RNA–Protein interactions for RNA: ENST00000356090.8

NCDN-201, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,433 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-201ENST00000356090 PPP1R3CQ9UQK1 317 aa11.51□□□□□ -0.57
NCDN-201ENST00000356090 NCOR1O75376 2440 aa11.51□□□□□ -0.57
NCDN-201ENST00000356090 A0A087WZY1 265 aa11.51□□□□□ -0.57
NCDN-201ENST00000356090 ZNF816-ZNF321PA0A0X1KG74 233 aa11.51□□□□□ -0.57
NCDN-201ENST00000356090 SLC34A2O95436 690 aa11.51□□□□□ -0.57
NCDN-201ENST00000356090 LIFP15018 202 aa11.51□□□□□ -0.57
NCDN-201ENST00000356090 CDX1P47902 265 aaPredicted RBP11.51□□□□□ -0.57
NCDN-201ENST00000356090 HLA-BQ31612 363 aa11.51□□□□□ -0.57
NCDN-201ENST00000356090 SLC23A3Q6PIS1 610 aa11.51□□□□□ -0.57
NCDN-201ENST00000356090 SSX9Q7RTT3 188 aa11.51□□□□□ -0.57
NCDN-201ENST00000356090 HPSE2Q8WWQ2 592 aa11.51□□□□□ -0.57
NCDN-201ENST00000356090 ANGPTL4Q9BY76 406 aa11.51□□□□□ -0.57
NCDN-201ENST00000356090 PRRG4Q9BZD6 226 aa11.51□□□□□ -0.57
NCDN-201ENST00000356090 LOC102725191A0A1B0GVB3 256 aa11.5□□□□□ -0.57
NCDN-201ENST00000356090 C5orf49A4QMS7 147 aa11.5□□□□□ -0.57
NCDN-201ENST00000356090 TRAPPC2LH3BP13 241 aa11.5□□□□□ -0.57
NCDN-201ENST00000356090 PHOX2AO14813 284 aa11.5□□□□□ -0.57
NCDN-201ENST00000356090 CDS2O95674 445 aa11.5□□□□□ -0.57
NCDN-201ENST00000356090 IGHV2-70P01814 119 aa11.5□□□□□ -0.57
NCDN-201ENST00000356090 CD63P08962 238 aa11.5□□□□□ -0.57
NCDN-201ENST00000356090 SRFP11831 508 aa11.5□□□□□ -0.57
NCDN-201ENST00000356090 EDN3P14138 238 aa11.5□□□□□ -0.57
NCDN-201ENST00000356090 HOXA5P20719 270 aa11.5□□□□□ -0.57
NCDN-201ENST00000356090 HLA-DRB3P79483 266 aa11.5□□□□□ -0.57
NCDN-201ENST00000356090 ELOBQ15370 118 aa11.5□□□□□ -0.57
NCDN-201ENST00000356090 HIKESHIQ53FT3 197 aa11.5□□□□□ -0.57
NCDN-201ENST00000356090 SPANXN5Q5MJ07 72 aa11.5□□□□□ -0.57
NCDN-201ENST00000356090 C10orf128Q5T292 105 aa11.5□□□□□ -0.57
NCDN-201ENST00000356090 ZIC4Q8N9L1 334 aa11.5□□□□□ -0.57
NCDN-201ENST00000356090 OR4D5Q8NGN0 318 aa11.5□□□□□ -0.57
NCDN-201ENST00000356090 RPUSD4Q96CM3 377 aaKnown RBP11.5□□□□□ -0.57
NCDN-201ENST00000356090 HS3ST6Q96QI5 342 aa11.5□□□□□ -0.57
NCDN-201ENST00000356090 CABLES2Q9BTV7 478 aa11.5□□□□□ -0.57
NCDN-201ENST00000356090 SCRT1Q9BWW7 348 aa11.5□□□□□ -0.57
NCDN-201ENST00000356090 TMEM38BQ9NVV0 291 aa11.5□□□□□ -0.57
NCDN-201ENST00000356090 HIST1H2BKO60814 126 aa11.5□□□□□ -0.57
NCDN-201ENST00000356090 PITX3O75364 302 aa11.5□□□□□ -0.57
NCDN-201ENST00000356090 CA11O75493 328 aa11.5□□□□□ -0.57
NCDN-201ENST00000356090 TMEM50AO95807 157 aa11.5□□□□□ -0.57
NCDN-201ENST00000356090 HIST1H2BJP06899 126 aa11.5□□□□□ -0.57
NCDN-201ENST00000356090 HIST1H2BOP23527 126 aa11.5□□□□□ -0.57
NCDN-201ENST00000356090 CTSSP25774 331 aa11.5□□□□□ -0.57
NCDN-201ENST00000356090 PAX6P26367 422 aa11.5□□□□□ -0.57
NCDN-201ENST00000356090 GDF1P27539 372 aa11.5□□□□□ -0.57
NCDN-201ENST00000356090 HIST1H2BBP33778 126 aa11.5□□□□□ -0.57
NCDN-201ENST00000356090 HIST1H2BDP58876 126 aa11.5□□□□□ -0.57
NCDN-201ENST00000356090 HIST1H2BCP62807 126 aa11.5□□□□□ -0.57
NCDN-201ENST00000356090 GAMTQ14353 236 aa11.5□□□□□ -0.57
NCDN-201ENST00000356090 IGFBP7Q16270 282 aa11.5□□□□□ -0.57
NCDN-201ENST00000356090 HIST2H2BEQ16778 126 aa11.5□□□□□ -0.57
NCDN-201ENST00000356090 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.5□□□□□ -0.57
NCDN-201ENST00000356090 TCEAL6Q6IPX3 200 aa11.5□□□□□ -0.57
NCDN-201ENST00000356090 SELENOHQ8IZQ5 122 aaKnown RBP11.5□□□□□ -0.57
NCDN-201ENST00000356090 C1orf87Q8N0U7 546 aa11.5□□□□□ -0.57
NCDN-201ENST00000356090 SNIP1Q8TAD8 396 aaKnown RBP11.5□□□□□ -0.57
NCDN-201ENST00000356090 HIST1H2BHQ93079 126 aa11.5□□□□□ -0.57
NCDN-201ENST00000356090 TMEM54Q969K7 222 aa11.5□□□□□ -0.57
NCDN-201ENST00000356090 HIST1H2BNQ99877 126 aa11.5□□□□□ -0.57
NCDN-201ENST00000356090 HIST1H2BMQ99879 126 aa11.5□□□□□ -0.57
NCDN-201ENST00000356090 ERRFI1Q9UJM3 462 aaPredicted RBP11.5□□□□□ -0.57
NCDN-201ENST00000356090 A0A0G2JMM0 328 aa11.5□□□□□ -0.57
NCDN-201ENST00000356090 A0A1W2PPB8 328 aa11.5□□□□□ -0.57
NCDN-201ENST00000356090 A0A1W2PRS3 328 aa11.5□□□□□ -0.57
NCDN-201ENST00000356090 KIR3DP1A8MWS1 328 aa11.5□□□□□ -0.57
NCDN-201ENST00000356090 ZIC3O60481 467 aa11.5□□□□□ -0.57
NCDN-201ENST00000356090 ICAM4Q14773 271 aa11.5□□□□□ -0.57
NCDN-201ENST00000356090 ZNF124Q15973 351 aa11.5□□□□□ -0.57
NCDN-201ENST00000356090 WDR25Q64LD2 544 aaPredicted RBP11.5□□□□□ -0.57
NCDN-201ENST00000356090 SPSB3Q6PJ21 355 aa11.5□□□□□ -0.57
NCDN-201ENST00000356090 MKXQ8IYA7 352 aa11.5□□□□□ -0.57
NCDN-201ENST00000356090 CADM4Q8NFZ8 388 aa11.5□□□□□ -0.57
NCDN-201ENST00000356090 PSMF1Q92530 271 aa11.5□□□□□ -0.57
NCDN-201ENST00000356090 ARV1Q9H2C2 271 aa11.5□□□□□ -0.57
NCDN-201ENST00000356090 ZNF576Q9H609 170 aa11.5□□□□□ -0.57
NCDN-201ENST00000356090 CALHM2Q9HA72 323 aa11.5□□□□□ -0.57
NCDN-201ENST00000356090 LYRM2Q9NU23 88 aaPredicted RBP11.5□□□□□ -0.57
NCDN-201ENST00000356090 UFSP2Q9NUQ7 469 aa11.5□□□□□ -0.57
NCDN-201ENST00000356090 IGLV3-12A0A075B6K2 115 aa11.49□□□□□ -0.57
NCDN-201ENST00000356090 CD300LBA8K4G0 201 aa11.49□□□□□ -0.57
NCDN-201ENST00000356090 ZNF732B4DXR9 585 aa11.49□□□□□ -0.57
NCDN-201ENST00000356090 SYNGR3O43761 229 aa11.49□□□□□ -0.57
NCDN-201ENST00000356090 WDR1O75083 606 aa11.49□□□□□ -0.57
NCDN-201ENST00000356090 TRGC1P0CF51 173 aa11.49□□□□□ -0.57
NCDN-201ENST00000356090 PGA5P0DJD9 388 aa11.49□□□□□ -0.57
NCDN-201ENST00000356090 CCL4P13236 92 aa11.49□□□□□ -0.57
NCDN-201ENST00000356090 NTF4P34130 210 aa11.49□□□□□ -0.57
NCDN-201ENST00000356090 BEND4Q6ZU67 534 aa11.49□□□□□ -0.57
NCDN-201ENST00000356090 MRPS17Q9Y2R5 130 aaKnown RBP11.49□□□□□ -0.57
NCDN-201ENST00000356090 DOCK10Q96BY6 2186 aa11.49□□□□□ -0.57
NCDN-201ENST00000356090 HBE1P02100 147 aa11.49□□□□□ -0.57
NCDN-201ENST00000356090 SOD3P08294 240 aa11.49□□□□□ -0.57
NCDN-201ENST00000356090 VDAC1P21796 283 aa11.49□□□□□ -0.57
NCDN-201ENST00000356090 BMP5P22003 454 aa11.49□□□□□ -0.57
NCDN-201ENST00000356090 CARFQ8N187 725 aa11.49□□□□□ -0.57
NCDN-201ENST00000356090 OR2H1Q9GZK4 316 aa11.49□□□□□ -0.57
NCDN-201ENST00000356090 SMCO3A2RU48 225 aa11.48□□□□□ -0.57
NCDN-201ENST00000356090 IDH3GP51553 393 aaPredicted RBP11.48□□□□□ -0.57
NCDN-201ENST00000356090 RAC1P63000 192 aa11.48□□□□□ -0.57
NCDN-201ENST00000356090 H3F3AP84243 136 aa11.48□□□□□ -0.57
NCDN-201ENST00000356090 KHDC3LQ587J8 217 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms