RNA–Protein interactions for RNA: ENST00000621131.4

VPS29-212, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-212ENST00000621131 KLHDC2Q9Y2U9 406 aa3.93□□□□□ -1.78
VPS29-212ENST00000621131 ZNF175Q9Y473 711 aa3.93□□□□□ -1.78
VPS29-212ENST00000621131 UGT2A1Q9Y4X1 527 aa3.93□□□□□ -1.78
VPS29-212ENST00000621131 ETV7Q9Y603 341 aa3.93□□□□□ -1.78
VPS29-212ENST00000621131 HIVEP3Q5T1R4 2406 aa3.92□□□□□ -1.78
VPS29-212ENST00000621131 STAB1Q9NY15 2570 aa3.92□□□□□ -1.78
VPS29-212ENST00000621131 MPDZO75970 2070 aa3.92□□□□□ -1.78
VPS29-212ENST00000621131 SMIM30A4D0T7 59 aa3.92□□□□□ -1.78
VPS29-212ENST00000621131 PINLYPA6NC86 204 aa3.92□□□□□ -1.78
VPS29-212ENST00000621131 SLC22A20A6NK97 555 aa3.92□□□□□ -1.78
VPS29-212ENST00000621131 OR4C45A6NMZ5 311 aa3.92□□□□□ -1.78
VPS29-212ENST00000621131 CENPXA8MT69 81 aa3.92□□□□□ -1.78
VPS29-212ENST00000621131 AIPO00170 330 aa3.92□□□□□ -1.78
VPS29-212ENST00000621131 MAGEB4O15481 346 aaPredicted RBP3.92□□□□□ -1.78
VPS29-212ENST00000621131 SGCEO43556 437 aa3.92□□□□□ -1.78
VPS29-212ENST00000621131 SYT7O43581 403 aa3.92□□□□□ -1.78
VPS29-212ENST00000621131 HPGDSO60760 199 aa3.92□□□□□ -1.78
VPS29-212ENST00000621131 PFDN1O60925 122 aa3.92□□□□□ -1.78
VPS29-212ENST00000621131 MTRF1O75570 445 aaKnown RBP3.92□□□□□ -1.78
VPS29-212ENST00000621131 SC5DO75845 299 aa3.92□□□□□ -1.78
VPS29-212ENST00000621131 SCGNO76038 276 aa3.92□□□□□ -1.78
VPS29-212ENST00000621131 MPZL1O95297 269 aa3.92□□□□□ -1.78
VPS29-212ENST00000621131 PTTG1O95997 202 aa3.92□□□□□ -1.78
VPS29-212ENST00000621131 MAS1P04201 325 aa3.92□□□□□ -1.78
VPS29-212ENST00000621131 ISG15P05161 165 aa3.92□□□□□ -1.78
VPS29-212ENST00000621131 YES1P07947 543 aa3.92□□□□□ -1.78
VPS29-212ENST00000621131 CALCBP10092 127 aa3.92□□□□□ -1.78
VPS29-212ENST00000621131 CPN1P15169 458 aa3.92□□□□□ -1.78
VPS29-212ENST00000621131 DNASE1P24855 282 aa3.92□□□□□ -1.78
VPS29-212ENST00000621131 RPS27P42677 84 aaKnown RBP3.92□□□□□ -1.78
VPS29-212ENST00000621131 KIR3DL2P43630 455 aa3.92□□□□□ -1.78
VPS29-212ENST00000621131 CX3CR1P49238 355 aa3.92□□□□□ -1.78
VPS29-212ENST00000621131 STARP49675 285 aa3.92□□□□□ -1.78
VPS29-212ENST00000621131 ZNF133P52736 654 aaPredicted RBP3.92□□□□□ -1.78
VPS29-212ENST00000621131 CLDN18P56856 261 aa3.92□□□□□ -1.78
VPS29-212ENST00000621131 MRPS10P82664 201 aaKnown RBP3.92□□□□□ -1.78
VPS29-212ENST00000621131 FAM189A2Q15884 450 aa3.92□□□□□ -1.78
VPS29-212ENST00000621131 RAB11BQ15907 218 aa3.92□□□□□ -1.78
VPS29-212ENST00000621131 SLC36A2Q495M3 483 aa3.92□□□□□ -1.78
VPS29-212ENST00000621131 PYHIN1Q6K0P9 492 aa3.92□□□□□ -1.78
VPS29-212ENST00000621131 IGFL2Q6UWQ7 119 aa3.92□□□□□ -1.78
VPS29-212ENST00000621131 KRTAP5-2Q701N4 177 aa3.92□□□□□ -1.78
VPS29-212ENST00000621131 PGAP1Q75T13 922 aa3.92□□□□□ -1.78
VPS29-212ENST00000621131 SLC16A14Q7RTX9 510 aa3.92□□□□□ -1.78
VPS29-212ENST00000621131 TMEM123Q8N131 208 aa3.92□□□□□ -1.78
VPS29-212ENST00000621131 ABHD12Q8N2K0 398 aa3.92□□□□□ -1.78
VPS29-212ENST00000621131 FDCSPQ8NFU4 85 aa3.92□□□□□ -1.78
VPS29-212ENST00000621131 OR5D14Q8NGL3 314 aa3.92□□□□□ -1.78
VPS29-212ENST00000621131 OR10S1Q8NGN2 331 aa3.92□□□□□ -1.78
VPS29-212ENST00000621131 OR13C5Q8NGS8 318 aa3.92□□□□□ -1.78
VPS29-212ENST00000621131 ST7LQ8TDW4 575 aa3.92□□□□□ -1.78
VPS29-212ENST00000621131 ROBO4Q8WZ75 1007 aa3.92□□□□□ -1.78
VPS29-212ENST00000621131 S100A16Q96FQ6 103 aaKnown RBP3.92□□□□□ -1.78
VPS29-212ENST00000621131 ZNF416Q9BWM5 594 aa3.92□□□□□ -1.78
VPS29-212ENST00000621131 HES7Q9BYE0 225 aa3.92□□□□□ -1.78
VPS29-212ENST00000621131 PBOV1Q9GZY1 135 aa3.92□□□□□ -1.78
VPS29-212ENST00000621131 DEFB127Q9H1M4 99 aa3.92□□□□□ -1.78
VPS29-212ENST00000621131 PRORYQ9H606 182 aa3.92□□□□□ -1.78
VPS29-212ENST00000621131 RNF121Q9H920 327 aa3.92□□□□□ -1.78
VPS29-212ENST00000621131 PLEK2Q9NYT0 353 aa3.92□□□□□ -1.78
VPS29-212ENST00000621131 NUFIP1Q9UHK0 495 aaKnown RBP3.92□□□□□ -1.78
VPS29-212ENST00000621131 CYB5R1Q9UHQ9 305 aa3.92□□□□□ -1.78
VPS29-212ENST00000621131 ATPIF1Q9UII2 106 aa3.92□□□□□ -1.78
VPS29-212ENST00000621131 ZNF391Q9UJN7 358 aa3.92□□□□□ -1.78
VPS29-212ENST00000621131 SPATA2Q9UM82 520 aa3.92□□□□□ -1.78
VPS29-212ENST00000621131 LHFPL6Q9Y693 200 aa3.92□□□□□ -1.78
VPS29-212ENST00000621131 TACC2O95359 2948 aa3.92□□□□□ -1.78
VPS29-212ENST00000621131 RP1L1Q8IWN7 2480 aaPredicted RBP3.92□□□□□ -1.78
VPS29-212ENST00000621131 IGKV1D-43A0A0B4J1Z2 117 aa3.91□□□□□ -1.78
VPS29-212ENST00000621131 A0A1W2PPK0 400 aa3.91□□□□□ -1.78
VPS29-212ENST00000621131 OR6C6A6NF89 314 aa3.91□□□□□ -1.78
VPS29-212ENST00000621131 IFITM5A6NNB3 132 aa3.91□□□□□ -1.78
VPS29-212ENST00000621131 ZNF716A6NP11 495 aa3.91□□□□□ -1.78
VPS29-212ENST00000621131 SNURFLB1AK76 121 aa3.91□□□□□ -1.78
VPS29-212ENST00000621131 M0R135 149 aa3.91□□□□□ -1.78
VPS29-212ENST00000621131 XRCC2O43543 280 aa3.91□□□□□ -1.78
VPS29-212ENST00000621131 SULT1B1O43704 296 aa3.91□□□□□ -1.78
VPS29-212ENST00000621131 RAMP1O60894 148 aa3.91□□□□□ -1.78
VPS29-212ENST00000621131 CEACAM4O75871 244 aa3.91□□□□□ -1.78
VPS29-212ENST00000621131 UBL3O95164 117 aa3.91□□□□□ -1.78
VPS29-212ENST00000621131 IGHG3P01860 377 aa3.91□□□□□ -1.78
VPS29-212ENST00000621131 GSTT2BP0CG30 244 aa3.91□□□□□ -1.78
VPS29-212ENST00000621131 RAB3AP20336 220 aa3.91□□□□□ -1.78
VPS29-212ENST00000621131 MPZP25189 248 aa3.91□□□□□ -1.78
VPS29-212ENST00000621131 AZGP1P25311 298 aaKnown RBP3.91□□□□□ -1.78
VPS29-212ENST00000621131 ARR3P36575 388 aa3.91□□□□□ -1.78
VPS29-212ENST00000621131 HTR5AP47898 357 aa3.91□□□□□ -1.78
VPS29-212ENST00000621131 PITPNBP48739 271 aa3.91□□□□□ -1.78
VPS29-212ENST00000621131 EVX1P49640 407 aa3.91□□□□□ -1.78
VPS29-212ENST00000621131 PRKXP51817 358 aa3.91□□□□□ -1.78
VPS29-212ENST00000621131 AP3S2P59780 193 aa3.91□□□□□ -1.78
VPS29-212ENST00000621131 RPS11P62280 158 aaKnown RBP eCLIP3.91□□□□□ -1.78
VPS29-212ENST00000621131 GALK2Q01415 458 aa3.91□□□□□ -1.78
VPS29-212ENST00000621131 TGFBR3Q03167 851 aa3.91□□□□□ -1.78
VPS29-212ENST00000621131 MFGE8Q08431 387 aaPredicted RBP3.91□□□□□ -1.78
VPS29-212ENST00000621131 CEACAM16Q2WEN9 425 aa3.91□□□□□ -1.78
VPS29-212ENST00000621131 FAM27D1Q5T7N8 215 aa3.91□□□□□ -1.78
VPS29-212ENST00000621131 HES5Q5TA89 166 aa3.91□□□□□ -1.78
VPS29-212ENST00000621131 FAM27BQ5VT28 67 aa3.91□□□□□ -1.78
VPS29-212ENST00000621131 ZNF57Q68EA5 555 aaPredicted RBP3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms