RNA–Protein interactions for RNA: ENST00000419387.5

NUP50-205, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 1,018 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-205ENST00000419387 TSEN15Q8WW01 171 aaKnown RBP7.55□□□□□ -1.2
NUP50-205ENST00000419387 CAPSLQ8WWF8 208 aa7.55□□□□□ -1.2
NUP50-205ENST00000419387 R3HDM4Q96D70 268 aa7.55□□□□□ -1.2
NUP50-205ENST00000419387 CPNE2Q96FN4 548 aaPredicted RBP7.55□□□□□ -1.2
NUP50-205ENST00000419387 OR4F4Q96R69 305 aa7.55□□□□□ -1.2
NUP50-205ENST00000419387 NR1H4Q96RI1 486 aaPredicted RBP7.55□□□□□ -1.2
NUP50-205ENST00000419387 GPER1Q99527 375 aa7.55□□□□□ -1.2
NUP50-205ENST00000419387 CITED2Q99967 270 aaPredicted RBP7.55□□□□□ -1.2
NUP50-205ENST00000419387 PPIL3Q9H2H8 161 aaKnown RBP7.55□□□□□ -1.2
NUP50-205ENST00000419387 NCOR1P1Q9H4R4 102 aa7.55□□□□□ -1.2
NUP50-205ENST00000419387 LIN7BQ9HAP6 207 aa7.55□□□□□ -1.2
NUP50-205ENST00000419387 LSM2Q9Y333 95 aaKnown RBP7.55□□□□□ -1.2
NUP50-205ENST00000419387 LRRC42Q9Y546 428 aa7.55□□□□□ -1.2
NUP50-205ENST00000419387 KIAA2026Q5HYC2 2103 aa7.54□□□□□ -1.2
NUP50-205ENST00000419387 TRAV24A0A0B4J272 114 aa7.54□□□□□ -1.2
NUP50-205ENST00000419387 EFCAB10A6NFE3 127 aa7.54□□□□□ -1.2
NUP50-205ENST00000419387 ADARB2-AS1A8MUL3 147 aa7.54□□□□□ -1.2
NUP50-205ENST00000419387 OOSP1A8MZH6 123 aa7.54□□□□□ -1.2
NUP50-205ENST00000419387 PTGES3LE9PB15 166 aa7.54□□□□□ -1.2
NUP50-205ENST00000419387 LY6LH3BQJ8 138 aa7.54□□□□□ -1.2
NUP50-205ENST00000419387 GABRPO00591 440 aa7.54□□□□□ -1.2
NUP50-205ENST00000419387 OR2F2O95006 317 aa7.54□□□□□ -1.2
NUP50-205ENST00000419387 SOX2P48431 317 aa7.54□□□□□ -1.2
NUP50-205ENST00000419387 RPS11P62280 158 aaKnown RBP eCLIP7.54□□□□□ -1.2
NUP50-205ENST00000419387 CD83Q01151 205 aa7.54□□□□□ -1.2
NUP50-205ENST00000419387 IL13RA2Q14627 380 aa7.54□□□□□ -1.2
NUP50-205ENST00000419387 TMEM95Q3KNT9 176 aa7.54□□□□□ -1.2
NUP50-205ENST00000419387 CCDC58Q4VC31 144 aa7.54□□□□□ -1.2
NUP50-205ENST00000419387 PAN3Q58A45 887 aaKnown RBP7.54□□□□□ -1.2
NUP50-205ENST00000419387 TPTE2P1Q5T6R2 138 aa7.54□□□□□ -1.2
NUP50-205ENST00000419387 DMKNQ6E0U4 476 aaPredicted RBP7.54□□□□□ -1.2
NUP50-205ENST00000419387 RPL22L1Q6P5R6 122 aaKnown RBP7.54□□□□□ -1.2
NUP50-205ENST00000419387 ASCL4Q6XD76 172 aa7.54□□□□□ -1.2
NUP50-205ENST00000419387 AHSA2Q719I0 299 aa7.54□□□□□ -1.2
NUP50-205ENST00000419387 Q8NFD4 153 aa7.54□□□□□ -1.2
NUP50-205ENST00000419387 OR51A2Q8NGJ7 313 aa7.54□□□□□ -1.2
NUP50-205ENST00000419387 OR51T1Q8NGJ9 327 aa7.54□□□□□ -1.2
NUP50-205ENST00000419387 OR52N1Q8NH53 320 aa7.54□□□□□ -1.2
NUP50-205ENST00000419387 OR9G1Q8NH87 305 aa7.54□□□□□ -1.2
NUP50-205ENST00000419387 GPR148Q8TDV2 347 aa7.54□□□□□ -1.2
NUP50-205ENST00000419387 TNFAIP8L1Q8WVP5 186 aa7.54□□□□□ -1.2
NUP50-205ENST00000419387 RGP1Q92546 391 aaPredicted RBP7.54□□□□□ -1.2
NUP50-205ENST00000419387 CNBD2Q96M20 576 aa7.54□□□□□ -1.2
NUP50-205ENST00000419387 RBM14Q96PK6 669 aaKnown RBP7.54□□□□□ -1.2
NUP50-205ENST00000419387 SLC25A33Q9BSK2 321 aa7.54□□□□□ -1.2
NUP50-205ENST00000419387 BARHL1Q9BZE3 327 aa7.54□□□□□ -1.2
NUP50-205ENST00000419387 BABAM2Q9NXR7 383 aa7.54□□□□□ -1.2
NUP50-205ENST00000419387 KIF25Q9UIL4 384 aa7.54□□□□□ -1.2
NUP50-205ENST00000419387 TGP01266 2768 aa7.54□□□□□ -1.2
NUP50-205ENST00000419387 PLXNB1O43157 2135 aa7.54□□□□□ -1.2
NUP50-205ENST00000419387 MEIKINA0A087WXM9 373 aa7.53□□□□□ -1.2
NUP50-205ENST00000419387 HSPB6O14558 160 aa7.53□□□□□ -1.2
NUP50-205ENST00000419387 HTR3BO95264 441 aa7.53□□□□□ -1.2
NUP50-205ENST00000419387 CD2P06729 351 aa7.53□□□□□ -1.2
NUP50-205ENST00000419387 LPLP06858 475 aa7.53□□□□□ -1.2
NUP50-205ENST00000419387 NFYBP25208 207 aa7.53□□□□□ -1.2
NUP50-205ENST00000419387 MNDAP41218 407 aa7.53□□□□□ -1.2
NUP50-205ENST00000419387 GLP1RP43220 463 aa7.53□□□□□ -1.2
NUP50-205ENST00000419387 OR3A4PP47883 348 aa7.53□□□□□ -1.2
NUP50-205ENST00000419387 KCNJ3P48549 501 aa7.53□□□□□ -1.2
NUP50-205ENST00000419387 RBM39Q14498 530 aaKnown RBP7.53□□□□□ -1.2
NUP50-205ENST00000419387 RSU1Q15404 277 aa7.53□□□□□ -1.2
NUP50-205ENST00000419387 ABCA11PQ4W5N1 156 aa7.53□□□□□ -1.2
NUP50-205ENST00000419387 FBLN7Q53RD9 439 aa7.53□□□□□ -1.2
NUP50-205ENST00000419387 OXLD1Q5BKU9 147 aa7.53□□□□□ -1.2
NUP50-205ENST00000419387 UTF1Q5T230 341 aa7.53□□□□□ -1.2
NUP50-205ENST00000419387 CCDC144NLQ6NUI1 221 aa7.53□□□□□ -1.2
NUP50-205ENST00000419387 TMPRSS11AQ6ZMR5 421 aa7.53□□□□□ -1.2
NUP50-205ENST00000419387 CENPVQ7Z7K6 275 aaPredicted RBP7.53□□□□□ -1.2
NUP50-205ENST00000419387 OR13A1Q8NGR1 328 aa7.53□□□□□ -1.2
NUP50-205ENST00000419387 OR10K1Q8NGX5 313 aa7.53□□□□□ -1.2
NUP50-205ENST00000419387 TMEM106AQ96A25 262 aa7.53□□□□□ -1.2
NUP50-205ENST00000419387 KIRREL1Q96J84 757 aa7.53□□□□□ -1.2
NUP50-205ENST00000419387 PGLYRP3Q96LB9 341 aa7.53□□□□□ -1.2
NUP50-205ENST00000419387 LINC00574Q9H8X3 128 aa7.53□□□□□ -1.2
NUP50-205ENST00000419387 TAS2R4Q9NYW5 299 aa7.53□□□□□ -1.2
NUP50-205ENST00000419387 CALYQ9NYX4 217 aa7.53□□□□□ -1.2
NUP50-205ENST00000419387 IDI2-AS1Q9NZ38 188 aa7.53□□□□□ -1.2
NUP50-205ENST00000419387 ING4Q9UNL4 249 aa7.53□□□□□ -1.2
NUP50-205ENST00000419387 EXOSC1Q9Y3B2 195 aaKnown RBP7.53□□□□□ -1.2
NUP50-205ENST00000419387 IRGMA1A4Y4 181 aa7.52□□□□□ -1.21
NUP50-205ENST00000419387 FAM90A18PA6NE21 464 aa7.52□□□□□ -1.21
NUP50-205ENST00000419387 FAM90A16PA6NEW6 464 aa7.52□□□□□ -1.21
NUP50-205ENST00000419387 FAM90A20PA6NIJ5 464 aa7.52□□□□□ -1.21
NUP50-205ENST00000419387 FAM90A9PA6NNJ1 464 aa7.52□□□□□ -1.21
NUP50-205ENST00000419387 FAM90A12PA8MX19 464 aa7.52□□□□□ -1.21
NUP50-205ENST00000419387 FAM90A5PA8MXJ8 464 aa7.52□□□□□ -1.21
NUP50-205ENST00000419387 NPIPB11E5RHQ5 1161 aa7.52□□□□□ -1.21
NUP50-205ENST00000419387 J3QR06 171 aa7.52□□□□□ -1.21
NUP50-205ENST00000419387 M0QZK8 103 aa7.52□□□□□ -1.21
NUP50-205ENST00000419387 CDRT1O95170 752 aa7.52□□□□□ -1.21
NUP50-205ENST00000419387 IL1AP01583 271 aa7.52□□□□□ -1.21
NUP50-205ENST00000419387 PRB2P02812 416 aaPredicted RBP7.52□□□□□ -1.21
NUP50-205ENST00000419387 AMY1AP04745 511 aa7.52□□□□□ -1.21
NUP50-205ENST00000419387 AMY2AP04746 511 aa7.52□□□□□ -1.21
NUP50-205ENST00000419387 FAM90A15PP0C7V4 464 aa7.52□□□□□ -1.21
NUP50-205ENST00000419387 FAM90A13PP0C7W8 464 aa7.52□□□□□ -1.21
NUP50-205ENST00000419387 FAM90A14PP0C7W9 464 aa7.52□□□□□ -1.21
NUP50-205ENST00000419387 FAM90A24PP0C7X0 464 aa7.52□□□□□ -1.21
NUP50-205ENST00000419387 FAM106CPP0CH98 169 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms