RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 C3orf85A0A1B0GTC6 90 aa5.5□□□□□ -1.53
VCAN-203ENST00000343200 HYAL3O43820 417 aaPredicted RBP5.5□□□□□ -1.53
VCAN-203ENST00000343200 TNFSF15O95150 251 aa5.5□□□□□ -1.53
VCAN-203ENST00000343200 HBZP02008 142 aa5.5□□□□□ -1.53
VCAN-203ENST00000343200 ZNF665Q9H7R5 613 aa5.5□□□□□ -1.53
VCAN-203ENST00000343200 FGF20Q9NP95 211 aaPredicted RBP5.5□□□□□ -1.53
VCAN-203ENST00000343200 OBP2AQ9NY56 170 aa5.5□□□□□ -1.53
VCAN-203ENST00000343200 TAAR3PQ9P1P4 343 aa5.5□□□□□ -1.53
VCAN-203ENST00000343200 CTDSPLO15194 276 aa5.5□□□□□ -1.53
VCAN-203ENST00000343200 PLPP2O43688 288 aa5.5□□□□□ -1.53
VCAN-203ENST00000343200 SLC2A10O95528 541 aa5.5□□□□□ -1.53
VCAN-203ENST00000343200 SEC11BP0C7V7 166 aa5.5□□□□□ -1.53
VCAN-203ENST00000343200 VEGFAP15692 232 aaPredicted RBP5.5□□□□□ -1.53
VCAN-203ENST00000343200 RPS16P62249 146 aaKnown RBP5.5□□□□□ -1.53
VCAN-203ENST00000343200 TMEM255AQ5JRV8 349 aa5.5□□□□□ -1.53
VCAN-203ENST00000343200 DLEU7Q6UYE1 221 aa5.5□□□□□ -1.53
VCAN-203ENST00000343200 LDLRAD3Q86YD5 345 aa5.5□□□□□ -1.53
VCAN-203ENST00000343200 OR52E5Q8NH55 327 aa5.5□□□□□ -1.53
VCAN-203ENST00000343200 KLHDC7BQ96G42 594 aa5.5□□□□□ -1.53
VCAN-203ENST00000343200 PDLIM5Q96HC4 596 aaKnown RBP5.5□□□□□ -1.53
VCAN-203ENST00000343200 CSF3RQ99062 836 aa5.5□□□□□ -1.53
VCAN-203ENST00000343200 OCIAD1Q9NX40 245 aa5.5□□□□□ -1.53
VCAN-203ENST00000343200 ADAMTS7Q9UKP4 1686 aa5.5□□□□□ -1.53
VCAN-203ENST00000343200 TRGV10A0A0A0MS01 117 aa5.5□□□□□ -1.53
VCAN-203ENST00000343200 LINC00587B1AMM8 73 aa5.5□□□□□ -1.53
VCAN-203ENST00000343200 H0Y980 276 aa5.5□□□□□ -1.53
VCAN-203ENST00000343200 KBTBD11O94819 623 aa5.5□□□□□ -1.53
VCAN-203ENST00000343200 CD74P04233 296 aa5.5□□□□□ -1.53
VCAN-203ENST00000343200 RPL27P61353 136 aaKnown RBP5.5□□□□□ -1.53
VCAN-203ENST00000343200 MED25Q71SY5 747 aa5.5□□□□□ -1.53
VCAN-203ENST00000343200 TCF24Q7RTU0 167 aa5.5□□□□□ -1.53
VCAN-203ENST00000343200 C20orf196Q8IYI0 205 aa5.5□□□□□ -1.53
VCAN-203ENST00000343200 LRRC75AQ8NAA5 344 aa5.5□□□□□ -1.53
VCAN-203ENST00000343200 MRPS24Q96EL2 167 aaKnown RBP5.5□□□□□ -1.53
VCAN-203ENST00000343200 TXNRD2Q9NNW7 524 aa5.5□□□□□ -1.53
VCAN-203ENST00000343200 CLDND1Q9NY35 253 aa5.5□□□□□ -1.53
VCAN-203ENST00000343200 DUSP13Q9UII6 198 aa5.5□□□□□ -1.53
VCAN-203ENST00000343200 SEMG1P04279 462 aa5.49□□□□□ -1.53
VCAN-203ENST00000343200 PMELP40967 661 aa5.49□□□□□ -1.53
VCAN-203ENST00000343200 PGGT1BP53609 377 aa5.49□□□□□ -1.53
VCAN-203ENST00000343200 PRSS8Q16651 343 aa5.49□□□□□ -1.53
VCAN-203ENST00000343200 GAGE13Q4V321 117 aa5.49□□□□□ -1.53
VCAN-203ENST00000343200 OSR2Q8N2R0 312 aa5.49□□□□□ -1.53
VCAN-203ENST00000343200 DOK4Q8TEW6 326 aa5.49□□□□□ -1.53
VCAN-203ENST00000343200 SLC25A43Q8WUT9 341 aaPredicted RBP5.49□□□□□ -1.53
VCAN-203ENST00000343200 RAB1CQ92928 201 aa5.49□□□□□ -1.53
VCAN-203ENST00000343200 NRIP2Q9BQI9 281 aa5.49□□□□□ -1.53
VCAN-203ENST00000343200 PCGF1Q9BSM1 259 aa5.49□□□□□ -1.53
VCAN-203ENST00000343200 RARRES3Q9UL19 164 aa5.49□□□□□ -1.53
VCAN-203ENST00000343200 M0R135 149 aa5.49□□□□□ -1.53
VCAN-203ENST00000343200 HOXB2P14652 356 aa5.49□□□□□ -1.53
VCAN-203ENST00000343200 KIR3DL2P43630 455 aa5.49□□□□□ -1.53
VCAN-203ENST00000343200 CFAP161Q6P656 301 aa5.49□□□□□ -1.53
VCAN-203ENST00000343200 RGP1Q92546 391 aaPredicted RBP5.49□□□□□ -1.53
VCAN-203ENST00000343200 ZNF799Q96GE5 643 aa5.49□□□□□ -1.53
VCAN-203ENST00000343200 MRIQ9BWK5 157 aa5.49□□□□□ -1.53
VCAN-203ENST00000343200 SMOC1Q9H4F8 434 aa5.49□□□□□ -1.53
VCAN-203ENST00000343200 EDA2RQ9HAV5 297 aa5.49□□□□□ -1.53
VCAN-203ENST00000343200 SEPSECSQ9HD40 501 aaKnown RBP5.49□□□□□ -1.53
VCAN-203ENST00000343200 GDE1Q9NZC3 331 aa5.49□□□□□ -1.53
VCAN-203ENST00000343200 ANKHD1Q8IWZ3 2542 aaKnown RBP5.49□□□□□ -1.53
VCAN-203ENST00000343200 A0A1W2PRU2 124 aa5.49□□□□□ -1.53
VCAN-203ENST00000343200 IGLON5A6NGN9 336 aa5.49□□□□□ -1.53
VCAN-203ENST00000343200 UBE2CO00762 179 aa5.49□□□□□ -1.53
VCAN-203ENST00000343200 B4GALT3O60512 393 aa5.49□□□□□ -1.53
VCAN-203ENST00000343200 HOXA10P31260 410 aaPredicted RBP5.49□□□□□ -1.53
VCAN-203ENST00000343200 APOBEC1P41238 236 aaKnown RBP5.49□□□□□ -1.53
VCAN-203ENST00000343200 EVX2Q03828 476 aa5.49□□□□□ -1.53
VCAN-203ENST00000343200 C1orf140Q5VVS0 124 aa5.49□□□□□ -1.53
VCAN-203ENST00000343200 CLEC14AQ86T13 490 aa5.49□□□□□ -1.53
VCAN-203ENST00000343200 RAB1BQ9H0U4 201 aa5.49□□□□□ -1.53
VCAN-203ENST00000343200 KCND3Q9UK17 655 aa5.49□□□□□ -1.53
VCAN-203ENST00000343200 TMX2-CTNND1H3BSU7 103 aa5.49□□□□□ -1.53
VCAN-203ENST00000343200 P2RY4P51582 365 aa5.49□□□□□ -1.53
VCAN-203ENST00000343200 FZD5Q13467 585 aa5.49□□□□□ -1.53
VCAN-203ENST00000343200 Q6ZVL8 140 aa5.49□□□□□ -1.53
VCAN-203ENST00000343200 ATOH7Q8N100 152 aa5.49□□□□□ -1.53
VCAN-203ENST00000343200 SCCPDHQ8NBX0 429 aa5.49□□□□□ -1.53
VCAN-203ENST00000343200 C2orf88Q9BSF0 95 aa5.49□□□□□ -1.53
VCAN-203ENST00000343200 SFXN1Q9H9B4 322 aa5.49□□□□□ -1.53
VCAN-203ENST00000343200 THYN1Q9P016 225 aa5.49□□□□□ -1.53
VCAN-203ENST00000343200 A0A1B0GWA3 101 aa5.49□□□□□ -1.53
VCAN-203ENST00000343200 MARCH11A6NNE9 402 aa5.49□□□□□ -1.53
VCAN-203ENST00000343200 SFT2D2O95562 160 aa5.49□□□□□ -1.53
VCAN-203ENST00000343200 GPR75O95800 540 aa5.49□□□□□ -1.53
VCAN-203ENST00000343200 PRSS2P07478 247 aa5.49□□□□□ -1.53
VCAN-203ENST00000343200 CYBAP13498 195 aa5.49□□□□□ -1.53
VCAN-203ENST00000343200 AGAP20933 346 aa5.49□□□□□ -1.53
VCAN-203ENST00000343200 RPS23P62266 143 aaKnown RBP5.49□□□□□ -1.53
VCAN-203ENST00000343200 CCSMST1Q4G0I0 132 aa5.49□□□□□ -1.53
VCAN-203ENST00000343200 ZNF324BQ6AW86 544 aaPredicted RBP5.49□□□□□ -1.53
VCAN-203ENST00000343200 FIGLAQ6QHK4 219 aa5.49□□□□□ -1.53
VCAN-203ENST00000343200 MISP3Q96FF7 219 aa5.49□□□□□ -1.53
VCAN-203ENST00000343200 A0A1B0GU03 582 aa5.49□□□□□ -1.53
VCAN-203ENST00000343200 PGPEP1LA6NFU8 196 aa5.49□□□□□ -1.53
VCAN-203ENST00000343200 RBP4P02753 201 aa5.49□□□□□ -1.53
VCAN-203ENST00000343200 CTSDP07339 412 aaPredicted RBP5.49□□□□□ -1.53
VCAN-203ENST00000343200 CD22P20273 847 aa5.49□□□□□ -1.53
VCAN-203ENST00000343200 ATP6V0CP27449 155 aa5.49□□□□□ -1.53
VCAN-203ENST00000343200 ADRA1AP35348 466 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms