RNA–Protein interactions for RNA: ENST00000601236.1

U2AF1L4-221, Transcript of U2 small nuclear RNA auxiliary factor 1 like 4, human

TSL 3

Gene U2AF1L4, Length 455 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
U2AF1L4-221	ENST00000601236	TGIF2-C20orf24	A0A0A6YYL0	155 aa		10.16	□□□□□ -0.78
U2AF1L4-221	ENST00000601236	ZNF816-ZNF321P	A0A0X1KG74	233 aa		10.16	□□□□□ -0.78
U2AF1L4-221	ENST00000601236	LNP1	A1A4G5	178 aa		10.16	□□□□□ -0.78
U2AF1L4-221	ENST00000601236	TMEM210	A6NLX4	147 aa		10.16	□□□□□ -0.78
U2AF1L4-221	ENST00000601236	ZNF727	A8MUV8	499 aa		10.16	□□□□□ -0.78
U2AF1L4-221	ENST00000601236		B4DGG1	531 aa		10.16	□□□□□ -0.78
U2AF1L4-221	ENST00000601236		H7BYZ3	331 aa		10.16	□□□□□ -0.78
U2AF1L4-221	ENST00000601236	RER1	O15258	196 aa		10.16	□□□□□ -0.78
U2AF1L4-221	ENST00000601236	DUX1	O43812	170 aa		10.16	□□□□□ -0.78
U2AF1L4-221	ENST00000601236	MMP23A	O75900	390 aa		10.16	□□□□□ -0.78
U2AF1L4-221	ENST00000601236	SELL	P14151	372 aa		10.16	□□□□□ -0.78
U2AF1L4-221	ENST00000601236	OR10J1	P30954	320 aa		10.16	□□□□□ -0.78
U2AF1L4-221	ENST00000601236	FHIT	P49789	147 aa		10.16	□□□□□ -0.78
U2AF1L4-221	ENST00000601236	DYNLT3	P51808	116 aa		10.16	□□□□□ -0.78
U2AF1L4-221	ENST00000601236	RBM11	P57052	281 aa	Known RBP	10.16	□□□□□ -0.78
U2AF1L4-221	ENST00000601236	PPP1CA	P62136	330 aa		10.16	□□□□□ -0.78
U2AF1L4-221	ENST00000601236	RAB11A	P62491	216 aa		10.16	□□□□□ -0.78
U2AF1L4-221	ENST00000601236	ENDOG	Q14249	297 aa	Known RBP	10.16	□□□□□ -0.78
U2AF1L4-221	ENST00000601236	BSX	Q3C1V8	233 aa		10.16	□□□□□ -0.78
U2AF1L4-221	ENST00000601236	WDR74	Q6RFH5	385 aa	Predicted RBP	10.16	□□□□□ -0.78
U2AF1L4-221	ENST00000601236	PPP1R3B	Q86XI6	285 aa		10.16	□□□□□ -0.78
U2AF1L4-221	ENST00000601236	ZBTB34	Q8NCN2	500 aa		10.16	□□□□□ -0.78
U2AF1L4-221	ENST00000601236	NFAM1	Q8NET5	270 aa	Predicted RBP	10.16	□□□□□ -0.78
U2AF1L4-221	ENST00000601236	OR51G1	Q8NGK1	321 aa		10.16	□□□□□ -0.78
U2AF1L4-221	ENST00000601236	SPSB4	Q96A44	273 aa		10.16	□□□□□ -0.78
U2AF1L4-221	ENST00000601236	LYZL4	Q96KX0	146 aa		10.16	□□□□□ -0.78
U2AF1L4-221	ENST00000601236	RBM14	Q96PK6	669 aa	Known RBP	10.16	□□□□□ -0.78
U2AF1L4-221	ENST00000601236	SIGLEC12	Q96PQ1	595 aa		10.16	□□□□□ -0.78
U2AF1L4-221	ENST00000601236	TMEM204	Q9BSN7	226 aa		10.16	□□□□□ -0.78
U2AF1L4-221	ENST00000601236	DDA1	Q9BW61	102 aa		10.16	□□□□□ -0.78
U2AF1L4-221	ENST00000601236	ZNF319	Q9P2F9	582 aa		10.16	□□□□□ -0.78
U2AF1L4-221	ENST00000601236	PRSS50	Q9UI38	385 aa		10.16	□□□□□ -0.78
U2AF1L4-221	ENST00000601236	KIR2DL5B	A0A0G2JN68	375 aa		10.15	□□□□□ -0.78
U2AF1L4-221	ENST00000601236	KIR2DL5B	A0A0G2JPC4	375 aa		10.15	□□□□□ -0.78
U2AF1L4-221	ENST00000601236		A0A1B0GV90	55 aa		10.15	□□□□□ -0.78
U2AF1L4-221	ENST00000601236		A0A1W2PP11	408 aa		10.15	□□□□□ -0.78
U2AF1L4-221	ENST00000601236	NKX2-6	A6NCS4	301 aa		10.15	□□□□□ -0.78
U2AF1L4-221	ENST00000601236	FAM24A	A6NFZ4	105 aa		10.15	□□□□□ -0.78
U2AF1L4-221	ENST00000601236	DEGS1	O15121	323 aa		10.15	□□□□□ -0.78
U2AF1L4-221	ENST00000601236	NAPSA	O96009	420 aa		10.15	□□□□□ -0.78
U2AF1L4-221	ENST00000601236	NRAS	P01111	189 aa		10.15	□□□□□ -0.78
U2AF1L4-221	ENST00000601236	AMBP	P02760	352 aa		10.15	□□□□□ -0.78
U2AF1L4-221	ENST00000601236	MEF2B	Q02080	365 aa	Predicted RBP	10.15	□□□□□ -0.78
U2AF1L4-221	ENST00000601236	FOXL1	Q12952	345 aa		10.15	□□□□□ -0.78
U2AF1L4-221	ENST00000601236	TGIF1	Q15583	401 aa		10.15	□□□□□ -0.78
U2AF1L4-221	ENST00000601236	USF2	Q15853	346 aa	Predicted RBP	10.15	□□□□□ -0.78
U2AF1L4-221	ENST00000601236	LRRC75B	Q2VPJ9	315 aa		10.15	□□□□□ -0.78
U2AF1L4-221	ENST00000601236	ACTL10	Q5JWF8	245 aa		10.15	□□□□□ -0.78
U2AF1L4-221	ENST00000601236	WDR25	Q64LD2	544 aa	Predicted RBP	10.15	□□□□□ -0.78
U2AF1L4-221	ENST00000601236	C1QL2	Q7Z5L3	287 aa		10.15	□□□□□ -0.78
U2AF1L4-221	ENST00000601236	KIR2DL5A	Q8N109	375 aa		10.15	□□□□□ -0.78
U2AF1L4-221	ENST00000601236	OR2M3	Q8NG83	312 aa		10.15	□□□□□ -0.78
U2AF1L4-221	ENST00000601236	OR5L1	Q8NGL2	311 aa		10.15	□□□□□ -0.78
U2AF1L4-221	ENST00000601236	OR4X1	Q8NH49	305 aa		10.15	□□□□□ -0.78
U2AF1L4-221	ENST00000601236	CPT1C	Q8TCG5	803 aa		10.15	□□□□□ -0.78
U2AF1L4-221	ENST00000601236	MEGF10	Q96KG7	1140 aa		10.15	□□□□□ -0.78
U2AF1L4-221	ENST00000601236	NKX3-1	Q99801	234 aa	Predicted RBP	10.15	□□□□□ -0.78
U2AF1L4-221	ENST00000601236	FAAP24	Q9BTP7	215 aa		10.15	□□□□□ -0.78
U2AF1L4-221	ENST00000601236	PLA2G2F	Q9BZM2	168 aa		10.15	□□□□□ -0.78
U2AF1L4-221	ENST00000601236	OR51I2	Q9H344	312 aa		10.15	□□□□□ -0.78
U2AF1L4-221	ENST00000601236	KLRF1	Q9NZS2	232 aa		10.15	□□□□□ -0.78
U2AF1L4-221	ENST00000601236	MYOT	Q9UBF9	498 aa		10.15	□□□□□ -0.78
U2AF1L4-221	ENST00000601236	NXT1	Q9UKK6	140 aa	Known RBP	10.15	□□□□□ -0.78
U2AF1L4-221	ENST00000601236	HS3ST3B1	Q9Y662	390 aa		10.15	□□□□□ -0.78
U2AF1L4-221	ENST00000601236	ATP23	Q9Y6H3	246 aa		10.15	□□□□□ -0.78
U2AF1L4-221	ENST00000601236	IGKV1D-8	A0A087WSZ0	117 aa		10.14	□□□□□ -0.79
U2AF1L4-221	ENST00000601236	IGHV5-51	A0A0C4DH38	117 aa		10.14	□□□□□ -0.79
U2AF1L4-221	ENST00000601236	CTXND1	A0A1B0GTU2	59 aa		10.14	□□□□□ -0.79
U2AF1L4-221	ENST00000601236	MAP1LC3B2	A6NCE7	125 aa		10.14	□□□□□ -0.79
U2AF1L4-221	ENST00000601236	TMPRSS2	O15393	492 aa		10.14	□□□□□ -0.79
U2AF1L4-221	ENST00000601236	PDE6D	O43924	150 aa		10.14	□□□□□ -0.79
U2AF1L4-221	ENST00000601236	SSSCA1	O60232	199 aa		10.14	□□□□□ -0.79
U2AF1L4-221	ENST00000601236	C1QL1	O75973	258 aa		10.14	□□□□□ -0.79
U2AF1L4-221	ENST00000601236	ESD	P10768	282 aa		10.14	□□□□□ -0.79
U2AF1L4-221	ENST00000601236	FAH	P16930	419 aa		10.14	□□□□□ -0.79
U2AF1L4-221	ENST00000601236	GNRHR	P30968	328 aa		10.14	□□□□□ -0.79
U2AF1L4-221	ENST00000601236	ZNF92	Q03936	586 aa		10.14	□□□□□ -0.79
U2AF1L4-221	ENST00000601236	DCAF10	Q5QP82	559 aa		10.14	□□□□□ -0.79
U2AF1L4-221	ENST00000601236	ZNF385C	Q66K41	422 aa	Predicted RBP	10.14	□□□□□ -0.79
U2AF1L4-221	ENST00000601236	ZC3HAV1	Q7Z2W4	902 aa	Known RBP	10.14	□□□□□ -0.79
U2AF1L4-221	ENST00000601236	TBC1D26	Q86UD7	250 aa		10.14	□□□□□ -0.79
U2AF1L4-221	ENST00000601236	C7orf61	Q8IZ16	206 aa		10.14	□□□□□ -0.79
U2AF1L4-221	ENST00000601236	ARL6IP6	Q8N6S5	226 aa		10.14	□□□□□ -0.79
U2AF1L4-221	ENST00000601236	C12orf76	Q8N812	135 aa	Predicted RBP	10.14	□□□□□ -0.79
U2AF1L4-221	ENST00000601236	OR2T10	Q8NGZ9	312 aa		10.14	□□□□□ -0.79
U2AF1L4-221	ENST00000601236	TMEM171	Q8WVE6	324 aa		10.14	□□□□□ -0.79
U2AF1L4-221	ENST00000601236	NABP1	Q96AH0	204 aa		10.14	□□□□□ -0.79
U2AF1L4-221	ENST00000601236	CIB3	Q96Q77	187 aa	Predicted RBP	10.14	□□□□□ -0.79
U2AF1L4-221	ENST00000601236	SPACA5	Q96QH8	159 aa		10.14	□□□□□ -0.79
U2AF1L4-221	ENST00000601236	TP53RK	Q96S44	253 aa		10.14	□□□□□ -0.79
U2AF1L4-221	ENST00000601236	C20orf144	Q9BQM9	153 aa		10.14	□□□□□ -0.79
U2AF1L4-221	ENST00000601236	MAP1LC3B	Q9GZQ8	125 aa		10.14	□□□□□ -0.79
U2AF1L4-221	ENST00000601236	PRDM14	Q9GZV8	571 aa		10.14	□□□□□ -0.79
U2AF1L4-221	ENST00000601236	METTL7A	Q9H8H3	244 aa		10.14	□□□□□ -0.79
U2AF1L4-221	ENST00000601236	LIN7C	Q9NUP9	197 aa	Known RBP	10.14	□□□□□ -0.79
U2AF1L4-221	ENST00000601236	PRR13	Q9NZ81	148 aa		10.14	□□□□□ -0.79
U2AF1L4-221	ENST00000601236	LAMP3	Q9UQV4	416 aa		10.14	□□□□□ -0.79
U2AF1L4-221	ENST00000601236	ST3GAL6	Q9Y274	331 aa		10.14	□□□□□ -0.79
U2AF1L4-221	ENST00000601236	TRBV9	A0A0B4J1U6	114 aa		10.13	□□□□□ -0.79
U2AF1L4-221	ENST00000601236	XKRY2	A2RUG3	117 aa		10.13	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms