RNA–Protein interactions for RNA: ENST00000330334.7

HDDC3-201, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-201ENST00000330334 IGFBP3P17936 291 aaPredicted RBP14.18□□□□□ -0.14
HDDC3-201ENST00000330334 GZMHP20718 246 aa14.18□□□□□ -0.14
HDDC3-201ENST00000330334 OR3A4PP47883 348 aa14.18□□□□□ -0.14
HDDC3-201ENST00000330334 YIF1BQ5BJH7 314 aa14.18□□□□□ -0.14
HDDC3-201ENST00000330334 ARSJQ5FYB0 599 aaPredicted RBP14.18□□□□□ -0.14
HDDC3-201ENST00000330334 SAMD5Q5TGI4 173 aa14.18□□□□□ -0.14
HDDC3-201ENST00000330334 OSR2Q8N2R0 312 aa14.18□□□□□ -0.14
HDDC3-201ENST00000330334 DHRSXQ8N5I4 330 aa14.18□□□□□ -0.14
HDDC3-201ENST00000330334 OR10K1Q8NGX5 313 aa14.18□□□□□ -0.14
HDDC3-201ENST00000330334 CAPSLQ8WWF8 208 aa14.18□□□□□ -0.14
HDDC3-201ENST00000330334 CYGBQ8WWM9 190 aa14.18□□□□□ -0.14
HDDC3-201ENST00000330334 CITED2Q99967 270 aaPredicted RBP14.18□□□□□ -0.14
HDDC3-201ENST00000330334 DPCDQ9BVM2 203 aaPredicted RBP14.18□□□□□ -0.14
HDDC3-201ENST00000330334 FAM192AQ9GZU8 254 aa14.18□□□□□ -0.14
HDDC3-201ENST00000330334 IDI2-AS1Q9NZ38 188 aa14.18□□□□□ -0.14
HDDC3-201ENST00000330334 ST3GAL6Q9Y274 331 aa14.18□□□□□ -0.14
HDDC3-201ENST00000330334 FAM172BPA6NC97 362 aa14.17□□□□□ -0.14
HDDC3-201ENST00000330334 J3QR06 171 aa14.17□□□□□ -0.14
HDDC3-201ENST00000330334 CDRT1O95170 752 aa14.17□□□□□ -0.14
HDDC3-201ENST00000330334 LALBAP00709 142 aa14.17□□□□□ -0.14
HDDC3-201ENST00000330334 CSTBP04080 98 aaKnown RBP14.17□□□□□ -0.14
HDDC3-201ENST00000330334 FAM106CPP0CH98 169 aa14.17□□□□□ -0.14
HDDC3-201ENST00000330334 CD24P25063 80 aa14.17□□□□□ -0.14
HDDC3-201ENST00000330334 NFYBP25208 207 aa14.17□□□□□ -0.14
HDDC3-201ENST00000330334 GLP1RP43220 463 aa14.17□□□□□ -0.14
HDDC3-201ENST00000330334 RBM11P57052 281 aaKnown RBP14.17□□□□□ -0.14
HDDC3-201ENST00000330334 RPS11P62280 158 aaKnown RBP eCLIP14.17□□□□□ -0.14
HDDC3-201ENST00000330334 CD83Q01151 205 aa14.17□□□□□ -0.14
HDDC3-201ENST00000330334 RIPK1Q13546 671 aa14.17□□□□□ -0.14
HDDC3-201ENST00000330334 LRRC36Q1X8D7 754 aa14.17□□□□□ -0.14
HDDC3-201ENST00000330334 MPV17LQ2QL34 196 aa14.17□□□□□ -0.14
HDDC3-201ENST00000330334 BEAN1Q3B7T3 259 aa14.17□□□□□ -0.14
HDDC3-201ENST00000330334 Q499Y3 187 aa14.17□□□□□ -0.14
HDDC3-201ENST00000330334 DDI2Q5TDH0 399 aa14.17□□□□□ -0.14
HDDC3-201ENST00000330334 HIST2H2BDQ6DRA6 164 aa14.17□□□□□ -0.14
HDDC3-201ENST00000330334 C1QL4Q86Z23 238 aa14.17□□□□□ -0.14
HDDC3-201ENST00000330334 CDH26Q8IXH8 852 aa14.17□□□□□ -0.14
HDDC3-201ENST00000330334 SUMF2Q8NBJ7 301 aa14.17□□□□□ -0.14
HDDC3-201ENST00000330334 GGHQ92820 318 aa14.17□□□□□ -0.14
HDDC3-201ENST00000330334 OR5M11Q96RB7 305 aa14.17□□□□□ -0.14
HDDC3-201ENST00000330334 S100A13Q99584 98 aa14.17□□□□□ -0.14
HDDC3-201ENST00000330334 SLC25A33Q9BSK2 321 aa14.17□□□□□ -0.14
HDDC3-201ENST00000330334 CKLFQ9UBR5 152 aa14.17□□□□□ -0.14
HDDC3-201ENST00000330334 ING4Q9UNL4 249 aa14.17□□□□□ -0.14
HDDC3-201ENST00000330334 EFCAB10A6NFE3 127 aa14.16□□□□□ -0.14
HDDC3-201ENST00000330334 AMY1AP04745 511 aa14.16□□□□□ -0.14
HDDC3-201ENST00000330334 AMY2AP04746 511 aa14.16□□□□□ -0.14
HDDC3-201ENST00000330334 TAS2R43P59537 309 aa14.16□□□□□ -0.14
HDDC3-201ENST00000330334 ST3GAL4Q11206 333 aa14.16□□□□□ -0.14
HDDC3-201ENST00000330334 GPR176Q14439 515 aa14.16□□□□□ -0.14
HDDC3-201ENST00000330334 NSUN5P1Q3KNT7 163 aa14.16□□□□□ -0.14
HDDC3-201ENST00000330334 UTF1Q5T230 341 aa14.16□□□□□ -0.14
HDDC3-201ENST00000330334 OR5AU1Q8NGC0 362 aa14.16□□□□□ -0.14
HDDC3-201ENST00000330334 PLPPR1Q8TBJ4 325 aa14.16□□□□□ -0.14
HDDC3-201ENST00000330334 RPEQ96AT9 228 aa14.16□□□□□ -0.14
HDDC3-201ENST00000330334 MRPS24Q96EL2 167 aaKnown RBP14.16□□□□□ -0.14
HDDC3-201ENST00000330334 PGLYRP3Q96LB9 341 aa14.16□□□□□ -0.14
HDDC3-201ENST00000330334 CNOT2Q9NZN8 540 aaKnown RBP14.16□□□□□ -0.14
HDDC3-201ENST00000330334 PSG11Q9UQ72 335 aa14.16□□□□□ -0.14
HDDC3-201ENST00000330334 G3V4G9 280 aa14.15□□□□□ -0.14
HDDC3-201ENST00000330334 OR7C1O76099 320 aaPredicted RBP14.15□□□□□ -0.14
HDDC3-201ENST00000330334 CD1AP06126 327 aa14.15□□□□□ -0.14
HDDC3-201ENST00000330334 GTF2F2P13984 249 aa14.15□□□□□ -0.14
HDDC3-201ENST00000330334 FSTP19883 344 aa14.15□□□□□ -0.14
HDDC3-201ENST00000330334 MADCAM1Q13477 382 aa14.15□□□□□ -0.14
HDDC3-201ENST00000330334 RBM39Q14498 530 aaKnown RBP14.15□□□□□ -0.14
HDDC3-201ENST00000330334 ABCA11PQ4W5N1 156 aa14.15□□□□□ -0.14
HDDC3-201ENST00000330334 CENPVQ7Z7K6 275 aaPredicted RBP14.15□□□□□ -0.14
HDDC3-201ENST00000330334 LYG1Q8N1E2 194 aa14.15□□□□□ -0.14
HDDC3-201ENST00000330334 OR52M1Q8NGK5 317 aa14.15□□□□□ -0.14
HDDC3-201ENST00000330334 MRGPRDQ8TDS7 321 aa14.15□□□□□ -0.14
HDDC3-201ENST00000330334 R3HDM4Q96D70 268 aa14.15□□□□□ -0.14
HDDC3-201ENST00000330334 ZNF184Q99676 751 aaPredicted RBP14.15□□□□□ -0.14
HDDC3-201ENST00000330334 PLCXD1Q9NUJ7 323 aa14.15□□□□□ -0.14
HDDC3-201ENST00000330334 PLXNB1O43157 2135 aa14.15□□□□□ -0.14
HDDC3-201ENST00000330334 TRBV5-7A0A0A0MS05 114 aa14.14□□□□□ -0.15
HDDC3-201ENST00000330334 TMEM30CPA0ZSE6 113 aa14.14□□□□□ -0.15
HDDC3-201ENST00000330334 GEMIN2O14893 280 aaKnown RBP14.14□□□□□ -0.15
HDDC3-201ENST00000330334 RAB7AP51149 207 aa14.14□□□□□ -0.15
HDDC3-201ENST00000330334 TMEM95Q3KNT9 176 aa14.14□□□□□ -0.15
HDDC3-201ENST00000330334 OR8H3Q8N146 312 aa14.14□□□□□ -0.15
HDDC3-201ENST00000330334 C8orf31Q8N9H6 132 aa14.14□□□□□ -0.15
HDDC3-201ENST00000330334 WFDC9Q8NEX5 89 aa14.14□□□□□ -0.15
HDDC3-201ENST00000330334 OR13C5Q8NGS8 318 aa14.14□□□□□ -0.15
HDDC3-201ENST00000330334 RFESDQ8TAC1 157 aa14.14□□□□□ -0.15
HDDC3-201ENST00000330334 FBLIM1Q8WUP2 373 aa14.14□□□□□ -0.15
HDDC3-201ENST00000330334 TOMM40LQ969M1 308 aa14.14□□□□□ -0.15
HDDC3-201ENST00000330334 SPACA1Q9HBV2 294 aa14.14□□□□□ -0.15
HDDC3-201ENST00000330334 PSORS1C1Q9UIG5 152 aa14.14□□□□□ -0.15
HDDC3-201ENST00000330334 LPLP06858 475 aa14.13□□□□□ -0.15
HDDC3-201ENST00000330334 SSTR5P35346 364 aa14.13□□□□□ -0.15
HDDC3-201ENST00000330334 CAPGP40121 348 aa14.13□□□□□ -0.15
HDDC3-201ENST00000330334 RCN1Q15293 331 aa14.13□□□□□ -0.15
HDDC3-201ENST00000330334 FBLN7Q53RD9 439 aa14.13□□□□□ -0.15
HDDC3-201ENST00000330334 REC114Q7Z4M0 266 aa14.13□□□□□ -0.15
HDDC3-201ENST00000330334 C8orf59Q8N0T1 100 aaPredicted RBP14.13□□□□□ -0.15
HDDC3-201ENST00000330334 ORAI1Q96D31 301 aa14.13□□□□□ -0.15
HDDC3-201ENST00000330334 ZNF581Q9P0T4 197 aa14.13□□□□□ -0.15
HDDC3-201ENST00000330334 TRAV8-7A0A075B6U6 113 aa14.12□□□□□ -0.15
HDDC3-201ENST00000330334 A0A1W2PPI3 338 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms