205ENST00000427897 C2orf68Q2NKX9 166 aa16.63■□□□□ 0.25
HSPG2-205ENST00000427897 SPARTQ8N0X7 666 aa16.63■□□□□ 0.25
HSPG2-205ENST00000427897 KLHDC1Q8N7A1 406 aa16.63■□□□□ 0.25
HSPG2-205ENST00000427897 CCDC107Q8WV48 283 aa16.63■□□□□ 0.25
HSPG2-205ENST00000427897 UFD1Q92890 307 aa16.63■□□□□ 0.25
HSPG2-205ENST00000427897 RPEQ96AT9 228 aa16.63■□□□□ 0.25
HSPG2-205ENST00000427897 SELENOIQ9C0D9 397 aa16.63■□□□□ 0.25
HSPG2-205ENST00000427897 BANF2Q9H503 90 aa16.63■□□□□ 0.25
HSPG2-205ENST00000427897 A0A087X0M5 115 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms