RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 HERPUD1Q15011 391 aa15.41■□□□□ 0.06
SMPD3-211ENST00000568373 IAH1Q2TAA2 248 aaPredicted RBP15.41■□□□□ 0.06
SMPD3-211ENST00000568373 SP6Q3SY56 376 aa15.41■□□□□ 0.06
SMPD3-211ENST00000568373 Q6P435 159 aa15.41■□□□□ 0.06
SMPD3-211ENST00000568373 CCDC71LQ8N9Z2 235 aa15.41■□□□□ 0.06
SMPD3-211ENST00000568373 RRNAD1Q96FB5 475 aaKnown RBP15.41■□□□□ 0.06
SMPD3-211ENST00000568373 ARPC5LQ9BPX5 153 aa15.41■□□□□ 0.06
SMPD3-211ENST00000568373 NRIP2Q9BQI9 281 aa15.41■□□□□ 0.06
SMPD3-211ENST00000568373 TUBG2Q9NRH3 451 aa15.41■□□□□ 0.06
SMPD3-211ENST00000568373 OR5AC2Q9NZP5 309 aa15.41■□□□□ 0.06
SMPD3-211ENST00000568373 FAM215AQ9Y5M1 114 aa15.41■□□□□ 0.06
SMPD3-211ENST00000568373 ANKRD11Q6UB99 2663 aaPredicted RBP15.41■□□□□ 0.06
SMPD3-211ENST00000568373 OR5H1A6NKK0 313 aa15.4■□□□□ 0.06
SMPD3-211ENST00000568373 POM121CA8CG34 1229 aa15.4■□□□□ 0.06
SMPD3-211ENST00000568373 CDIPTO14735 213 aa15.4■□□□□ 0.06
SMPD3-211ENST00000568373 DEGS1O15121 323 aa15.4■□□□□ 0.06
SMPD3-211ENST00000568373 BET1O15155 118 aa15.4■□□□□ 0.06
SMPD3-211ENST00000568373 DIRAS3O95661 229 aa15.4■□□□□ 0.06
SMPD3-211ENST00000568373 CTXN2P0C2S0 81 aa15.4■□□□□ 0.06
SMPD3-211ENST00000568373 PGA5P0DJD9 388 aa15.4■□□□□ 0.06
SMPD3-211ENST00000568373 ZNF44P15621 663 aa15.4■□□□□ 0.06
SMPD3-211ENST00000568373 GGNBP1Q5YKI7 109 aa15.4■□□□□ 0.06
SMPD3-211ENST00000568373 C5orf24Q7Z6I8 188 aa15.4■□□□□ 0.06
SMPD3-211ENST00000568373 LRTM2Q8N967 370 aa15.4■□□□□ 0.06
SMPD3-211ENST00000568373 OR11L1Q8NGX0 322 aa15.4■□□□□ 0.06
SMPD3-211ENST00000568373 MRPL24Q96A35 216 aaKnown RBP15.4■□□□□ 0.06
SMPD3-211ENST00000568373 TMEM100Q9NV29 134 aa15.4■□□□□ 0.06
SMPD3-211ENST00000568373 LUZP4Q9P127 313 aa15.4■□□□□ 0.06
SMPD3-211ENST00000568373 PURGQ9UJV8 347 aaKnown RBP15.4■□□□□ 0.06
SMPD3-211ENST00000568373 ARID1AO14497 2285 aa15.4■□□□□ 0.06
SMPD3-211ENST00000568373 H0YL77 283 aa15.4■□□□□ 0.06
SMPD3-211ENST00000568373 EIF2S3LQ2VIR3 472 aaKnown RBP15.4■□□□□ 0.06
SMPD3-211ENST00000568373 RGS7BPQ6MZT1 257 aaPredicted RBP15.4■□□□□ 0.06
SMPD3-211ENST00000568373 C20orf204Q6ZNR8 217 aa15.4■□□□□ 0.06
SMPD3-211ENST00000568373 OR8G5Q8NG78 346 aa15.4■□□□□ 0.06
SMPD3-211ENST00000568373 BCL2L14Q9BZR8 327 aa15.4■□□□□ 0.06
SMPD3-211ENST00000568373 MED9Q9NWA0 146 aa15.4■□□□□ 0.06
SMPD3-211ENST00000568373 AMDHD2Q9Y303 409 aa15.4■□□□□ 0.06
SMPD3-211ENST00000568373 IGHV1-18A0A0C4DH31 117 aa15.39■□□□□ 0.05
SMPD3-211ENST00000568373 F5H0A9 414 aaPredicted RBP15.39■□□□□ 0.05
SMPD3-211ENST00000568373 TOR2AQ5JU69 321 aa15.39■□□□□ 0.05
SMPD3-211ENST00000568373 C1orf185Q5T7R7 199 aa15.39■□□□□ 0.05
SMPD3-211ENST00000568373 ZNF880Q6PDB4 577 aa15.39■□□□□ 0.05
SMPD3-211ENST00000568373 LIAT1Q6ZQX7 453 aa15.39■□□□□ 0.05
SMPD3-211ENST00000568373 FAM169BQ8N8A8 192 aa15.39■□□□□ 0.05
SMPD3-211ENST00000568373 PHYHIPLQ96FC7 376 aa15.39■□□□□ 0.05
SMPD3-211ENST00000568373 CXorf58Q96LI9 332 aa15.39■□□□□ 0.05
SMPD3-211ENST00000568373 TUBD1Q9UJT1 453 aa15.39■□□□□ 0.05
SMPD3-211ENST00000568373 TINAGQ9UJW2 476 aa15.39■□□□□ 0.05
SMPD3-211ENST00000568373 APC2O95996 2303 aa15.39■□□□□ 0.05
SMPD3-211ENST00000568373 IGHV2OR16-5A0A0B4J2B6 119 aa15.39■□□□□ 0.05
SMPD3-211ENST00000568373 IGKV1-6A0A0C4DH72 117 aa15.39■□□□□ 0.05
SMPD3-211ENST00000568373 MKRN2OSH3BPM6 223 aa15.39■□□□□ 0.05
SMPD3-211ENST00000568373 MLNRO43193 412 aa15.39■□□□□ 0.05
SMPD3-211ENST00000568373 TUSC2O75896 110 aa15.39■□□□□ 0.05
SMPD3-211ENST00000568373 GRPP07492 148 aa15.39■□□□□ 0.05
SMPD3-211ENST00000568373 GNRHRP30968 328 aa15.39■□□□□ 0.05
SMPD3-211ENST00000568373 NUP62P37198 522 aaPredicted RBP15.39■□□□□ 0.05
SMPD3-211ENST00000568373 KCNJ3P48549 501 aa15.39■□□□□ 0.05
SMPD3-211ENST00000568373 S100A10P60903 97 aa15.39■□□□□ 0.05
SMPD3-211ENST00000568373 FOXC1Q12948 553 aa15.39■□□□□ 0.05
SMPD3-211ENST00000568373 FAM219AQ8IW50 185 aa15.39■□□□□ 0.05
SMPD3-211ENST00000568373 FAM185AQ8N0U4 392 aa15.39■□□□□ 0.05
SMPD3-211ENST00000568373 GLYATL2Q8WU03 294 aa15.39■□□□□ 0.05
SMPD3-211ENST00000568373 MARVELD3Q96A59 401 aa15.39■□□□□ 0.05
SMPD3-211ENST00000568373 MSI2Q96DH6 328 aaKnown RBP15.39■□□□□ 0.05
SMPD3-211ENST00000568373 SLC25A15Q9Y619 301 aa15.39■□□□□ 0.05
SMPD3-211ENST00000568373 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP15.38■□□□□ 0.05
SMPD3-211ENST00000568373 NXPH2O95156 264 aa15.38■□□□□ 0.05
SMPD3-211ENST00000568373 KITLGP21583 273 aa15.38■□□□□ 0.05
SMPD3-211ENST00000568373 P2RX3P56373 397 aa15.38■□□□□ 0.05
SMPD3-211ENST00000568373 AANATQ16613 207 aa15.38■□□□□ 0.05
SMPD3-211ENST00000568373 PDZD9Q8IXQ8 264 aa15.38■□□□□ 0.05
SMPD3-211ENST00000568373 RPRMLQ8N4K4 120 aa15.38■□□□□ 0.05
SMPD3-211ENST00000568373 OR1S1Q8NH92 325 aa15.38■□□□□ 0.05
SMPD3-211ENST00000568373 AQP10Q96PS8 301 aa15.38■□□□□ 0.05
SMPD3-211ENST00000568373 SLC25A32Q9H2D1 315 aa15.38■□□□□ 0.05
SMPD3-211ENST00000568373 TREM2Q9NZC2 230 aa15.38■□□□□ 0.05
SMPD3-211ENST00000568373 DNAJB11Q9UBS4 358 aa15.38■□□□□ 0.05
SMPD3-211ENST00000568373 IGHV3-64DA0A0J9YX35 117 aa15.37■□□□□ 0.05
SMPD3-211ENST00000568373 hCG_1807616A0A1W2PRN6 198 aa15.37■□□□□ 0.05
SMPD3-211ENST00000568373 MSGN1A6NI15 193 aa15.37■□□□□ 0.05
SMPD3-211ENST00000568373 MPPED1O15442 326 aa15.37■□□□□ 0.05
SMPD3-211ENST00000568373 OR2H2O95918 312 aa15.37■□□□□ 0.05
SMPD3-211ENST00000568373 ACAA1P09110 424 aaPredicted RBP15.37■□□□□ 0.05
SMPD3-211ENST00000568373 TIMP3P35625 211 aa15.37■□□□□ 0.05
SMPD3-211ENST00000568373 MDH2P40926 338 aaKnown RBP15.37■□□□□ 0.05
SMPD3-211ENST00000568373 ZNF146Q15072 292 aa15.37■□□□□ 0.05
SMPD3-211ENST00000568373 KRTCAP3Q53RY4 240 aa15.37■□□□□ 0.05
SMPD3-211ENST00000568373 PAN3Q58A45 887 aaKnown RBP15.37■□□□□ 0.05
SMPD3-211ENST00000568373 LGI3Q8N145 548 aa15.37■□□□□ 0.05
SMPD3-211ENST00000568373 C18orf12Q96KH6 178 aa15.37■□□□□ 0.05
SMPD3-211ENST00000568373 CNTNAP3BQ96NU0 1288 aa15.37■□□□□ 0.05
SMPD3-211ENST00000568373 DMRTA2Q96SC8 542 aa15.37■□□□□ 0.05
SMPD3-211ENST00000568373 CNTNAP3Q9BZ76 1288 aa15.37■□□□□ 0.05
SMPD3-211ENST00000568373 I3L521 148 aa15.37■□□□□ 0.05
SMPD3-211ENST00000568373 SLC33A1O00400 549 aaPredicted RBP15.37■□□□□ 0.05
SMPD3-211ENST00000568373 PHF1O43189 567 aaPredicted RBP15.37■□□□□ 0.05
SMPD3-211ENST00000568373 TIMM8AO60220 97 aaPredicted RBP15.37■□□□□ 0.05
SMPD3-211ENST00000568373 GLI4P10075 376 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms