RNA–Protein interactions for RNA: ENST00000272793.9

UBR3-201, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBR3, Length 8,005 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-201ENST00000272793 ZNF688P0C7X2 276 aa14.05□□□□□ -0.16
UBR3-201ENST00000272793 FAM74A3Q4VXF1 159 aa14.05□□□□□ -0.16
UBR3-201ENST00000272793 NKAIN4Q8IVV8 208 aa14.05□□□□□ -0.16
UBR3-201ENST00000272793 TMEM229BQ8NBD8 167 aa14.05□□□□□ -0.16
UBR3-201ENST00000272793 OR8D4Q8NGM9 314 aa14.05□□□□□ -0.16
UBR3-201ENST00000272793 FABP5Q01469 135 aa14.05□□□□□ -0.16
UBR3-201ENST00000272793 DLEU7Q6UYE1 221 aa14.05□□□□□ -0.16
UBR3-201ENST00000272793 FDCSPQ8NFU4 85 aa14.05□□□□□ -0.16
UBR3-201ENST00000272793 TNFRSF14Q92956 283 aa14.05□□□□□ -0.16
UBR3-201ENST00000272793 DXOO77932 396 aaKnown RBP14.05□□□□□ -0.16
UBR3-201ENST00000272793 MC5RP33032 325 aa14.05□□□□□ -0.16
UBR3-201ENST00000272793 PNLIPRP3Q17RR3 467 aa14.05□□□□□ -0.16
UBR3-201ENST00000272793 FUNDC1Q8IVP5 155 aa14.05□□□□□ -0.16
UBR3-201ENST00000272793 ATOH8Q96SQ7 321 aa14.05□□□□□ -0.16
UBR3-201ENST00000272793 IFITM5A6NNB3 132 aa14.05□□□□□ -0.16
UBR3-201ENST00000272793 TCEAL1Q15170 157 aa14.05□□□□□ -0.16
UBR3-201ENST00000272793 FAM89BQ8N5H3 189 aa14.05□□□□□ -0.16
UBR3-201ENST00000272793 SPICQ8N5J4 248 aa14.05□□□□□ -0.16
UBR3-201ENST00000272793 PGLYRP4Q96LB8 373 aa14.05□□□□□ -0.16
UBR3-201ENST00000272793 UBR2Q8IWV8 1755 aa14.05□□□□□ -0.16
UBR3-201ENST00000272793 TUBGCP6Q96RT7 1819 aa14.05□□□□□ -0.16
UBR3-201ENST00000272793 IGKV6D-41A0A0C4DH26 115 aa14.04□□□□□ -0.16
UBR3-201ENST00000272793 AWAT1Q58HT5 328 aa14.04□□□□□ -0.16
UBR3-201ENST00000272793 TMEM78Q5T7P6 136 aa14.04□□□□□ -0.16
UBR3-201ENST00000272793 VAX2Q9UIW0 290 aa14.04□□□□□ -0.16
UBR3-201ENST00000272793 SHANK1Q9Y566 2161 aa14.04□□□□□ -0.16
UBR3-201ENST00000272793 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.04□□□□□ -0.16
UBR3-201ENST00000272793 TMEM189A5PLL7 270 aa14.04□□□□□ -0.16
UBR3-201ENST00000272793 TMEM189-UBE2V1I3L0A0 370 aa14.04□□□□□ -0.16
UBR3-201ENST00000272793 MMP9P14780 707 aa14.04□□□□□ -0.16
UBR3-201ENST00000272793 ZC3H3Q8IXZ2 948 aaKnown RBP14.04□□□□□ -0.16
UBR3-201ENST00000272793 SAP30LQ9HAJ7 183 aa14.04□□□□□ -0.16
UBR3-201ENST00000272793 STAC2Q6ZMT1 411 aa14.04□□□□□ -0.16
UBR3-201ENST00000272793 DERL1Q9BUN8 251 aa14.04□□□□□ -0.16
UBR3-201ENST00000272793 ZNF770Q6IQ21 691 aaPredicted RBP14.04□□□□□ -0.16
UBR3-201ENST00000272793 C6orf106Q9H6K1 298 aaPredicted RBP14.04□□□□□ -0.16
UBR3-201ENST00000272793 MKRN2OSH3BPM6 223 aa14.04□□□□□ -0.16
UBR3-201ENST00000272793 APOMO95445 188 aa14.04□□□□□ -0.16
UBR3-201ENST00000272793 GNG3P63215 75 aa14.04□□□□□ -0.16
UBR3-201ENST00000272793 OXGR1Q96P68 337 aa14.04□□□□□ -0.16
UBR3-201ENST00000272793 FOXJ2Q9P0K8 574 aa14.04□□□□□ -0.16
UBR3-201ENST00000272793 SRSF6Q13247 344 aaKnown RBP14.04□□□□□ -0.16
UBR3-201ENST00000272793 KIR3DL3Q8N743 410 aa14.04□□□□□ -0.16
UBR3-201ENST00000272793 VCX2Q9H322 139 aa14.04□□□□□ -0.16
UBR3-201ENST00000272793 TUBA4BQ9H853 241 aa14.04□□□□□ -0.16
UBR3-201ENST00000272793 RPS19BP1Q86WX3 136 aaKnown RBP14.04□□□□□ -0.16
UBR3-201ENST00000272793 FAM174AQ8TBP5 190 aa14.04□□□□□ -0.16
UBR3-201ENST00000272793 TLCD2A6NGC4 264 aa14.03□□□□□ -0.16
UBR3-201ENST00000272793 CA13Q8N1Q1 262 aa14.03□□□□□ -0.16
UBR3-201ENST00000272793 LNP1A1A4G5 178 aa14.03□□□□□ -0.16
UBR3-201ENST00000272793 Q8IYB0 196 aa14.03□□□□□ -0.16
UBR3-201ENST00000272793 ZNF740Q8NDX6 193 aa14.03□□□□□ -0.16
UBR3-201ENST00000272793 R3HDM4Q96D70 268 aa14.03□□□□□ -0.16
UBR3-201ENST00000272793 MRPL20Q9BYC9 149 aaKnown RBP14.03□□□□□ -0.16
UBR3-201ENST00000272793 AICDAQ9GZX7 198 aa14.03□□□□□ -0.16
UBR3-201ENST00000272793 FRRS1LQ9P0K9 344 aa14.03□□□□□ -0.16
UBR3-201ENST00000272793 UQCR10Q9UDW1 63 aa14.03□□□□□ -0.16
UBR3-201ENST00000272793 MED1Q15648 1581 aaPredicted RBP14.03□□□□□ -0.16
UBR3-201ENST00000272793 TDGF1P13385 188 aa14.03□□□□□ -0.16
UBR3-201ENST00000272793 CNTFRP26992 372 aa14.03□□□□□ -0.16
UBR3-201ENST00000272793 FAM27D1Q5T7N8 215 aa14.03□□□□□ -0.16
UBR3-201ENST00000272793 MBNL2Q5VZF2 373 aaKnown RBP14.03□□□□□ -0.16
UBR3-201ENST00000272793 ZNF296Q8WUU4 475 aaPredicted RBP14.03□□□□□ -0.16
UBR3-201ENST00000272793 NUBP1P53384 320 aa14.03□□□□□ -0.16
UBR3-201ENST00000272793 FBXO46Q6PJ61 603 aaPredicted RBP14.03□□□□□ -0.16
UBR3-201ENST00000272793 CLEC18BQ6UXF7 455 aa14.03□□□□□ -0.16
UBR3-201ENST00000272793 SARAFQ96BY9 339 aa14.03□□□□□ -0.16
UBR3-201ENST00000272793 SLC26A1Q9H2B4 701 aa14.03□□□□□ -0.16
UBR3-201ENST00000272793 LPAR2Q9HBW0 351 aa14.03□□□□□ -0.16
UBR3-201ENST00000272793 TREX1Q9NSU2 369 aa14.03□□□□□ -0.16
UBR3-201ENST00000272793 TUBD1Q9UJT1 453 aa14.03□□□□□ -0.16
UBR3-201ENST00000272793 SLC16A11Q8NCK7 471 aa14.03□□□□□ -0.16
UBR3-201ENST00000272793 ABHD14BQ96IU4 210 aa14.03□□□□□ -0.16
UBR3-201ENST00000272793 ZNF117Q03924 483 aa14.02□□□□□ -0.16
UBR3-201ENST00000272793 IQCF3P0C7M6 154 aa14.02□□□□□ -0.16
UBR3-201ENST00000272793 OR4D5Q8NGN0 318 aa14.02□□□□□ -0.16
UBR3-201ENST00000272793 OR10D3Q8NH80 312 aa14.02□□□□□ -0.16
UBR3-201ENST00000272793 C9orf170A2RU37 121 aa14.02□□□□□ -0.16
UBR3-201ENST00000272793 PRSS37A4D1T9 235 aa14.02□□□□□ -0.16
UBR3-201ENST00000272793 FCRL6Q6DN72 434 aa14.02□□□□□ -0.16
UBR3-201ENST00000272793 IL23AQ9NPF7 189 aa14.02□□□□□ -0.16
UBR3-201ENST00000272793 SIRT7Q9NRC8 400 aa14.02□□□□□ -0.16
UBR3-201ENST00000272793 LEPROTL1O95214 131 aa14.02□□□□□ -0.17
UBR3-201ENST00000272793 SNRPCP09234 159 aaKnown RBP14.02□□□□□ -0.17
UBR3-201ENST00000272793 LRRC75BQ2VPJ9 315 aa14.02□□□□□ -0.17
UBR3-201ENST00000272793 ZNF600Q6ZNG1 722 aa14.02□□□□□ -0.17
UBR3-201ENST00000272793 PPM1DO15297 605 aa14.02□□□□□ -0.17
UBR3-201ENST00000272793 CCR5P51681 352 aa14.02□□□□□ -0.17
UBR3-201ENST00000272793 OR4B1Q8NGF8 309 aa14.02□□□□□ -0.17
UBR3-201ENST00000272793 RNASEH2CQ8TDP1 164 aaKnown RBP14.02□□□□□ -0.17
UBR3-201ENST00000272793 INSM2Q96T92 566 aaPredicted RBP14.02□□□□□ -0.17
UBR3-201ENST00000272793 SOSTQ9BQB4 213 aa14.02□□□□□ -0.17
UBR3-201ENST00000272793 KLK10O43240 276 aa14.01□□□□□ -0.17
UBR3-201ENST00000272793 RAC3P60763 192 aa14.01□□□□□ -0.17
UBR3-201ENST00000272793 PLPPR5Q32ZL2 321 aa14.01□□□□□ -0.17
UBR3-201ENST00000272793 FAM74A7A6NL05 159 aa14.01□□□□□ -0.17
UBR3-201ENST00000272793 ELAVL1Q15717 326 aaKnown RBP14.01□□□□□ -0.17
UBR3-201ENST00000272793 DUSP5Q16690 384 aa14.01□□□□□ -0.17
UBR3-201ENST00000272793 ZNF385CQ66K41 422 aaPredicted RBP14.01□□□□□ -0.17
UBR3-201ENST00000272793 PELI3Q8N2H9 469 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 167 ms