RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 KIAA1456Q9P272 454 aa15.03■□□□□ -0
SCARF1-205ENST00000571272 HOXA5P20719 270 aa15.03■□□□□ -0
SCARF1-205ENST00000571272 ERVFRD-1P60508 538 aa15.03■□□□□ -0
SCARF1-205ENST00000571272 CDPF1Q6NVV7 123 aa15.03■□□□□ -0
SCARF1-205ENST00000571272 FOXB1Q99853 325 aa15.03■□□□□ -0
SCARF1-205ENST00000571272 OR2H1Q9GZK4 316 aa15.03■□□□□ -0
SCARF1-205ENST00000571272 ZNF576Q9H609 170 aa15.03■□□□□ -0
SCARF1-205ENST00000571272 DOK5Q9P104 306 aa15.03■□□□□ -0
SCARF1-205ENST00000571272 DMDP11532 3685 aa15.02■□□□□ -0
SCARF1-205ENST00000571272 LY6G6EA0A0G2JKS1 128 aa15.02■□□□□ -0
SCARF1-205ENST00000571272 A0A0G2JMM0 328 aa15.02■□□□□ -0
SCARF1-205ENST00000571272 A0A1W2PPB8 328 aa15.02■□□□□ -0
SCARF1-205ENST00000571272 A0A1W2PRS3 328 aa15.02■□□□□ -0
SCARF1-205ENST00000571272 KIR3DP1A8MWS1 328 aa15.02■□□□□ -0
SCARF1-205ENST00000571272 H3BP45 60 aa15.02■□□□□ -0
SCARF1-205ENST00000571272 CHST1O43916 411 aa15.02■□□□□ -0
SCARF1-205ENST00000571272 CXCL13O43927 109 aa15.02■□□□□ -0
SCARF1-205ENST00000571272 UMODP07911 640 aa15.02■□□□□ -0
SCARF1-205ENST00000571272 CARD18P57730 90 aa15.02■□□□□ -0
SCARF1-205ENST00000571272 SRPXP78539 464 aa15.02■□□□□ -0
SCARF1-205ENST00000571272 ICAM4Q14773 271 aa15.02■□□□□ -0
SCARF1-205ENST00000571272 ELOBQ15370 118 aa15.02■□□□□ -0
SCARF1-205ENST00000571272 CPNE4Q96A23 557 aaPredicted RBP15.02■□□□□ -0
SCARF1-205ENST00000571272 TMEM56Q96MV1 263 aa15.02■□□□□ -0
SCARF1-205ENST00000571272 SMDT1Q9H4I9 107 aa15.02■□□□□ -0
SCARF1-205ENST00000571272 UNKLQ9H9P5 680 aaKnown RBP15.02■□□□□ -0
SCARF1-205ENST00000571272 IL36GQ9NZH8 169 aa15.02■□□□□ -0
SCARF1-205ENST00000571272 WSB1Q9Y6I7 421 aa15.02■□□□□ -0
SCARF1-205ENST00000571272 TMEM56-RWDD3S4R434 201 aa15.02■□□□□ -0
SCARF1-205ENST00000571272 U3KQA8 63 aa15.02■□□□□ -0
SCARF1-205ENST00000571272 TGIF2-C20orf24A0A0A6YYL0 155 aa15.02□□□□□ -0.01
SCARF1-205ENST00000571272 ZNF816-ZNF321PA0A0X1KG74 233 aa15.02□□□□□ -0.01
SCARF1-205ENST00000571272 SCAF4O95104 1147 aaKnown RBP15.02□□□□□ -0.01
SCARF1-205ENST00000571272 TK1P04183 234 aa15.02□□□□□ -0.01
SCARF1-205ENST00000571272 EDN3P14138 238 aa15.02□□□□□ -0.01
SCARF1-205ENST00000571272 RAC3P60763 192 aa15.02□□□□□ -0.01
SCARF1-205ENST00000571272 EXT1Q16394 746 aa15.02□□□□□ -0.01
SCARF1-205ENST00000571272 PYY3Q5JQD4 70 aa15.02□□□□□ -0.01
SCARF1-205ENST00000571272 C9orf152Q5JTZ5 239 aa15.02□□□□□ -0.01
SCARF1-205ENST00000571272 IMMP1LQ96LU5 166 aa15.02□□□□□ -0.01
SCARF1-205ENST00000571272 SPIN2AQ99865 258 aa15.02□□□□□ -0.01
SCARF1-205ENST00000571272 SPIN2BQ9BPZ2 258 aa15.02□□□□□ -0.01
SCARF1-205ENST00000571272 CCL28Q9NRJ3 127 aa15.02□□□□□ -0.01
SCARF1-205ENST00000571272 IL36RNQ9UBH0 155 aa15.02□□□□□ -0.01
SCARF1-205ENST00000571272 COX6A1P12074 109 aa15.01□□□□□ -0.01
SCARF1-205ENST00000571272 SPINK2P20155 84 aa15.01□□□□□ -0.01
SCARF1-205ENST00000571272 BCL3P20749 454 aa15.01□□□□□ -0.01
SCARF1-205ENST00000571272 CCNOP22674 350 aa15.01□□□□□ -0.01
SCARF1-205ENST00000571272 RPS18P62269 152 aaKnown RBP15.01□□□□□ -0.01
SCARF1-205ENST00000571272 OR8B8Q15620 311 aa15.01□□□□□ -0.01
SCARF1-205ENST00000571272 AKR1C8PQ5T2L2 129 aa15.01□□□□□ -0.01
SCARF1-205ENST00000571272 RPS19BP1Q86WX3 136 aaKnown RBP15.01□□□□□ -0.01
SCARF1-205ENST00000571272 IL22RA1Q8N6P7 574 aa15.01□□□□□ -0.01
SCARF1-205ENST00000571272 PARPBPQ9NWS1 579 aa15.01□□□□□ -0.01
SCARF1-205ENST00000571272 FREM1Q5H8C1 2179 aa15.01□□□□□ -0.01
SCARF1-205ENST00000571272 CBR3O75828 277 aa15.01□□□□□ -0.01
SCARF1-205ENST00000571272 JMJD7P0C870 316 aa15.01□□□□□ -0.01
SCARF1-205ENST00000571272 PDZD11Q5EBL8 140 aa15.01□□□□□ -0.01
SCARF1-205ENST00000571272 CPT1CQ8TCG5 803 aa15.01□□□□□ -0.01
SCARF1-205ENST00000571272 NEK7Q8TDX7 302 aa15.01□□□□□ -0.01
SCARF1-205ENST00000571272 SIGLEC12Q96PQ1 595 aa15.01□□□□□ -0.01
SCARF1-205ENST00000571272 PLSCR2Q9NRY7 297 aa15.01□□□□□ -0.01
SCARF1-205ENST00000571272 FAM186AA6NE01 2351 aa15.01□□□□□ -0.01
SCARF1-205ENST00000571272 RPL36A-HNRNPH2H7BZ11 118 aa15□□□□□ -0.01
SCARF1-205ENST00000571272 WRBO00258 174 aa15□□□□□ -0.01
SCARF1-205ENST00000571272 RPL23AP62750 156 aaKnown RBP15□□□□□ -0.01
SCARF1-205ENST00000571272 OR2B11Q5JQS5 317 aa15□□□□□ -0.01
SCARF1-205ENST00000571272 SLC23A3Q6PIS1 610 aa15□□□□□ -0.01
SCARF1-205ENST00000571272 SPNS3Q6ZMD2 512 aa15□□□□□ -0.01
SCARF1-205ENST00000571272 CMTM1Q8IZ96 169 aa15□□□□□ -0.01
SCARF1-205ENST00000571272 FAM185AQ8N0U4 392 aa15□□□□□ -0.01
SCARF1-205ENST00000571272 SNIP1Q8TAD8 396 aaKnown RBP15□□□□□ -0.01
SCARF1-205ENST00000571272 NIPSNAP3BQ9BS92 247 aa15□□□□□ -0.01
SCARF1-205ENST00000571272 KIAA1549Q9HCM3 1950 aa15□□□□□ -0.01
SCARF1-205ENST00000571272 SLC22A20A6NK97 555 aa15□□□□□ -0.01
SCARF1-205ENST00000571272 CDX1P47902 265 aaPredicted RBP15□□□□□ -0.01
SCARF1-205ENST00000571272 HERPUD1Q15011 391 aa15□□□□□ -0.01
SCARF1-205ENST00000571272 WDR5BQ86VZ2 330 aa15□□□□□ -0.01
SCARF1-205ENST00000571272 SF3B5Q9BWJ5 86 aaKnown RBP15□□□□□ -0.01
SCARF1-205ENST00000571272 PHF7Q9BWX1 381 aaPredicted RBP15□□□□□ -0.01
SCARF1-205ENST00000571272 FAM86C1Q9NVL1 165 aa15□□□□□ -0.01
SCARF1-205ENST00000571272 HS3ST3B1Q9Y662 390 aa15□□□□□ -0.01
SCARF1-205ENST00000571272 LOC102723996A0A087X1L8 192 aa14.99□□□□□ -0.01
SCARF1-205ENST00000571272 BTBD17A6NE02 478 aa14.99□□□□□ -0.01
SCARF1-205ENST00000571272 ZNF716A6NP11 495 aa14.99□□□□□ -0.01
SCARF1-205ENST00000571272 CYB5BO43169 146 aa14.99□□□□□ -0.01
SCARF1-205ENST00000571272 ZNF610Q8N9Z0 462 aa14.99□□□□□ -0.01
SCARF1-205ENST00000571272 CRIM1Q9NZV1 1036 aa14.99□□□□□ -0.01
SCARF1-205ENST00000571272 ZNF732B4DXR9 585 aa14.99□□□□□ -0.01
SCARF1-205ENST00000571272 CCL2P13500 99 aa14.99□□□□□ -0.01
SCARF1-205ENST00000571272 S100A2P29034 98 aa14.99□□□□□ -0.01
SCARF1-205ENST00000571272 EPHA8P29322 1005 aaPredicted RBP14.99□□□□□ -0.01
SCARF1-205ENST00000571272 HAAOP46952 286 aa14.99□□□□□ -0.01
SCARF1-205ENST00000571272 ID3Q02535 119 aa14.99□□□□□ -0.01
SCARF1-205ENST00000571272 IZUMO4Q1ZYL8 232 aa14.99□□□□□ -0.01
SCARF1-205ENST00000571272 NMSQ5H8A3 153 aa14.99□□□□□ -0.01
SCARF1-205ENST00000571272 C9orf135Q5VTT2 229 aa14.99□□□□□ -0.01
SCARF1-205ENST00000571272 GNPNAT1Q96EK6 184 aaPredicted RBP14.99□□□□□ -0.01
SCARF1-205ENST00000571272 TVP23CQ96ET8 276 aa14.99□□□□□ -0.01
SCARF1-205ENST00000571272 B3GALT5-AS1P59052 145 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms