RNA–Protein interactions for RNA: ENST00000379516.6

SNX2-201, Transcript of sorting nexin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX2, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-201ENST00000379516 OR4A4PQ8NGN8 299 aa12.72□□□□□ -0.37
SNX2-201ENST00000379516 VRK1Q99986 396 aaPredicted RBP12.72□□□□□ -0.37
SNX2-201ENST00000379516 GLS2Q9UI32 602 aa12.72□□□□□ -0.37
SNX2-201ENST00000379516 TRAPPC2LQ9UL33 140 aa12.72□□□□□ -0.37
SNX2-201ENST00000379516 TRAV39A0A0B4J263 110 aa12.71□□□□□ -0.37
SNX2-201ENST00000379516 A0A1B0GWJ7 208 aa12.71□□□□□ -0.37
SNX2-201ENST00000379516 H7C1Q1 480 aa12.71□□□□□ -0.37
SNX2-201ENST00000379516 IFNA21P01568 189 aa12.71□□□□□ -0.37
SNX2-201ENST00000379516 ZNF345Q14585 488 aa12.71□□□□□ -0.37
SNX2-201ENST00000379516 ZNF497Q6ZNH5 498 aa12.71□□□□□ -0.37
SNX2-201ENST00000379516 ACOT7LQ6ZUV0 252 aa12.71□□□□□ -0.37
SNX2-201ENST00000379516 KCNRGQ8N5I3 272 aa12.71□□□□□ -0.37
SNX2-201ENST00000379516 SUCNR1Q9BXA5 334 aa12.71□□□□□ -0.37
SNX2-201ENST00000379516 PCDHB10Q9UN67 800 aa12.71□□□□□ -0.37
SNX2-201ENST00000379516 RNF222A6NCQ9 220 aa12.71□□□□□ -0.38
SNX2-201ENST00000379516 ATP6V1G2-DDX39BF2Z307 99 aa12.71□□□□□ -0.38
SNX2-201ENST00000379516 KCNAB3O43448 404 aa12.71□□□□□ -0.38
SNX2-201ENST00000379516 TUSC2O75896 110 aa12.71□□□□□ -0.38
SNX2-201ENST00000379516 IGHV3-13P01766 116 aa12.71□□□□□ -0.38
SNX2-201ENST00000379516 CCKARP32238 428 aa12.71□□□□□ -0.38
SNX2-201ENST00000379516 KLF3P57682 345 aaPredicted RBP12.71□□□□□ -0.38
SNX2-201ENST00000379516 NKX6-1P78426 367 aaPredicted RBP12.71□□□□□ -0.38
SNX2-201ENST00000379516 IAH1Q2TAA2 248 aaPredicted RBP12.71□□□□□ -0.38
SNX2-201ENST00000379516 SHEQ5VZ18 495 aa12.71□□□□□ -0.38
SNX2-201ENST00000379516 PCSK4Q6UW60 755 aa12.71□□□□□ -0.38
SNX2-201ENST00000379516 ACP7Q6ZNF0 438 aa12.71□□□□□ -0.38
SNX2-201ENST00000379516 OR10J5Q8NHC4 309 aa12.71□□□□□ -0.38
SNX2-201ENST00000379516 PCNPQ8WW12 178 aaKnown RBP12.71□□□□□ -0.38
SNX2-201ENST00000379516 IL1F10Q8WWZ1 152 aa12.71□□□□□ -0.38
SNX2-201ENST00000379516 DCUN1D4Q92564 292 aa12.71□□□□□ -0.38
SNX2-201ENST00000379516 KIRREL1Q96J84 757 aa12.71□□□□□ -0.38
SNX2-201ENST00000379516 RNF126Q9BV68 326 aa12.71□□□□□ -0.38
SNX2-201ENST00000379516 SLC5A7Q9GZV3 580 aa12.71□□□□□ -0.38
SNX2-201ENST00000379516 MAP1BP46821 2468 aaKnown RBP12.71□□□□□ -0.38
SNX2-201ENST00000379516 RP1L1Q8IWN7 2480 aaPredicted RBP12.7□□□□□ -0.38
SNX2-201ENST00000379516 IGKV1D-13A0A0B4J2D9 117 aa12.7□□□□□ -0.38
SNX2-201ENST00000379516 H0YIZ8 118 aa12.7□□□□□ -0.38
SNX2-201ENST00000379516 C16orf97H3BN30 126 aa12.7□□□□□ -0.38
SNX2-201ENST00000379516 PHF1O43189 567 aaPredicted RBP12.7□□□□□ -0.38
SNX2-201ENST00000379516 IGKV1-13P0DP09 117 aa12.7□□□□□ -0.38
SNX2-201ENST00000379516 KCNJ3P48549 501 aa12.7□□□□□ -0.38
SNX2-201ENST00000379516 RBPJQ06330 500 aa12.7□□□□□ -0.38
SNX2-201ENST00000379516 GGNBP1Q5YKI7 109 aa12.7□□□□□ -0.38
SNX2-201ENST00000379516 FAM219AQ8IW50 185 aa12.7□□□□□ -0.38
SNX2-201ENST00000379516 PRR18Q8N4B5 295 aa12.7□□□□□ -0.38
SNX2-201ENST00000379516 MRPL24Q96A35 216 aaKnown RBP12.7□□□□□ -0.38
SNX2-201ENST00000379516 ELOVL5Q9NYP7 299 aa12.7□□□□□ -0.38
SNX2-201ENST00000379516 TAAR3PQ9P1P4 343 aa12.7□□□□□ -0.38
SNX2-201ENST00000379516 MEMO1Q9Y316 297 aa12.7□□□□□ -0.38
SNX2-201ENST00000379516 TRBV6-7A0A0A0MS04 114 aa12.7□□□□□ -0.38
SNX2-201ENST00000379516 KANTRA0A1W2PQU2 76 aa12.7□□□□□ -0.38
SNX2-201ENST00000379516 HSD17B6O14756 317 aa12.7□□□□□ -0.38
SNX2-201ENST00000379516 MPPED1O15442 326 aa12.7□□□□□ -0.38
SNX2-201ENST00000379516 PSPNO60542 156 aa12.7□□□□□ -0.38
SNX2-201ENST00000379516 CD40P25942 277 aa12.7□□□□□ -0.38
SNX2-201ENST00000379516 RAB14P61106 215 aa12.7□□□□□ -0.38
SNX2-201ENST00000379516 RAB32Q13637 225 aa12.7□□□□□ -0.38
SNX2-201ENST00000379516 LIAT1Q6ZQX7 453 aa12.7□□□□□ -0.38
SNX2-201ENST00000379516 ZNF818PQ6ZRF7 136 aa12.7□□□□□ -0.38
SNX2-201ENST00000379516 MOB1BQ7L9L4 216 aa12.7□□□□□ -0.38
SNX2-201ENST00000379516 SLC51BQ86UW2 128 aa12.7□□□□□ -0.38
SNX2-201ENST00000379516 FAM185AQ8N0U4 392 aa12.7□□□□□ -0.38
SNX2-201ENST00000379516 RELL2Q8NC24 303 aaPredicted RBP12.7□□□□□ -0.38
SNX2-201ENST00000379516 GLYATL2Q8WU03 294 aa12.7□□□□□ -0.38
SNX2-201ENST00000379516 TMEM171Q8WVE6 324 aa12.7□□□□□ -0.38
SNX2-201ENST00000379516 C3orf85A0A1B0GTC6 90 aa12.69□□□□□ -0.38
SNX2-201ENST00000379516 ZSCAN5BA6NJL1 495 aa12.69□□□□□ -0.38
SNX2-201ENST00000379516 POM121CA8CG34 1229 aa12.69□□□□□ -0.38
SNX2-201ENST00000379516 GPR31O00270 319 aa12.69□□□□□ -0.38
SNX2-201ENST00000379516 SPDEFO95238 335 aa12.69□□□□□ -0.38
SNX2-201ENST00000379516 LMO1P25800 156 aa12.69□□□□□ -0.38
SNX2-201ENST00000379516 S100A10P60903 97 aa12.69□□□□□ -0.38
SNX2-201ENST00000379516 CLLU1Q5K131 121 aa12.69□□□□□ -0.38
SNX2-201ENST00000379516 C6orf183Q5T699 404 aa12.69□□□□□ -0.38
SNX2-201ENST00000379516 ALKAL2Q6UX46 152 aa12.69□□□□□ -0.38
SNX2-201ENST00000379516 LYZL2Q7Z4W2 148 aa12.69□□□□□ -0.38
SNX2-201ENST00000379516 TBC1D26Q86UD7 250 aa12.69□□□□□ -0.38
SNX2-201ENST00000379516 GAPTQ8N292 157 aa12.69□□□□□ -0.38
SNX2-201ENST00000379516 LRRC29Q8WV35 223 aa12.69□□□□□ -0.38
SNX2-201ENST00000379516 MSI2Q96DH6 328 aaKnown RBP12.69□□□□□ -0.38
SNX2-201ENST00000379516 TP53RKQ96S44 253 aa12.69□□□□□ -0.38
SNX2-201ENST00000379516 CABLES2Q9BTV7 478 aa12.69□□□□□ -0.38
SNX2-201ENST00000379516 GSX2Q9BZM3 304 aa12.69□□□□□ -0.38
SNX2-201ENST00000379516 RPS10-NUDT3A0A1W2PQS6 291 aa12.68□□□□□ -0.38
SNX2-201ENST00000379516 C1QTNF9BB2RNN3 333 aa12.68□□□□□ -0.38
SNX2-201ENST00000379516 PTBP3O95758 552 aaKnown RBP12.68□□□□□ -0.38
SNX2-201ENST00000379516 TFF1P04155 84 aa12.68□□□□□ -0.38
SNX2-201ENST00000379516 CD200P41217 278 aa12.68□□□□□ -0.38
SNX2-201ENST00000379516 RPS23P62266 143 aaKnown RBP12.68□□□□□ -0.38
SNX2-201ENST00000379516 IL15RAQ13261 267 aa12.68□□□□□ -0.38
SNX2-201ENST00000379516 SMIM21Q3B7S5 101 aa12.68□□□□□ -0.38
SNX2-201ENST00000379516 C1QTNF12Q5T7M4 302 aa12.68□□□□□ -0.38
SNX2-201ENST00000379516 PRSS54Q6PEW0 395 aa12.68□□□□□ -0.38
SNX2-201ENST00000379516 LGI3Q8N145 548 aa12.68□□□□□ -0.38
SNX2-201ENST00000379516 LRTM2Q8N967 370 aa12.68□□□□□ -0.38
SNX2-201ENST00000379516 CITED4Q96RK1 184 aa12.68□□□□□ -0.38
SNX2-201ENST00000379516 CCL28Q9NRJ3 127 aa12.68□□□□□ -0.38
SNX2-201ENST00000379516 OR5AC2Q9NZP5 309 aa12.68□□□□□ -0.38
SNX2-201ENST00000379516 OR1A1Q9P1Q5 309 aa12.68□□□□□ -0.38
SNX2-201ENST00000379516 OR2W1Q9Y3N9 320 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms