RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 NKAPLQ5M9Q1 402 aa11.62□□□□□ -0.55
VPS25-201ENST00000253794 BRICD5Q6PL45 260 aa11.62□□□□□ -0.55
VPS25-201ENST00000253794 METAP1DQ6UB28 335 aaPredicted RBP11.62□□□□□ -0.55
VPS25-201ENST00000253794 BTNL3Q6UXE8 466 aa11.62□□□□□ -0.55
VPS25-201ENST00000253794 ZNF554Q86TJ5 538 aa11.62□□□□□ -0.55
VPS25-201ENST00000253794 S100A16Q96FQ6 103 aaKnown RBP11.62□□□□□ -0.55
VPS25-201ENST00000253794 FAAP24Q9BTP7 215 aa11.62□□□□□ -0.55
VPS25-201ENST00000253794 RIMS4Q9H426 269 aaPredicted RBP11.62□□□□□ -0.55
VPS25-201ENST00000253794 UNKLQ9H9P5 680 aaKnown RBP11.62□□□□□ -0.55
VPS25-201ENST00000253794 TAS2R3Q9NYW6 316 aa11.62□□□□□ -0.55
VPS25-201ENST00000253794 KIF25Q9UIL4 384 aa11.62□□□□□ -0.55
VPS25-201ENST00000253794 ANK3Q12955 4377 aaKnown RBP11.61□□□□□ -0.55
VPS25-201ENST00000253794 LY6G6DO95868 133 aa11.61□□□□□ -0.55
VPS25-201ENST00000253794 EIF4EP06730 217 aaKnown RBP11.61□□□□□ -0.55
VPS25-201ENST00000253794 MELTFP08582 738 aa11.61□□□□□ -0.55
VPS25-201ENST00000253794 MMP9P14780 707 aa11.61□□□□□ -0.55
VPS25-201ENST00000253794 CDK2P24941 298 aa11.61□□□□□ -0.55
VPS25-201ENST00000253794 MNDAP41218 407 aa11.61□□□□□ -0.55
VPS25-201ENST00000253794 ZNF273Q14593 569 aa11.61□□□□□ -0.55
VPS25-201ENST00000253794 ZNF260Q3ZCT1 412 aa11.61□□□□□ -0.55
VPS25-201ENST00000253794 DCAF12L2Q5VW00 463 aa11.61□□□□□ -0.55
VPS25-201ENST00000253794 ZNF880Q6PDB4 577 aa11.61□□□□□ -0.55
VPS25-201ENST00000253794 RTN4RL2Q86UN3 420 aa11.61□□□□□ -0.55
VPS25-201ENST00000253794 C11orf42Q8N5U0 333 aa11.61□□□□□ -0.55
VPS25-201ENST00000253794 TPRX1Q8N7U7 411 aa11.61□□□□□ -0.55
VPS25-201ENST00000253794 OR4M1Q8NGD0 313 aa11.61□□□□□ -0.55
VPS25-201ENST00000253794 MRPL30Q8TCC3 161 aaKnown RBP11.61□□□□□ -0.55
VPS25-201ENST00000253794 NEK7Q8TDX7 302 aa11.61□□□□□ -0.55
VPS25-201ENST00000253794 DYRK2Q92630 601 aa11.61□□□□□ -0.55
VPS25-201ENST00000253794 CYYR1Q96J86 154 aa11.61□□□□□ -0.55
VPS25-201ENST00000253794 TMPRSS13Q9BYE2 586 aa11.61□□□□□ -0.55
VPS25-201ENST00000253794 SIRPDQ9H106 197 aa11.61□□□□□ -0.55
VPS25-201ENST00000253794 MIXL1Q9H2W2 232 aa11.61□□□□□ -0.55
VPS25-201ENST00000253794 MMP27Q9H306 513 aa11.61□□□□□ -0.55
VPS25-201ENST00000253794 DIABLOQ9NR28 239 aa11.61□□□□□ -0.55
VPS25-201ENST00000253794 MBNL3Q9NUK0 354 aaKnown RBP11.61□□□□□ -0.55
VPS25-201ENST00000253794 OPN4Q9UHM6 478 aa11.61□□□□□ -0.55
VPS25-201ENST00000253794 DSCAML1Q8TD84 2053 aa11.6□□□□□ -0.55
VPS25-201ENST00000253794 MEIKINA0A087WXM9 373 aa11.6□□□□□ -0.55
VPS25-201ENST00000253794 TRGV10A0A0A0MS01 117 aa11.6□□□□□ -0.55
VPS25-201ENST00000253794 A0A1W2PQ09 198 aa11.6□□□□□ -0.55
VPS25-201ENST00000253794 UBE2QL1A1L167 161 aa11.6□□□□□ -0.55
VPS25-201ENST00000253794 C17orf98A8MV24 154 aa11.6□□□□□ -0.55
VPS25-201ENST00000253794 HPGDSO60760 199 aa11.6□□□□□ -0.55
VPS25-201ENST00000253794 ZNF728P0DKX0 622 aa11.6□□□□□ -0.55
VPS25-201ENST00000253794 ELK1P19419 428 aa11.6□□□□□ -0.55
VPS25-201ENST00000253794 PNLIPRP3Q17RR3 467 aa11.6□□□□□ -0.55
VPS25-201ENST00000253794 CDNFQ49AH0 187 aa11.6□□□□□ -0.55
VPS25-201ENST00000253794 HACD4Q5VWC8 232 aa11.6□□□□□ -0.55
VPS25-201ENST00000253794 FAM185AQ8N0U4 392 aa11.6□□□□□ -0.55
VPS25-201ENST00000253794 Q8N7P7 452 aa11.6□□□□□ -0.55
VPS25-201ENST00000253794 OR13A1Q8NGR1 328 aa11.6□□□□□ -0.55
VPS25-201ENST00000253794 MCFD2Q8NI22 146 aa11.6□□□□□ -0.55
VPS25-201ENST00000253794 PHF21AQ96BD5 680 aa11.6□□□□□ -0.55
VPS25-201ENST00000253794 ZNF714Q96N38 554 aa11.6□□□□□ -0.55
VPS25-201ENST00000253794 WDFY2Q96P53 400 aa11.6□□□□□ -0.55
VPS25-201ENST00000253794 DCUN1D5Q9BTE7 237 aa11.6□□□□□ -0.55
VPS25-201ENST00000253794 C12orf4Q9NQ89 552 aa11.6□□□□□ -0.55
VPS25-201ENST00000253794 AK3Q9UIJ7 227 aa11.6□□□□□ -0.55
VPS25-201ENST00000253794 KCNS2Q9ULS6 477 aa11.6□□□□□ -0.55
VPS25-201ENST00000253794 NSD1Q96L73 2696 aaPredicted RBP11.6□□□□□ -0.55
VPS25-201ENST00000253794 ZNF729A6NN14 1252 aaPredicted RBP11.59□□□□□ -0.55
VPS25-201ENST00000253794 NPIPB11E5RHQ5 1161 aa11.59□□□□□ -0.55
VPS25-201ENST00000253794 CTDSP2O14595 271 aa11.59□□□□□ -0.55
VPS25-201ENST00000253794 ORC5O43913 435 aa11.59□□□□□ -0.55
VPS25-201ENST00000253794 GNB3P16520 340 aa11.59□□□□□ -0.55
VPS25-201ENST00000253794 GZMHP20718 246 aa11.59□□□□□ -0.55
VPS25-201ENST00000253794 SRSF7Q16629 238 aaKnown RBP eCLIP11.59□□□□□ -0.55
VPS25-201ENST00000253794 TRAT1Q6PIZ9 186 aa11.59□□□□□ -0.55
VPS25-201ENST00000253794 Q6ZPA2 131 aa11.59□□□□□ -0.55
VPS25-201ENST00000253794 MOB1BQ7L9L4 216 aa11.59□□□□□ -0.55
VPS25-201ENST00000253794 ZNF565Q8N9K5 539 aa11.59□□□□□ -0.55
VPS25-201ENST00000253794 UPRTQ96BW1 309 aa11.59□□□□□ -0.55
VPS25-201ENST00000253794 SMR3AQ99954 134 aa11.59□□□□□ -0.55
VPS25-201ENST00000253794 GAL3ST2Q9H3Q3 398 aa11.59□□□□□ -0.55
VPS25-201ENST00000253794 AUNIPQ9H7T9 357 aa11.59□□□□□ -0.55
VPS25-201ENST00000253794 METTL8Q9H825 291 aaKnown RBP11.59□□□□□ -0.55
VPS25-201ENST00000253794 ADAM30Q9UKF2 790 aa11.59□□□□□ -0.55
VPS25-201ENST00000253794 ARHGAP32A7KAX9 2087 aa11.59□□□□□ -0.55
VPS25-201ENST00000253794 TRAV18A0A075B6X5 111 aa11.58□□□□□ -0.56
VPS25-201ENST00000253794 KBTBD11-OT1A0A1B0GTJ5 212 aa11.58□□□□□ -0.56
VPS25-201ENST00000253794 A8MV72 311 aaPredicted RBP11.58□□□□□ -0.56
VPS25-201ENST00000253794 FSHBP01225 129 aa11.58□□□□□ -0.56
VPS25-201ENST00000253794 DTYMKP23919 212 aa11.58□□□□□ -0.56
VPS25-201ENST00000253794 PRTN3P24158 256 aa11.58□□□□□ -0.56
VPS25-201ENST00000253794 PITPNAQ00169 270 aa11.58□□□□□ -0.56
VPS25-201ENST00000253794 C17orf58Q2M2W7 97 aa11.58□□□□□ -0.56
VPS25-201ENST00000253794 C6orf183Q5T699 404 aa11.58□□□□□ -0.56
VPS25-201ENST00000253794 OLFML2AQ68BL7 652 aa11.58□□□□□ -0.56
VPS25-201ENST00000253794 CLEC9AQ6UXN8 241 aa11.58□□□□□ -0.56
VPS25-201ENST00000253794 HEPN1Q6WQI6 88 aa11.58□□□□□ -0.56
VPS25-201ENST00000253794 Q6ZS49 121 aa11.58□□□□□ -0.56
VPS25-201ENST00000253794 LAX1Q8IWV1 398 aa11.58□□□□□ -0.56
VPS25-201ENST00000253794 TEX29Q8N6K0 151 aa11.58□□□□□ -0.56
VPS25-201ENST00000253794 OR10A7Q8NGE5 316 aa11.58□□□□□ -0.56
VPS25-201ENST00000253794 TBX15Q96SF7 602 aa11.58□□□□□ -0.56
VPS25-201ENST00000253794 CMSS1Q9BQ75 279 aaKnown RBP11.58□□□□□ -0.56
VPS25-201ENST00000253794 C7orf69Q9H7B7 122 aa11.58□□□□□ -0.56
VPS25-201ENST00000253794 RABL2AQ9UBK7 228 aaPredicted RBP11.58□□□□□ -0.56
VPS25-201ENST00000253794 MGAT4AQ9UM21 535 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms