RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 GPR37O15354 613 aa21.67■■□□□ 1.06
C9orf40-201ENST00000376854 EIF3GO75821 320 aaKnown RBP eCLIP21.67■■□□□ 1.06
C9orf40-201ENST00000376854 TUSC2O75896 110 aa21.67■■□□□ 1.06
C9orf40-201ENST00000376854 CELA3AP09093 270 aa21.67■■□□□ 1.06
C9orf40-201ENST00000376854 KIR2DS4P43632 304 aa21.67■■□□□ 1.06
C9orf40-201ENST00000376854 LHX2P50458 406 aa21.67■■□□□ 1.06
C9orf40-201ENST00000376854 KIR2DS1Q14954 304 aa21.67■■□□□ 1.06
C9orf40-201ENST00000376854 MPV17LQ2QL34 196 aa21.67■■□□□ 1.06
C9orf40-201ENST00000376854 DEFB123Q8N688 67 aa21.67■■□□□ 1.06
C9orf40-201ENST00000376854 CCL28Q9NRJ3 127 aa21.67■■□□□ 1.06
C9orf40-201ENST00000376854 A0A1B0GW64 132 aa21.66■■□□□ 1.06
C9orf40-201ENST00000376854 ZNF503-AS2A6NEH8 195 aa21.66■■□□□ 1.06
C9orf40-201ENST00000376854 PROB1E7EW31 1015 aa21.66■■□□□ 1.06
C9orf40-201ENST00000376854 RHEBQ15382 184 aa21.66■■□□□ 1.06
C9orf40-201ENST00000376854 MKXQ8IYA7 352 aa21.66■■□□□ 1.06
C9orf40-201ENST00000376854 ZFP62Q8NB50 900 aaPredicted RBP21.66■■□□□ 1.06
C9orf40-201ENST00000376854 APOBEC3DQ96AK3 386 aaPredicted RBP21.66■■□□□ 1.06
C9orf40-201ENST00000376854 ABHD14BQ96IU4 210 aa21.66■■□□□ 1.06
C9orf40-201ENST00000376854 IGKV1-6A0A0C4DH72 117 aa21.66■■□□□ 1.06
C9orf40-201ENST00000376854 UCP1P25874 307 aa21.66■■□□□ 1.06
C9orf40-201ENST00000376854 NMSQ5H8A3 153 aa21.66■■□□□ 1.06
C9orf40-201ENST00000376854 ZNF561Q8N587 486 aa21.66■■□□□ 1.06
C9orf40-201ENST00000376854 OR5C1Q8NGR4 320 aa21.66■■□□□ 1.06
C9orf40-201ENST00000376854 OR1J1Q8NGS3 322 aa21.66■■□□□ 1.06
C9orf40-201ENST00000376854 TAAR9Q96RI9 348 aa21.66■■□□□ 1.06
C9orf40-201ENST00000376854 RARRES2Q99969 163 aa21.66■■□□□ 1.06
C9orf40-201ENST00000376854 ABHD14AQ9BUJ0 271 aa21.66■■□□□ 1.06
C9orf40-201ENST00000376854 GLRX2Q9NS18 164 aa21.66■■□□□ 1.06
C9orf40-201ENST00000376854 ATP23Q9Y6H3 246 aa21.66■■□□□ 1.06
C9orf40-201ENST00000376854 AHCTF1Q8WYP5 2266 aa21.66■■□□□ 1.06
C9orf40-201ENST00000376854 DOCK10Q96BY6 2186 aa21.65■■□□□ 1.06
C9orf40-201ENST00000376854 DUXBA0A1W2PPF3 345 aa21.65■■□□□ 1.06
C9orf40-201ENST00000376854 VDAC1P21796 283 aa21.65■■□□□ 1.06
C9orf40-201ENST00000376854 OR2M7Q8NG81 312 aa21.65■■□□□ 1.06
C9orf40-201ENST00000376854 SNIP1Q8TAD8 396 aaKnown RBP21.65■■□□□ 1.06
C9orf40-201ENST00000376854 FAM173AQ9BQD7 235 aa21.65■■□□□ 1.06
C9orf40-201ENST00000376854 ZNF703Q9H7S9 590 aaPredicted RBP21.65■■□□□ 1.06
C9orf40-201ENST00000376854 CLEC18AA5D8T8 446 aa21.64■■□□□ 1.06
C9orf40-201ENST00000376854 CDRT15L2A8MXV6 281 aa21.64■■□□□ 1.06
C9orf40-201ENST00000376854 S100A6P06703 90 aa21.64■■□□□ 1.06
C9orf40-201ENST00000376854 CTXN2P0C2S0 81 aa21.64■■□□□ 1.06
C9orf40-201ENST00000376854 AGAP20933 346 aa21.64■■□□□ 1.06
C9orf40-201ENST00000376854 SULT1A1P50225 295 aa21.64■■□□□ 1.06
C9orf40-201ENST00000376854 EIF2S3LQ2VIR3 472 aaKnown RBP21.64■■□□□ 1.06
C9orf40-201ENST00000376854 CMTM1Q8IZ96 169 aa21.64■■□□□ 1.06
C9orf40-201ENST00000376854 CLEC18CQ8NCF0 446 aa21.64■■□□□ 1.06
C9orf40-201ENST00000376854 SIGLEC12Q96PQ1 595 aa21.64■■□□□ 1.06
C9orf40-201ENST00000376854 NCOR1O75376 2440 aa21.64■■□□□ 1.06
C9orf40-201ENST00000376854 HSPA12AO43301 675 aa21.64■■□□□ 1.05
C9orf40-201ENST00000376854 SYNGR1O43759 233 aa21.64■■□□□ 1.05
C9orf40-201ENST00000376854 NGFP01138 241 aa21.64■■□□□ 1.05
C9orf40-201ENST00000376854 COX5BP10606 129 aa21.64■■□□□ 1.05
C9orf40-201ENST00000376854 CLDN18P56856 261 aa21.64■■□□□ 1.05
C9orf40-201ENST00000376854 CCL20P78556 96 aa21.64■■□□□ 1.05
C9orf40-201ENST00000376854 HIST1H2AAQ96QV6 131 aa21.64■■□□□ 1.05
C9orf40-201ENST00000376854 ZNF552Q9H707 407 aaPredicted RBP21.64■■□□□ 1.05
C9orf40-201ENST00000376854 C5orf52A6NGY3 159 aa21.63■■□□□ 1.05
C9orf40-201ENST00000376854 TNFSF12O43508 249 aa21.63■■□□□ 1.05
C9orf40-201ENST00000376854 CST7O76096 145 aa21.63■■□□□ 1.05
C9orf40-201ENST00000376854 NXPH3O95157 252 aa21.63■■□□□ 1.05
C9orf40-201ENST00000376854 TMEM50AO95807 157 aa21.63■■□□□ 1.05
C9orf40-201ENST00000376854 DYNLT3P51808 116 aa21.63■■□□□ 1.05
C9orf40-201ENST00000376854 ID3Q02535 119 aa21.63■■□□□ 1.05
C9orf40-201ENST00000376854 SUMF2Q8NBJ7 301 aa21.63■■□□□ 1.05
C9orf40-201ENST00000376854 SLC33A1O00400 549 aaPredicted RBP21.63■■□□□ 1.05
C9orf40-201ENST00000376854 NEURL1O76050 574 aa21.63■■□□□ 1.05
C9orf40-201ENST00000376854 SYNGR4O95473 234 aa21.63■■□□□ 1.05
C9orf40-201ENST00000376854 ARG1P05089 322 aa21.63■■□□□ 1.05
C9orf40-201ENST00000376854 RAB5AP20339 215 aa21.63■■□□□ 1.05
C9orf40-201ENST00000376854 ITGA3P26006 1051 aa21.63■■□□□ 1.05
C9orf40-201ENST00000376854 SOHLH1Q5JUK2 328 aa21.63■■□□□ 1.05
C9orf40-201ENST00000376854 ODF3L1Q8IXM7 274 aa21.63■■□□□ 1.05
C9orf40-201ENST00000376854 TMEM217Q8N7C4 229 aa21.63■■□□□ 1.05
C9orf40-201ENST00000376854 OR5A2Q8NGI9 324 aa21.63■■□□□ 1.05
C9orf40-201ENST00000376854 PLPPR1Q8TBJ4 325 aa21.63■■□□□ 1.05
C9orf40-201ENST00000376854 B4GALT7Q9UBV7 327 aa21.63■■□□□ 1.05
C9orf40-201ENST00000376854 FAM24BQ8N5W8 94 aa21.62■■□□□ 1.05
C9orf40-201ENST00000376854 IL22RA1Q8N6P7 574 aa21.62■■□□□ 1.05
C9orf40-201ENST00000376854 HES7Q9BYE0 225 aa21.62■■□□□ 1.05
C9orf40-201ENST00000376854 ARRDC1-AS1Q9H2J1 176 aa21.62■■□□□ 1.05
C9orf40-201ENST00000376854 SMDT1Q9H4I9 107 aa21.62■■□□□ 1.05
C9orf40-201ENST00000376854 hCG_1809904A0A1W2PP81 198 aa21.62■■□□□ 1.05
C9orf40-201ENST00000376854 A0A1W2PR64 198 aa21.62■■□□□ 1.05
C9orf40-201ENST00000376854 A0A1W2PRV1 198 aa21.62■■□□□ 1.05
C9orf40-201ENST00000376854 ACAA1P09110 424 aaPredicted RBP21.62■■□□□ 1.05
C9orf40-201ENST00000376854 ZNF14P17017 642 aaPredicted RBP21.62■■□□□ 1.05
C9orf40-201ENST00000376854 OR5D13Q8NGL4 314 aa21.62■■□□□ 1.05
C9orf40-201ENST00000376854 A0A1W2PPE2 198 aa21.61■■□□□ 1.05
C9orf40-201ENST00000376854 RBFOX3A6NFN3 312 aa21.61■■□□□ 1.05
C9orf40-201ENST00000376854 H0Y980 276 aa21.61■■□□□ 1.05
C9orf40-201ENST00000376854 SS18L1O75177 396 aaPredicted RBP21.61■■□□□ 1.05
C9orf40-201ENST00000376854 PGLYRP1O75594 196 aaPredicted RBP21.61■■□□□ 1.05
C9orf40-201ENST00000376854 RAB1AP62820 205 aa21.61■■□□□ 1.05
C9orf40-201ENST00000376854 BAXQ07812 192 aa21.61■■□□□ 1.05
C9orf40-201ENST00000376854 SPSB3Q6PJ21 355 aa21.61■■□□□ 1.05
C9orf40-201ENST00000376854 MRPL30Q8TCC3 161 aaKnown RBP21.61■■□□□ 1.05
C9orf40-201ENST00000376854 PUS1Q9Y606 427 aaKnown RBP eCLIP21.61■■□□□ 1.05
C9orf40-201ENST00000376854 FAM166BA8MTA8 275 aa21.61■■□□□ 1.05
C9orf40-201ENST00000376854 CHST1O43916 411 aa21.61■■□□□ 1.05
C9orf40-201ENST00000376854 MMP9P14780 707 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms