RNA–Protein interactions for RNA: ENST00000395066.7

CLK3-202, Transcript of CDC like kinase 3, humanhuman

TSL 1 (best) BASIC

Gene CLK3, Length 2,621 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-202ENST00000395066 HERPUD1Q15011 391 aa17.7■□□□□ 0.42
CLK3-202ENST00000395066 PYY3Q5JQD4 70 aa17.7■□□□□ 0.42
CLK3-202ENST00000395066 SPSB3Q6PJ21 355 aa17.7■□□□□ 0.42
CLK3-202ENST00000395066 CCDC71LQ8N9Z2 235 aa17.7■□□□□ 0.42
CLK3-202ENST00000395066 IL36GQ9NZH8 169 aa17.7■□□□□ 0.42
CLK3-202ENST00000395066 DNAJC13O75165 2243 aa17.7■□□□□ 0.42
CLK3-202ENST00000395066 ZDBF2Q9HCK1 2354 aa17.69■□□□□ 0.42
CLK3-202ENST00000395066 ZNF724A8MTY0 619 aa17.69■□□□□ 0.42
CLK3-202ENST00000395066 TAGLN2P37802 199 aaKnown RBP17.69■□□□□ 0.42
CLK3-202ENST00000395066 TMEM211Q6ICI0 200 aa17.69■□□□□ 0.42
CLK3-202ENST00000395066 ZNF695Q8IW36 515 aa17.69■□□□□ 0.42
CLK3-202ENST00000395066 KCNE4Q8WWG9 221 aa17.69■□□□□ 0.42
CLK3-202ENST00000395066 TMEM222Q9H0R3 208 aa17.69■□□□□ 0.42
CLK3-202ENST00000395066 S100A2P29034 98 aa17.69■□□□□ 0.42
CLK3-202ENST00000395066 UCP3P55916 312 aa17.69■□□□□ 0.42
CLK3-202ENST00000395066 RND3P61587 244 aa17.69■□□□□ 0.42
CLK3-202ENST00000395066 DPPA2Q7Z7J5 298 aa17.69■□□□□ 0.42
CLK3-202ENST00000395066 NEK7Q8TDX7 302 aa17.69■□□□□ 0.42
CLK3-202ENST00000395066 ZNF488Q96MN9 340 aa17.69■□□□□ 0.42
CLK3-202ENST00000395066 GLRX2Q9NS18 164 aa17.69■□□□□ 0.42
CLK3-202ENST00000395066 DOK5Q9P104 306 aa17.69■□□□□ 0.42
CLK3-202ENST00000395066 R4GN57 208 aa17.69■□□□□ 0.42
CLK3-202ENST00000395066 TRDCB7Z8K6 153 aa17.68■□□□□ 0.42
CLK3-202ENST00000395066 SLC34A2O95436 690 aa17.68■□□□□ 0.42
CLK3-202ENST00000395066 TMEM50AO95807 157 aa17.68■□□□□ 0.42
CLK3-202ENST00000395066 NKX2-1P43699 371 aaPredicted RBP17.68■□□□□ 0.42
CLK3-202ENST00000395066 UBE2KP61086 200 aa17.68■□□□□ 0.42
CLK3-202ENST00000395066 ARF1P84077 181 aaKnown RBP17.68■□□□□ 0.42
CLK3-202ENST00000395066 RUNX1Q01196 453 aa17.68■□□□□ 0.42
CLK3-202ENST00000395066 C9orf152Q5JTZ5 239 aa17.68■□□□□ 0.42
CLK3-202ENST00000395066 ZNF100Q8IYN0 542 aa17.68■□□□□ 0.42
CLK3-202ENST00000395066 PFDN5Q99471 154 aa17.68■□□□□ 0.42
CLK3-202ENST00000395066 C11orf1Q9H5F2 150 aa17.68■□□□□ 0.42
CLK3-202ENST00000395066 C5orf49A4QMS7 147 aa17.68■□□□□ 0.42
CLK3-202ENST00000395066 ATXN7O15265 892 aaPredicted RBP17.68■□□□□ 0.42
CLK3-202ENST00000395066 DNPH1O43598 174 aa17.68■□□□□ 0.42
CLK3-202ENST00000395066 SRP19P09132 144 aaKnown RBP17.68■□□□□ 0.42
CLK3-202ENST00000395066 EPHA1P21709 976 aa17.68■□□□□ 0.42
CLK3-202ENST00000395066 PRDX4Q13162 271 aa17.68■□□□□ 0.42
CLK3-202ENST00000395066 HAGHQ16775 308 aa17.68■□□□□ 0.42
CLK3-202ENST00000395066 ZNF674Q2M3X9 581 aa17.68■□□□□ 0.42
CLK3-202ENST00000395066 OR8G5Q8NG78 346 aa17.68■□□□□ 0.42
CLK3-202ENST00000395066 Q8WTZ3 238 aa17.68■□□□□ 0.42
CLK3-202ENST00000395066 HES7Q9BYE0 225 aa17.68■□□□□ 0.42
CLK3-202ENST00000395066 PRRG4Q9BZD6 226 aa17.68■□□□□ 0.42
CLK3-202ENST00000395066 OR51B6Q9H340 312 aa17.68■□□□□ 0.42
CLK3-202ENST00000395066 CCL28Q9NRJ3 127 aa17.68■□□□□ 0.42
CLK3-202ENST00000395066 GAR1Q9NY12 217 aaKnown RBP17.68■□□□□ 0.42
CLK3-202ENST00000395066 TREM2Q9NZC2 230 aa17.68■□□□□ 0.42
CLK3-202ENST00000395066 KIAA1456Q9P272 454 aa17.68■□□□□ 0.42
CLK3-202ENST00000395066 PRRC2CQ9Y520 2896 aaKnown RBP17.68■□□□□ 0.42
CLK3-202ENST00000395066 RPL36A-HNRNPH2H7BZ11 118 aa17.68■□□□□ 0.42
CLK3-202ENST00000395066 PITX3O75364 302 aa17.68■□□□□ 0.42
CLK3-202ENST00000395066 PCBD1P61457 104 aa17.68■□□□□ 0.42
CLK3-202ENST00000395066 ELOBQ15370 118 aa17.68■□□□□ 0.42
CLK3-202ENST00000395066 ZNF343Q6P1L6 599 aa17.68■□□□□ 0.42
CLK3-202ENST00000395066 LIPGQ9Y5X9 500 aa17.68■□□□□ 0.42
CLK3-202ENST00000395066 A0A087WWC5 75 aa17.67■□□□□ 0.42
CLK3-202ENST00000395066 BTBD17A6NE02 478 aa17.67■□□□□ 0.42
CLK3-202ENST00000395066 H0YL77 283 aa17.67■□□□□ 0.42
CLK3-202ENST00000395066 NDUFS6O75380 124 aaKnown RBP17.67■□□□□ 0.42
CLK3-202ENST00000395066 CDS2O95674 445 aa17.67■□□□□ 0.42
CLK3-202ENST00000395066 NGFP01138 241 aa17.67■□□□□ 0.42
CLK3-202ENST00000395066 CXCL1P09341 107 aa17.67■□□□□ 0.42
CLK3-202ENST00000395066 ODF3L1Q8IXM7 274 aa17.67■□□□□ 0.42
CLK3-202ENST00000395066 SELENOHQ8IZQ5 122 aaKnown RBP17.67■□□□□ 0.42
CLK3-202ENST00000395066 ZNF610Q8N9Z0 462 aa17.67■□□□□ 0.42
CLK3-202ENST00000395066 C1QTNF5Q9BXJ0 243 aa17.67■□□□□ 0.42
CLK3-202ENST00000395066 MTCH1Q9NZJ7 389 aa17.67■□□□□ 0.42
CLK3-202ENST00000395066 IGKV1-6A0A0C4DH72 117 aa17.67■□□□□ 0.42
CLK3-202ENST00000395066 PROB1E7EW31 1015 aa17.67■□□□□ 0.42
CLK3-202ENST00000395066 LPAL2Q16609 132 aa17.67■□□□□ 0.42
CLK3-202ENST00000395066 IZUMO4Q1ZYL8 232 aa17.67■□□□□ 0.42
CLK3-202ENST00000395066 TRIM61Q5EBN2 209 aa17.67■□□□□ 0.42
CLK3-202ENST00000395066 OR5C1Q8NGR4 320 aa17.67■□□□□ 0.42
CLK3-202ENST00000395066 CALHM2Q9HA72 323 aa17.67■□□□□ 0.42
CLK3-202ENST00000395066 TCFL5Q9UL49 500 aa17.67■□□□□ 0.42
CLK3-202ENST00000395066 SLC22A20A6NK97 555 aa17.66■□□□□ 0.42
CLK3-202ENST00000395066 DLK1P80370 383 aa17.66■□□□□ 0.42
CLK3-202ENST00000395066 TIPARPQ7Z3E1 657 aaKnown RBP17.66■□□□□ 0.42
CLK3-202ENST00000395066 ZNF429Q86V71 674 aa17.66■□□□□ 0.42
CLK3-202ENST00000395066 H3BP45 60 aa17.66■□□□□ 0.42
CLK3-202ENST00000395066 SYNGR1O43759 233 aa17.66■□□□□ 0.42
CLK3-202ENST00000395066 CYTIPO60759 359 aa17.66■□□□□ 0.42
CLK3-202ENST00000395066 MRPL33O75394 65 aaKnown RBP17.66■□□□□ 0.42
CLK3-202ENST00000395066 C20orf204Q6ZNR8 217 aa17.66■□□□□ 0.42
CLK3-202ENST00000395066 OPA3Q9H6K4 179 aa17.66■□□□□ 0.42
CLK3-202ENST00000395066 PLEKHF2Q9H8W4 249 aa17.66■□□□□ 0.42
CLK3-202ENST00000395066 Q9N2K0 584 aa17.66■□□□□ 0.42
CLK3-202ENST00000395066 URGCP-MRPS24S4R325 110 aa17.66■□□□□ 0.42
CLK3-202ENST00000395066 TNRC6BQ9UPQ9 1833 aaKnown RBP17.65■□□□□ 0.42
CLK3-202ENST00000395066 HSPA12AO43301 675 aa17.65■□□□□ 0.42
CLK3-202ENST00000395066 LILRA1O75019 489 aa17.65■□□□□ 0.42
CLK3-202ENST00000395066 TK1P04183 234 aa17.65■□□□□ 0.42
CLK3-202ENST00000395066 DYNLT3P51808 116 aa17.65■□□□□ 0.42
CLK3-202ENST00000395066 RIPPLY2Q5TAB7 128 aa17.65■□□□□ 0.42
CLK3-202ENST00000395066 TUSC5Q8IXB3 177 aa17.65■□□□□ 0.42
CLK3-202ENST00000395066 TMEM252Q8N6L7 170 aa17.65■□□□□ 0.42
CLK3-202ENST00000395066 ZNF383Q8NA42 475 aa17.65■□□□□ 0.42
CLK3-202ENST00000395066 SPSB4Q96A44 273 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms