RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 PNRC1Q12796 327 aaPredicted RBP7.74□□□□□ -1.17
CSMD1-216ENST00000602557 OR10G4Q8NGN3 311 aa7.74□□□□□ -1.17
CSMD1-216ENST00000602557 OR10G9Q8NGN4 311 aa7.74□□□□□ -1.17
CSMD1-216ENST00000602557 OR10G7Q8NGN6 311 aa7.74□□□□□ -1.17
CSMD1-216ENST00000602557 GALMQ96C23 342 aa7.74□□□□□ -1.17
CSMD1-216ENST00000602557 PIK3IP1Q96FE7 263 aa7.74□□□□□ -1.17
CSMD1-216ENST00000602557 OR2A5Q96R48 311 aa7.74□□□□□ -1.17
CSMD1-216ENST00000602557 CD40P25942 277 aa7.74□□□□□ -1.17
CSMD1-216ENST00000602557 CDX1P47902 265 aaPredicted RBP7.74□□□□□ -1.17
CSMD1-216ENST00000602557 ATRAIDQ6UW56 229 aa7.74□□□□□ -1.17
CSMD1-216ENST00000602557 OR2C3Q8N628 320 aa7.74□□□□□ -1.17
CSMD1-216ENST00000602557 ST6GALNAC6Q969X2 333 aa7.74□□□□□ -1.17
CSMD1-216ENST00000602557 WDR61Q9GZS3 305 aaKnown RBP7.74□□□□□ -1.17
CSMD1-216ENST00000602557 SNURFLB1AK76 121 aa7.73□□□□□ -1.17
CSMD1-216ENST00000602557 EPHA8P29322 1005 aaPredicted RBP7.73□□□□□ -1.17
CSMD1-216ENST00000602557 SHBQ15464 509 aa7.73□□□□□ -1.17
CSMD1-216ENST00000602557 KHDC3LQ587J8 217 aa7.73□□□□□ -1.17
CSMD1-216ENST00000602557 VASH2Q86V25 355 aa7.73□□□□□ -1.17
CSMD1-216ENST00000602557 MRGPRX4Q96LA9 322 aa7.73□□□□□ -1.17
CSMD1-216ENST00000602557 NUDT16L1Q9BRJ7 211 aaKnown RBP7.73□□□□□ -1.17
CSMD1-216ENST00000602557 LRP12Q9Y561 859 aa7.73□□□□□ -1.17
CSMD1-216ENST00000602557 IGFBP6P24592 240 aaPredicted RBP7.73□□□□□ -1.17
CSMD1-216ENST00000602557 HIST1H2BAQ96A08 127 aa7.73□□□□□ -1.17
CSMD1-216ENST00000602557 KTI12Q96EK9 354 aaPredicted RBP7.73□□□□□ -1.17
CSMD1-216ENST00000602557 MENTQ9BUN1 341 aa7.73□□□□□ -1.17
CSMD1-216ENST00000602557 MANBALQ9NQG1 85 aa7.73□□□□□ -1.17
CSMD1-216ENST00000602557 FRG2CA6NGY1 282 aa7.73□□□□□ -1.17
CSMD1-216ENST00000602557 TSPAN13O95857 204 aa7.73□□□□□ -1.17
CSMD1-216ENST00000602557 GP1BAP07359 652 aa7.73□□□□□ -1.17
CSMD1-216ENST00000602557 CAMKMTQ7Z624 323 aa7.73□□□□□ -1.17
CSMD1-216ENST00000602557 EID2BQ96D98 161 aa7.73□□□□□ -1.17
CSMD1-216ENST00000602557 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.73□□□□□ -1.17
CSMD1-216ENST00000602557 H0YIG0 161 aa7.73□□□□□ -1.17
CSMD1-216ENST00000602557 FBXL14Q8N1E6 418 aa7.73□□□□□ -1.17
CSMD1-216ENST00000602557 LOXL2Q9Y4K0 774 aa7.73□□□□□ -1.17
CSMD1-216ENST00000602557 SHISA8B8ZZ34 492 aa7.73□□□□□ -1.17
CSMD1-216ENST00000602557 VSIG4Q9Y279 399 aa7.73□□□□□ -1.17
CSMD1-216ENST00000602557 ANKRD20A5PA0PJZ0 165 aa7.73□□□□□ -1.17
CSMD1-216ENST00000602557 DHRS7CA6NNS2 312 aa7.73□□□□□ -1.17
CSMD1-216ENST00000602557 FLYWCH2Q96CP2 140 aaKnown RBP7.73□□□□□ -1.17
CSMD1-216ENST00000602557 ONECUT1Q9UBC0 465 aa7.73□□□□□ -1.17
CSMD1-216ENST00000602557 CACNG5Q9UF02 275 aa7.73□□□□□ -1.17
CSMD1-216ENST00000602557 MYEOVQ96EZ4 313 aa7.73□□□□□ -1.17
CSMD1-216ENST00000602557 FZR1Q9UM11 496 aa7.73□□□□□ -1.17
CSMD1-216ENST00000602557 KIRREL2Q6UWL6 708 aa7.73□□□□□ -1.17
CSMD1-216ENST00000602557 STARD10Q9Y365 291 aa7.73□□□□□ -1.17
CSMD1-216ENST00000602557 ZGLP1P0C6A0 271 aa7.73□□□□□ -1.17
CSMD1-216ENST00000602557 PNLIPRP3Q17RR3 467 aa7.73□□□□□ -1.17
CSMD1-216ENST00000602557 OSR2Q8N2R0 312 aa7.73□□□□□ -1.17
CSMD1-216ENST00000602557 OR10V1Q8NGI7 309 aa7.73□□□□□ -1.17
CSMD1-216ENST00000602557 PLPPR2Q96GM1 343 aa7.73□□□□□ -1.17
CSMD1-216ENST00000602557 A0A0A6YYD5 115 aa7.73□□□□□ -1.17
CSMD1-216ENST00000602557 A0A1B0GTH9 108 aa7.73□□□□□ -1.17
CSMD1-216ENST00000602557 PRRG2O14669 202 aa7.73□□□□□ -1.17
CSMD1-216ENST00000602557 MYF5P13349 255 aa7.73□□□□□ -1.17
CSMD1-216ENST00000602557 FGF9P31371 208 aaPredicted RBP7.73□□□□□ -1.17
CSMD1-216ENST00000602557 OR2T6Q8NHC8 308 aa7.73□□□□□ -1.17
CSMD1-216ENST00000602557 MBD3L1Q8WWY6 194 aa7.73□□□□□ -1.17
CSMD1-216ENST00000602557 MOB3AQ96BX8 217 aa7.73□□□□□ -1.17
CSMD1-216ENST00000602557 TREM2Q9NZC2 230 aa7.73□□□□□ -1.17
CSMD1-216ENST00000602557 GSTZ1O43708 216 aaPredicted RBP7.72□□□□□ -1.17
CSMD1-216ENST00000602557 IL2RAP01589 272 aa7.72□□□□□ -1.17
CSMD1-216ENST00000602557 CLEC18BQ6UXF7 455 aa7.72□□□□□ -1.17
CSMD1-216ENST00000602557 TLNRD1Q9H1K6 362 aa7.72□□□□□ -1.17
CSMD1-216ENST00000602557 WNK3Q9BYP7 1800 aa7.72□□□□□ -1.17
CSMD1-216ENST00000602557 SNCGO76070 127 aa7.72□□□□□ -1.17
CSMD1-216ENST00000602557 NOXO1Q8NFA2 376 aa7.72□□□□□ -1.17
CSMD1-216ENST00000602557 OR1F12Q8NHA8 337 aa7.72□□□□□ -1.17
CSMD1-216ENST00000602557 MRGPRX1Q96LB2 322 aa7.72□□□□□ -1.17
CSMD1-216ENST00000602557 MMP17Q9ULZ9 603 aa7.72□□□□□ -1.17
CSMD1-216ENST00000602557 AHDC1Q5TGY3 1603 aaPredicted RBP7.72□□□□□ -1.17
CSMD1-216ENST00000602557 SLC17A2O00624 439 aa7.72□□□□□ -1.17
CSMD1-216ENST00000602557 CALHM3Q86XJ0 350 aa7.72□□□□□ -1.17
CSMD1-216ENST00000602557 OR8B3Q8NGG8 313 aa7.72□□□□□ -1.17
CSMD1-216ENST00000602557 B9D1Q9UPM9 204 aa7.72□□□□□ -1.17
CSMD1-216ENST00000602557 TMEM230Q96A57 120 aa7.72□□□□□ -1.17
CSMD1-216ENST00000602557 GRIFINA4D1Z8 144 aa7.72□□□□□ -1.17
CSMD1-216ENST00000602557 HSPB2A8KAH6 182 aa7.72□□□□□ -1.17
CSMD1-216ENST00000602557 CXCL13O43927 109 aa7.72□□□□□ -1.17
CSMD1-216ENST00000602557 HSPB2Q16082 182 aa7.72□□□□□ -1.17
CSMD1-216ENST00000602557 DEFB109BQ30KR1 87 aa7.72□□□□□ -1.17
CSMD1-216ENST00000602557 ZNF660Q6AZW8 331 aaPredicted RBP7.72□□□□□ -1.17
CSMD1-216ENST00000602557 ZNF418Q8TF45 676 aaPredicted RBP7.72□□□□□ -1.17
CSMD1-216ENST00000602557 TRGV10A0A0A0MS01 117 aa7.72□□□□□ -1.17
CSMD1-216ENST00000602557 SERPINE3A8MV23 424 aa7.72□□□□□ -1.17
CSMD1-216ENST00000602557 DEFB108AA8MXU0 73 aa7.72□□□□□ -1.17
CSMD1-216ENST00000602557 NPBWR2P48146 333 aa7.72□□□□□ -1.17
CSMD1-216ENST00000602557 TMEM255AQ5JRV8 349 aa7.72□□□□□ -1.17
CSMD1-216ENST00000602557 C12orf54Q6X4T0 127 aa7.72□□□□□ -1.17
CSMD1-216ENST00000602557 RARRES2Q99969 163 aa7.72□□□□□ -1.17
CSMD1-216ENST00000602557 KLF13Q9Y2Y9 288 aaPredicted RBP7.72□□□□□ -1.17
CSMD1-216ENST00000602557 PMS2P1A4D2B8 440 aa7.72□□□□□ -1.17
CSMD1-216ENST00000602557 MPTX1A8MV57 137 aa7.72□□□□□ -1.17
CSMD1-216ENST00000602557 SRSF10O75494 262 aaKnown RBP7.72□□□□□ -1.17
CSMD1-216ENST00000602557 IGLV3-27P01718 113 aa7.72□□□□□ -1.17
CSMD1-216ENST00000602557 HOXB1P14653 301 aaPredicted RBP7.72□□□□□ -1.17
CSMD1-216ENST00000602557 D2HGDHQ8N465 521 aa7.72□□□□□ -1.17
CSMD1-216ENST00000602557 CADM4Q8NFZ8 388 aa7.72□□□□□ -1.17
CSMD1-216ENST00000602557 TBX21Q9UL17 535 aa7.72□□□□□ -1.17
CSMD1-216ENST00000602557 DOCK4Q8N1I0 1966 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms