RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 TK1P04183 234 aa16.78■□□□□ 0.28
PCDHB11-202ENST00000624887 SCTP09683 121 aa16.78■□□□□ 0.28
PCDHB11-202ENST00000624887 SELEP16581 610 aa16.78■□□□□ 0.28
PCDHB11-202ENST00000624887 PSG7Q13046 419 aa16.78■□□□□ 0.28
PCDHB11-202ENST00000624887 IGFBP7Q16270 282 aa16.78■□□□□ 0.28
PCDHB11-202ENST00000624887 FAM122CQ6P4D5 195 aa16.78■□□□□ 0.28
PCDHB11-202ENST00000624887 MSGN1A6NI15 193 aa16.78■□□□□ 0.28
PCDHB11-202ENST00000624887 KLK10O43240 276 aa16.78■□□□□ 0.28
PCDHB11-202ENST00000624887 TNFSF13O75888 250 aa16.78■□□□□ 0.28
PCDHB11-202ENST00000624887 DIRAS3O95661 229 aa16.78■□□□□ 0.28
PCDHB11-202ENST00000624887 CTXN2P0C2S0 81 aa16.78■□□□□ 0.28
PCDHB11-202ENST00000624887 EIF2S3P41091 472 aaKnown RBP16.78■□□□□ 0.28
PCDHB11-202ENST00000624887 HERPUD1Q15011 391 aa16.78■□□□□ 0.28
PCDHB11-202ENST00000624887 PXDC1Q5TGL8 231 aa16.78■□□□□ 0.28
PCDHB11-202ENST00000624887 UNQ6126/PRO20091Q6UXV3 157 aa16.78■□□□□ 0.28
PCDHB11-202ENST00000624887 LIAT1Q6ZQX7 453 aa16.78■□□□□ 0.28
PCDHB11-202ENST00000624887 Q8IYB0 196 aa16.78■□□□□ 0.28
PCDHB11-202ENST00000624887 OR11L1Q8NGX0 322 aa16.78■□□□□ 0.28
PCDHB11-202ENST00000624887 MRPL30Q8TCC3 161 aaKnown RBP16.78■□□□□ 0.28
PCDHB11-202ENST00000624887 CNTNAP3BQ96NU0 1288 aa16.78■□□□□ 0.28
PCDHB11-202ENST00000624887 ADAT1Q9BUB4 502 aaKnown RBP16.78■□□□□ 0.28
PCDHB11-202ENST00000624887 CNTNAP3Q9BZ76 1288 aa16.78■□□□□ 0.28
PCDHB11-202ENST00000624887 POLDIP2Q9Y2S7 368 aa16.78■□□□□ 0.28
PCDHB11-202ENST00000624887 FRYQ5TBA9 3013 aa16.78■□□□□ 0.28
PCDHB11-202ENST00000624887 HS3ST1O14792 307 aa16.77■□□□□ 0.28
PCDHB11-202ENST00000624887 SLC34A2O95436 690 aa16.77■□□□□ 0.28
PCDHB11-202ENST00000624887 S100A10P60903 97 aa16.77■□□□□ 0.28
PCDHB11-202ENST00000624887 NAAAQ02083 359 aa16.77■□□□□ 0.28
PCDHB11-202ENST00000624887 SNTB1Q13884 538 aaKnown RBP16.77■□□□□ 0.28
PCDHB11-202ENST00000624887 ALKBH6Q3KRA9 238 aa16.77■□□□□ 0.28
PCDHB11-202ENST00000624887 FAM74A1Q5RGS3 127 aa16.77■□□□□ 0.28
PCDHB11-202ENST00000624887 Q6ZS92 163 aa16.77■□□□□ 0.28
PCDHB11-202ENST00000624887 FAM185AQ8N0U4 392 aa16.77■□□□□ 0.28
PCDHB11-202ENST00000624887 SCCPDHQ8NBX0 429 aa16.77■□□□□ 0.28
PCDHB11-202ENST00000624887 GLYATL2Q8WU03 294 aa16.77■□□□□ 0.28
PCDHB11-202ENST00000624887 RDH5Q92781 318 aa16.77■□□□□ 0.28
PCDHB11-202ENST00000624887 MSI2Q96DH6 328 aaKnown RBP16.77■□□□□ 0.28
PCDHB11-202ENST00000624887 STARD4Q96DR4 205 aa16.77■□□□□ 0.28
PCDHB11-202ENST00000624887 C1QTNF6Q9BXI9 259 aa16.77■□□□□ 0.28
PCDHB11-202ENST00000624887 SHARPINQ9H0F6 387 aa16.77■□□□□ 0.28
PCDHB11-202ENST00000624887 MBD3L4A6NDZ8 208 aaPredicted RBP16.77■□□□□ 0.27
PCDHB11-202ENST00000624887 MBD3L3A6NE82 208 aaPredicted RBP16.77■□□□□ 0.27
PCDHB11-202ENST00000624887 MBD3L5A6NJ08 208 aaPredicted RBP16.77■□□□□ 0.27
PCDHB11-202ENST00000624887 WDR1O75083 606 aa16.77■□□□□ 0.27
PCDHB11-202ENST00000624887 AGFG2O95081 481 aa16.77■□□□□ 0.27
PCDHB11-202ENST00000624887 CGAP01215 116 aa16.77■□□□□ 0.27
PCDHB11-202ENST00000624887 GNRHRP30968 328 aa16.77■□□□□ 0.27
PCDHB11-202ENST00000624887 KCNJ3P48549 501 aa16.77■□□□□ 0.27
PCDHB11-202ENST00000624887 ERVK11-1P61568 191 aa16.77■□□□□ 0.27
PCDHB11-202ENST00000624887 PAN3Q58A45 887 aaKnown RBP16.77■□□□□ 0.27
PCDHB11-202ENST00000624887 Q6P435 159 aa16.77■□□□□ 0.27
PCDHB11-202ENST00000624887 C5orf24Q7Z6I8 188 aa16.77■□□□□ 0.27
PCDHB11-202ENST00000624887 ZNF610Q8N9Z0 462 aa16.77■□□□□ 0.27
PCDHB11-202ENST00000624887 MBD3L2Q8NHZ7 208 aaPredicted RBP16.77■□□□□ 0.27
PCDHB11-202ENST00000624887 KLF14Q8TD94 323 aaPredicted RBP16.77■□□□□ 0.27
PCDHB11-202ENST00000624887 C18orf12Q96KH6 178 aa16.77■□□□□ 0.27
PCDHB11-202ENST00000624887 CYTL1Q9NRR1 136 aa16.77■□□□□ 0.27
PCDHB11-202ENST00000624887 A0A1B0GW55 424 aa16.76■□□□□ 0.27
PCDHB11-202ENST00000624887 TUSC2O75896 110 aa16.76■□□□□ 0.27
PCDHB11-202ENST00000624887 DUX4L2P0CJ85 424 aa16.76■□□□□ 0.27
PCDHB11-202ENST00000624887 DUX4L3P0CJ86 424 aa16.76■□□□□ 0.27
PCDHB11-202ENST00000624887 DUX4L4P0CJ87 422 aa16.76■□□□□ 0.27
PCDHB11-202ENST00000624887 DUX4L5P0CJ88 424 aa16.76■□□□□ 0.27
PCDHB11-202ENST00000624887 DUX4L6P0CJ89 424 aa16.76■□□□□ 0.27
PCDHB11-202ENST00000624887 DUX4L7P0CJ90 424 aa16.76■□□□□ 0.27
PCDHB11-202ENST00000624887 ZNF880Q6PDB4 577 aa16.76■□□□□ 0.27
PCDHB11-202ENST00000624887 C20orf204Q6ZNR8 217 aa16.76■□□□□ 0.27
PCDHB11-202ENST00000624887 SEM1Q6ZVN7 128 aa16.76■□□□□ 0.27
PCDHB11-202ENST00000624887 CXorf67Q86X51 503 aaPredicted RBP16.76■□□□□ 0.27
PCDHB11-202ENST00000624887 FAM219AQ8IW50 185 aa16.76■□□□□ 0.27
PCDHB11-202ENST00000624887 LGI3Q8N145 548 aa16.76■□□□□ 0.27
PCDHB11-202ENST00000624887 SCNM1Q9BWG6 230 aa16.76■□□□□ 0.27
PCDHB11-202ENST00000624887 DUX4Q9UBX2 424 aa16.76■□□□□ 0.27
PCDHB11-202ENST00000624887 PROCRQ9UNN8 238 aa16.76■□□□□ 0.27
PCDHB11-202ENST00000624887 SPENQ96T58 3664 aaKnown RBP16.75■□□□□ 0.27
PCDHB11-202ENST00000624887 IGKV1-6A0A0C4DH72 117 aa16.75■□□□□ 0.27
PCDHB11-202ENST00000624887 C3orf80F5H4A9 247 aa16.75■□□□□ 0.27
PCDHB11-202ENST00000624887 H7C1Q1 480 aa16.75■□□□□ 0.27
PCDHB11-202ENST00000624887 DEGS1O15121 323 aa16.75■□□□□ 0.27
PCDHB11-202ENST00000624887 MPPED1O15442 326 aa16.75■□□□□ 0.27
PCDHB11-202ENST00000624887 TPT1P13693 172 aaKnown RBP16.75■□□□□ 0.27
PCDHB11-202ENST00000624887 MPV17P39210 176 aa16.75■□□□□ 0.27
PCDHB11-202ENST00000624887 ZNF154Q13106 437 aa16.75■□□□□ 0.27
PCDHB11-202ENST00000624887 LDLRAD3Q86YD5 345 aa16.75■□□□□ 0.27
PCDHB11-202ENST00000624887 OBP2BQ9NPH6 170 aa16.75■□□□□ 0.27
PCDHB11-202ENST00000624887 ZNF71Q9NQZ8 489 aaPredicted RBP16.75■□□□□ 0.27
PCDHB11-202ENST00000624887 GLS2Q9UI32 602 aa16.75■□□□□ 0.27
PCDHB11-202ENST00000624887 PHF1O43189 567 aaPredicted RBP16.75■□□□□ 0.27
PCDHB11-202ENST00000624887 DEDDO75618 318 aa16.75■□□□□ 0.27
PCDHB11-202ENST00000624887 PGA5P0DJD9 388 aa16.75■□□□□ 0.27
PCDHB11-202ENST00000624887 ZNF44P15621 663 aa16.75■□□□□ 0.27
PCDHB11-202ENST00000624887 TUBG1P23258 451 aa16.75■□□□□ 0.27
PCDHB11-202ENST00000624887 RND3P61587 244 aa16.75■□□□□ 0.27
PCDHB11-202ENST00000624887 P2RY6Q15077 328 aa16.75■□□□□ 0.27
PCDHB11-202ENST00000624887 LYZL2Q7Z4W2 148 aa16.75■□□□□ 0.27
PCDHB11-202ENST00000624887 HSD17B13Q7Z5P4 300 aaPredicted RBP16.75■□□□□ 0.27
PCDHB11-202ENST00000624887 NRIP2Q9BQI9 281 aa16.75■□□□□ 0.27
PCDHB11-202ENST00000624887 OPN3Q9H1Y3 402 aaPredicted RBP16.75■□□□□ 0.27
PCDHB11-202ENST00000624887 TUBG2Q9NRH3 451 aa16.75■□□□□ 0.27
PCDHB11-202ENST00000624887 SESN1Q9Y6P5 492 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms