RNA–Protein interactions for RNA: ENST00000378244.6

DEPDC4-202, Transcript of DEP domain containing 4, humanhuman

TSL 2

Gene DEPDC4, Length 2,337 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-202ENST00000378244 GPR157Q5UAW9 335 aa9.61□□□□□ -0.87
DEPDC4-202ENST00000378244 RSBN1Q5VWQ0 802 aaPredicted RBP9.61□□□□□ -0.87
DEPDC4-202ENST00000378244 PNKDQ8N490 385 aa9.61□□□□□ -0.87
DEPDC4-202ENST00000378244 PRR18Q8N4B5 295 aa9.61□□□□□ -0.87
DEPDC4-202ENST00000378244 ZNF565Q8N9K5 539 aa9.61□□□□□ -0.87
DEPDC4-202ENST00000378244 TM2D1Q9BX74 207 aa9.61□□□□□ -0.87
DEPDC4-202ENST00000378244 ATG5Q9H1Y0 275 aa9.61□□□□□ -0.87
DEPDC4-202ENST00000378244 IFT22Q9H7X7 185 aa9.61□□□□□ -0.87
DEPDC4-202ENST00000378244 METTL8Q9H825 291 aaKnown RBP9.61□□□□□ -0.87
DEPDC4-202ENST00000378244 RCC2Q9P258 522 aaKnown RBP9.61□□□□□ -0.87
DEPDC4-202ENST00000378244 LINC00312Q9Y6C7 94 aa9.61□□□□□ -0.87
DEPDC4-202ENST00000378244 CENPVL3A0A0U1RRI6 287 aa9.61□□□□□ -0.87
DEPDC4-202ENST00000378244 FUOMA2VDF0 154 aa9.61□□□□□ -0.87
DEPDC4-202ENST00000378244 MMP23AO75900 390 aa9.61□□□□□ -0.87
DEPDC4-202ENST00000378244 SCGB1D2O95969 90 aa9.61□□□□□ -0.87
DEPDC4-202ENST00000378244 IL1AP01583 271 aa9.61□□□□□ -0.87
DEPDC4-202ENST00000378244 IGHV3-7P01780 117 aa9.61□□□□□ -0.87
DEPDC4-202ENST00000378244 COX7A1P24310 79 aa9.61□□□□□ -0.87
DEPDC4-202ENST00000378244 CHATP28329 748 aa9.61□□□□□ -0.87
DEPDC4-202ENST00000378244 ERP29P30040 261 aaKnown RBP9.61□□□□□ -0.87
DEPDC4-202ENST00000378244 TMEM50BP56557 158 aa9.61□□□□□ -0.87
DEPDC4-202ENST00000378244 MEF2CQ06413 473 aaPredicted RBP9.61□□□□□ -0.87
DEPDC4-202ENST00000378244 RBM39Q14498 530 aaKnown RBP9.61□□□□□ -0.87
DEPDC4-202ENST00000378244 BCL6BQ8N143 479 aaPredicted RBP9.61□□□□□ -0.87
DEPDC4-202ENST00000378244 ARHGAP5-AS1Q96IT6 56 aa9.61□□□□□ -0.87
DEPDC4-202ENST00000378244 DCSTAMPQ9H295 470 aa9.61□□□□□ -0.87
DEPDC4-202ENST00000378244 RAB22AQ9UL26 194 aa9.61□□□□□ -0.87
DEPDC4-202ENST00000378244 RNASEK-C17orf49H0YIS7 233 aa9.6□□□□□ -0.87
DEPDC4-202ENST00000378244 RCC1P18754 421 aaPredicted RBP9.6□□□□□ -0.87
DEPDC4-202ENST00000378244 EPHA1P21709 976 aa9.6□□□□□ -0.87
DEPDC4-202ENST00000378244 CDK2P24941 298 aa9.6□□□□□ -0.87
DEPDC4-202ENST00000378244 SSTR5P35346 364 aa9.6□□□□□ -0.87
DEPDC4-202ENST00000378244 OLFML2AQ68BL7 652 aa9.6□□□□□ -0.87
DEPDC4-202ENST00000378244 BAIAP2L2Q6UXY1 529 aa9.6□□□□□ -0.87
DEPDC4-202ENST00000378244 LPAR3Q9UBY5 353 aa9.6□□□□□ -0.87
DEPDC4-202ENST00000378244 ZNF69Q9UC07 566 aa9.6□□□□□ -0.87
DEPDC4-202ENST00000378244 TRAPPC2LQ9UL33 140 aa9.6□□□□□ -0.87
DEPDC4-202ENST00000378244 hCG_1809904A0A1W2PP81 198 aa9.6□□□□□ -0.87
DEPDC4-202ENST00000378244 A0A1W2PPE2 198 aa9.6□□□□□ -0.87
DEPDC4-202ENST00000378244 A0A1W2PR64 198 aa9.6□□□□□ -0.87
DEPDC4-202ENST00000378244 A0A1W2PRV1 198 aa9.6□□□□□ -0.87
DEPDC4-202ENST00000378244 TMEM30CPA0ZSE6 113 aa9.6□□□□□ -0.87
DEPDC4-202ENST00000378244 FAM90A10PA6NDY2 464 aa9.6□□□□□ -0.87
DEPDC4-202ENST00000378244 FAM90A18PA6NE21 464 aa9.6□□□□□ -0.87
DEPDC4-202ENST00000378244 FAM90A16PA6NEW6 464 aa9.6□□□□□ -0.87
DEPDC4-202ENST00000378244 FAM90A20PA6NIJ5 464 aa9.6□□□□□ -0.87
DEPDC4-202ENST00000378244 FAM90A8PA6NJQ4 464 aa9.6□□□□□ -0.87
DEPDC4-202ENST00000378244 FAM90A7PA6NKC0 464 aa9.6□□□□□ -0.87
DEPDC4-202ENST00000378244 FAM90A22PA8MWA6 464 aa9.6□□□□□ -0.87
DEPDC4-202ENST00000378244 FAM90A12PA8MX19 464 aa9.6□□□□□ -0.87
DEPDC4-202ENST00000378244 FAM90A5PA8MXJ8 464 aa9.6□□□□□ -0.87
DEPDC4-202ENST00000378244 FAM90A23PA8MXZ1 464 aa9.6□□□□□ -0.87
DEPDC4-202ENST00000378244 M0R1W7 72 aa9.6□□□□□ -0.87
DEPDC4-202ENST00000378244 FAM90A15PP0C7V4 464 aa9.6□□□□□ -0.87
DEPDC4-202ENST00000378244 FAM90A13PP0C7W8 464 aa9.6□□□□□ -0.87
DEPDC4-202ENST00000378244 FAM90A14PP0C7W9 464 aa9.6□□□□□ -0.87
DEPDC4-202ENST00000378244 FAM90A24PP0C7X0 464 aa9.6□□□□□ -0.87
DEPDC4-202ENST00000378244 FAM157CP0CG43 387 aa9.6□□□□□ -0.87
DEPDC4-202ENST00000378244 CFPP27918 469 aa9.6□□□□□ -0.87
DEPDC4-202ENST00000378244 SPCS2Q15005 226 aa9.6□□□□□ -0.87
DEPDC4-202ENST00000378244 PLAC9Q5JTB6 97 aa9.6□□□□□ -0.87
DEPDC4-202ENST00000378244 PRAMEF5Q5TYX0 476 aa9.6□□□□□ -0.87
DEPDC4-202ENST00000378244 Q6ZTK2 550 aa9.6□□□□□ -0.87
DEPDC4-202ENST00000378244 C5orf24Q7Z6I8 188 aa9.6□□□□□ -0.87
DEPDC4-202ENST00000378244 FAM89BQ8N5H3 189 aa9.6□□□□□ -0.87
DEPDC4-202ENST00000378244 DTX3Q8N9I9 347 aa9.6□□□□□ -0.87
DEPDC4-202ENST00000378244 OR56B1Q8NGI3 324 aa9.6□□□□□ -0.87
DEPDC4-202ENST00000378244 SLC25A46Q96AG3 418 aa9.6□□□□□ -0.87
DEPDC4-202ENST00000378244 HDHD3Q9BSH5 251 aaPredicted RBP9.6□□□□□ -0.87
DEPDC4-202ENST00000378244 MS4A7Q9GZW8 240 aaPredicted RBP9.6□□□□□ -0.87
DEPDC4-202ENST00000378244 OR6C3Q9NZP0 311 aa9.6□□□□□ -0.87
DEPDC4-202ENST00000378244 NUP50Q9UKX7 468 aa9.6□□□□□ -0.87
DEPDC4-202ENST00000378244 METTL21EPA6NDL7 271 aa9.59□□□□□ -0.87
DEPDC4-202ENST00000378244 MT-ND4P03905 459 aa9.59□□□□□ -0.87
DEPDC4-202ENST00000378244 PRTN3P24158 256 aa9.59□□□□□ -0.87
DEPDC4-202ENST00000378244 NFYBP25208 207 aa9.59□□□□□ -0.87
DEPDC4-202ENST00000378244 PAX6P26367 422 aa9.59□□□□□ -0.87
DEPDC4-202ENST00000378244 KCNJ3P48549 501 aa9.59□□□□□ -0.87
DEPDC4-202ENST00000378244 DLX6P56179 175 aa9.59□□□□□ -0.87
DEPDC4-202ENST00000378244 SRSF2Q01130 221 aaKnown RBP9.59□□□□□ -0.87
DEPDC4-202ENST00000378244 ZNF497Q6ZNH5 498 aa9.59□□□□□ -0.87
DEPDC4-202ENST00000378244 KIR3DL3Q8N743 410 aa9.59□□□□□ -0.87
DEPDC4-202ENST00000378244 TNFRSF14Q92956 283 aa9.59□□□□□ -0.87
DEPDC4-202ENST00000378244 RAB3CQ96E17 227 aa9.59□□□□□ -0.87
DEPDC4-202ENST00000378244 FBLN5Q9UBX5 448 aa9.59□□□□□ -0.87
DEPDC4-202ENST00000378244 RAB27BO00194 218 aa9.59□□□□□ -0.87
DEPDC4-202ENST00000378244 IGHV1-8P0DP01 117 aa9.59□□□□□ -0.87
DEPDC4-202ENST00000378244 GNB3P16520 340 aa9.59□□□□□ -0.87
DEPDC4-202ENST00000378244 HOXB4P17483 251 aaPredicted RBP9.59□□□□□ -0.87
DEPDC4-202ENST00000378244 GDNFP39905 211 aa9.59□□□□□ -0.87
DEPDC4-202ENST00000378244 UTF1Q5T230 341 aa9.59□□□□□ -0.87
DEPDC4-202ENST00000378244 SLC35E4Q6ICL7 350 aa9.59□□□□□ -0.87
DEPDC4-202ENST00000378244 C16orf54Q6UWD8 224 aa9.59□□□□□ -0.87
DEPDC4-202ENST00000378244 USP43Q70EL4 1123 aa9.59□□□□□ -0.87
DEPDC4-202ENST00000378244 PIP4P2Q8N4L2 257 aa9.59□□□□□ -0.87
DEPDC4-202ENST00000378244 SETD6Q8TBK2 473 aa9.59□□□□□ -0.87
DEPDC4-202ENST00000378244 GAL3ST2Q9H3Q3 398 aa9.59□□□□□ -0.87
DEPDC4-202ENST00000378244 CHMP1AQ9HD42 196 aaPredicted RBP9.59□□□□□ -0.87
DEPDC4-202ENST00000378244 RHBDL2Q9NX52 303 aa9.59□□□□□ -0.87
DEPDC4-202ENST00000378244 COMMD3Q9UBI1 195 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms