RNA–Protein interactions for RNA: ENSMUST00000193839.5

Pcdha1-202, Transcript of Protocadherin alpha 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pcdha1, Length 4,925 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-202ENSMUST00000193839 Fosl1P48755 273 aa12.36□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Abcd3P55096 659 aa12.36□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 CiartQ3TQ03 375 aa12.36□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Ctsll3Q3ULP7 331 aa12.36□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Olfr843Q7TRG4 313 aa12.36□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 LgalslQ8VED9 172 aa12.36□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Olfr862Q8VFJ1 306 aa12.36□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Slc7a12Q8VIE6 465 aa12.36□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Dtd1Q9DD18 209 aaKnown RBP12.36□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Defb5Q9EPV9 64 aa12.36□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Mmp24Q9R0S2 618 aa12.36□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Btbd35f23A0A0R4J2B9 498 aa12.36□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Olfr587-ps1A0A1B0GSS1 159 aa12.36□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Arl16B1ATY8 173 aa12.36□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 AF067061O70616 171 aa12.36□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Cd79aP11911 220 aa12.36□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Npas1P97459 594 aa12.36□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Tspan7Q62283 249 aa12.36□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Olfr988Q7TRA1 309 aa12.36□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 DohhQ99LN9 302 aa12.36□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Tmem178aQ9CZ16 297 aa12.36□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Golt1aQ9DCQ3 133 aa12.36□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Olfr1326-ps1A0A140T8J7 311 aa12.36□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Gm45808A0A1B0GSH8 263 aa12.36□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Susd1E9Q3H4 752 aa12.36□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Vmn1r103K7N6X7 305 aa12.36□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Vmn1r80L7N1Z3 308 aa12.36□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Vmn1r151L7N288 305 aa12.36□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 MplQ08351 625 aa12.36□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Crebl2Q32M00 123 aa12.36□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Cd300lbQ3U497 209 aa12.36□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Foxl1Q64731 336 aa12.36□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Olfr645Q7TRQ1 315 aa12.36□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Flrt3Q8BGT1 649 aa12.36□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Rnf113a1Q8R3P8 341 aa12.36□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Suv39h2Q9EQQ0 477 aa12.36□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Gm12666A2AMD0 254 aaKnown RBP12.36□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Olfr39E9PVX1 319 aa12.36□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Gm5916G5E8W5 102 aa12.36□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Gpm6aP35802 278 aa12.36□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Clpsl2Q3UW21 102 aa12.36□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Wdr34Q5U4F6 535 aa12.36□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Cypt4Q6P925 153 aa12.36□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Pif1Q80SX8 650 aa12.36□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 ArsjQ8BM89 598 aa12.36□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Ankrd33Q8BXP5 385 aa12.36□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Olfr639Q8VGY8 316 aa12.36□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Tmem126bQ9D1R1 230 aa12.36□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Il17bQ9QXT6 180 aa12.36□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Gm28285A0A087WQ54 102 aa12.35□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Olfr911-ps1A0A140T8K0 311 aa12.35□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Usp36B1AQJ2 1098 aaKnown RBP12.35□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Scml2B1AVB3 969 aa12.35□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Ier2P17950 221 aa12.35□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 DaoP18894 345 aa12.35□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Acyp2P56375 106 aa12.35□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 RanP62827 216 aaKnown RBP12.35□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 A4gntQ14BT6 341 aa12.35□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 March1Q6NZQ8 289 aa12.35□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Gpr135Q7TQP2 457 aa12.35□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Olfr1286Q7TQY2 305 aa12.35□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Q80W69 301 aa12.35□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Vmn1r51Q8VIC6 319 aa12.35□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Scp2d1Q9DAH1 156 aa12.35□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Vmn1r41Q9EQ44 310 aa12.35□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Ccr9Q9WUT7 369 aa12.35□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Bdp1Q571C7 2467 aa12.35□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Mrm2Q9CPY0 246 aa12.35□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Ube2dnl2A2AFH2 155 aa12.35□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 9130204L05RikG3UWB8 92 aa12.35□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Casp16-psI6L890 176 aa12.35□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Cox5aP12787 146 aa12.35□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Egr3P43300 387 aa12.35□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 McptlQ00356 246 aa12.35□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Htr2bQ02152 479 aa12.35□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Mbd3l2Q3UXB0 228 aa12.35□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Fzd8Q61091 685 aa12.35□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Lcn12Q6JVL5 193 aa12.35□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Olfr1014Q7TR95 305 aa12.35□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Olfr1013Q7TR96 305 aa12.35□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Alkal2Q80UG6 151 aa12.35□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 4922502D21RikQ8C634 189 aa12.35□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Dnaja3Q99M87 480 aa12.35□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Tnfrsf12aQ9CR75 129 aa12.35□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Sec11cQ9D8V7 192 aa12.35□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Olfr888Q9EQA5 314 aa12.35□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Tas2r105Q9JKT4 300 aa12.35□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Cdhr4H3BJZ2 783 aa12.35□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Bmp8aP34821 399 aa12.35□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Hmx3P42581 356 aa12.35□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Rab11aP62492 216 aaKnown RBP12.35□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Ptp4a1Q63739 173 aa12.35□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Lrtm2Q8BGX3 370 aa12.35□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 CtsoQ8BM88 312 aa12.35□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Asb10Q91ZT7 467 aa12.35□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Npas3Q9QZQ0 925 aa12.35□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Arid2E9Q7E2 1828 aa12.35□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Baz2aQ91YE5 1889 aaKnown RBP12.34□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Olfr914E9PW59 316 aa12.34□□□□□ -0.43
Pcdha1-202ENSMUST00000193839 Olfr739E9Q1P0 309 aa12.34□□□□□ -0.43
Retrieved 100 of 22,080 RNA–protein pairs in 50 ms