RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 C17orf58Q2M2W7 97 aa10.08□□□□□ -0.8
SMAD3-208ENST00000558827 TMEM95Q3KNT9 176 aa10.08□□□□□ -0.8
SMAD3-208ENST00000558827 CCDC58Q4VC31 144 aa10.08□□□□□ -0.8
SMAD3-208ENST00000558827 FBLN7Q53RD9 439 aa10.08□□□□□ -0.8
SMAD3-208ENST00000558827 DMKNQ6E0U4 476 aaPredicted RBP10.08□□□□□ -0.8
SMAD3-208ENST00000558827 KLHDC1Q8N7A1 406 aa10.08□□□□□ -0.8
SMAD3-208ENST00000558827 PXT1Q8NFP0 134 aa10.08□□□□□ -0.8
SMAD3-208ENST00000558827 OR4P4Q8NGL7 312 aa10.08□□□□□ -0.8
SMAD3-208ENST00000558827 OR13A1Q8NGR1 328 aa10.08□□□□□ -0.8
SMAD3-208ENST00000558827 RPS4Y2Q8TD47 263 aa10.08□□□□□ -0.8
SMAD3-208ENST00000558827 SGCDQ92629 289 aa10.08□□□□□ -0.8
SMAD3-208ENST00000558827 FOXRED1Q96CU9 486 aaPredicted RBP10.08□□□□□ -0.8
SMAD3-208ENST00000558827 SMIM19Q96E16 107 aa10.08□□□□□ -0.8
SMAD3-208ENST00000558827 OR14A2Q96R54 314 aa10.08□□□□□ -0.8
SMAD3-208ENST00000558827 CDCA4Q9BXL8 241 aa10.08□□□□□ -0.8
SMAD3-208ENST00000558827 FBLN5Q9UBX5 448 aa10.08□□□□□ -0.8
SMAD3-208ENST00000558827 TET2Q6N021 2002 aaPredicted RBP10.07□□□□□ -0.8
SMAD3-208ENST00000558827 A0A1W2PPE3 182 aa10.07□□□□□ -0.8
SMAD3-208ENST00000558827 FUOMA2VDF0 154 aa10.07□□□□□ -0.8
SMAD3-208ENST00000558827 EFCAB10A6NFE3 127 aa10.07□□□□□ -0.8
SMAD3-208ENST00000558827 PTGES3LE9PB15 166 aa10.07□□□□□ -0.8
SMAD3-208ENST00000558827 TOR1AO14656 332 aa10.07□□□□□ -0.8
SMAD3-208ENST00000558827 GEMIN2O14893 280 aaKnown RBP10.07□□□□□ -0.8
SMAD3-208ENST00000558827 TIMM23O14925 209 aa10.07□□□□□ -0.8
SMAD3-208ENST00000558827 OR7C1O76099 320 aaPredicted RBP10.07□□□□□ -0.8
SMAD3-208ENST00000558827 MAS1P04201 325 aa10.07□□□□□ -0.8
SMAD3-208ENST00000558827 RPS11P62280 158 aaKnown RBP eCLIP10.07□□□□□ -0.8
SMAD3-208ENST00000558827 DEFA6Q01524 100 aa10.07□□□□□ -0.8
SMAD3-208ENST00000558827 MED21Q13503 144 aa10.07□□□□□ -0.8
SMAD3-208ENST00000558827 AANATQ16613 207 aa10.07□□□□□ -0.8
SMAD3-208ENST00000558827 SLC22A6Q4U2R8 563 aa10.07□□□□□ -0.8
SMAD3-208ENST00000558827 ARSJQ5FYB0 599 aaPredicted RBP10.07□□□□□ -0.8
SMAD3-208ENST00000558827 ATAD3CQ5T2N8 411 aa10.07□□□□□ -0.8
SMAD3-208ENST00000558827 FAM53AQ6NSI3 398 aaPredicted RBP10.07□□□□□ -0.8
SMAD3-208ENST00000558827 HEPN1Q6WQI6 88 aa10.07□□□□□ -0.8
SMAD3-208ENST00000558827 C1QL4Q86Z23 238 aa10.07□□□□□ -0.8
SMAD3-208ENST00000558827 CHST4Q8NCG5 386 aa10.07□□□□□ -0.8
SMAD3-208ENST00000558827 ZNF485Q8NCK3 441 aa10.07□□□□□ -0.8
SMAD3-208ENST00000558827 OR4D6Q8NGJ1 314 aa10.07□□□□□ -0.8
SMAD3-208ENST00000558827 OR52N1Q8NH53 320 aa10.07□□□□□ -0.8
SMAD3-208ENST00000558827 OR2T6Q8NHC8 308 aa10.07□□□□□ -0.8
SMAD3-208ENST00000558827 MRGPRDQ8TDS7 321 aa10.07□□□□□ -0.8
SMAD3-208ENST00000558827 CCDC107Q8WV48 283 aa10.07□□□□□ -0.8
SMAD3-208ENST00000558827 CORO2AQ92828 525 aa10.07□□□□□ -0.8
SMAD3-208ENST00000558827 MUL1Q969V5 352 aa10.07□□□□□ -0.8
SMAD3-208ENST00000558827 S100A13Q99584 98 aa10.07□□□□□ -0.8
SMAD3-208ENST00000558827 ZNF184Q99676 751 aaPredicted RBP10.07□□□□□ -0.8
SMAD3-208ENST00000558827 NPFFR1Q9GZQ6 430 aa10.07□□□□□ -0.8
SMAD3-208ENST00000558827 METTL9Q9H1A3 318 aa10.07□□□□□ -0.8
SMAD3-208ENST00000558827 GAL3ST2Q9H3Q3 398 aa10.07□□□□□ -0.8
SMAD3-208ENST00000558827 ZNF702PQ9H963 129 aa10.07□□□□□ -0.8
SMAD3-208ENST00000558827 TMEM138Q9NPI0 162 aa10.07□□□□□ -0.8
SMAD3-208ENST00000558827 PSORS1C1Q9UIG5 152 aa10.07□□□□□ -0.8
SMAD3-208ENST00000558827 ST3GAL6Q9Y274 331 aa10.07□□□□□ -0.8
SMAD3-208ENST00000558827 TRBV5-5A0A0J9YX44 114 aa10.06□□□□□ -0.8
SMAD3-208ENST00000558827 VGLL3A8MV65 326 aa10.06□□□□□ -0.8
SMAD3-208ENST00000558827 MYL12BO14950 172 aa10.06□□□□□ -0.8
SMAD3-208ENST00000558827 CASQ2O14958 399 aaPredicted RBP10.06□□□□□ -0.8
SMAD3-208ENST00000558827 PIN1P1O15428 100 aa10.06□□□□□ -0.8
SMAD3-208ENST00000558827 CSTBP04080 98 aaKnown RBP10.06□□□□□ -0.8
SMAD3-208ENST00000558827 IGFBP3P17936 291 aaPredicted RBP10.06□□□□□ -0.8
SMAD3-208ENST00000558827 CELP19835 753 aa10.06□□□□□ -0.8
SMAD3-208ENST00000558827 VHLP40337 213 aa10.06□□□□□ -0.8
SMAD3-208ENST00000558827 GNG10P50151 68 aa10.06□□□□□ -0.8
SMAD3-208ENST00000558827 RIPK1Q13546 671 aa10.06□□□□□ -0.8
SMAD3-208ENST00000558827 INSL4Q14641 139 aa10.06□□□□□ -0.8
SMAD3-208ENST00000558827 NSUN5P1Q3KNT7 163 aa10.06□□□□□ -0.8
SMAD3-208ENST00000558827 MINOS1Q5TGZ0 78 aa10.06□□□□□ -0.8
SMAD3-208ENST00000558827 ELP2Q6IA86 826 aa10.06□□□□□ -0.8
SMAD3-208ENST00000558827 Q6ZTK2 550 aa10.06□□□□□ -0.8
SMAD3-208ENST00000558827 OSR2Q8N2R0 312 aa10.06□□□□□ -0.8
SMAD3-208ENST00000558827 JAGN1Q8N5M9 183 aa10.06□□□□□ -0.8
SMAD3-208ENST00000558827 SUMF2Q8NBJ7 301 aa10.06□□□□□ -0.8
SMAD3-208ENST00000558827 OR51T1Q8NGJ9 327 aa10.06□□□□□ -0.8
SMAD3-208ENST00000558827 HAVCR2Q8TDQ0 301 aa10.06□□□□□ -0.8
SMAD3-208ENST00000558827 NRG4Q8WWG1 115 aa10.06□□□□□ -0.8
SMAD3-208ENST00000558827 PGLYRP3Q96LB9 341 aa10.06□□□□□ -0.8
SMAD3-208ENST00000558827 DPCDQ9BVM2 203 aaPredicted RBP10.06□□□□□ -0.8
SMAD3-208ENST00000558827 RAB18Q9NP72 206 aa10.06□□□□□ -0.8
SMAD3-208ENST00000558827 C8orf4Q9NR00 106 aa10.06□□□□□ -0.8
SMAD3-208ENST00000558827 TAS2R3Q9NYW6 316 aa10.06□□□□□ -0.8
SMAD3-208ENST00000558827 CALYQ9NYX4 217 aa10.06□□□□□ -0.8
SMAD3-208ENST00000558827 DPM3Q9P2X0 92 aa10.06□□□□□ -0.8
SMAD3-208ENST00000558827 MINOS1-NBL1R4GNA1 71 aa10.06□□□□□ -0.8
SMAD3-208ENST00000558827 ERICH4A6NGS2 130 aa10.05□□□□□ -0.8
SMAD3-208ENST00000558827 ZNF729A6NN14 1252 aaPredicted RBP10.05□□□□□ -0.8
SMAD3-208ENST00000558827 ALDOBP05062 364 aa10.05□□□□□ -0.8
SMAD3-208ENST00000558827 CD28P10747 220 aa10.05□□□□□ -0.8
SMAD3-208ENST00000558827 AQP4P55087 323 aa10.05□□□□□ -0.8
SMAD3-208ENST00000558827 IL13RA2Q14627 380 aa10.05□□□□□ -0.8
SMAD3-208ENST00000558827 HERPUD1Q15011 391 aa10.05□□□□□ -0.8
SMAD3-208ENST00000558827 Q499Y3 187 aa10.05□□□□□ -0.8
SMAD3-208ENST00000558827 RSBN1Q5VWQ0 802 aaPredicted RBP10.05□□□□□ -0.8
SMAD3-208ENST00000558827 OR52W1Q6IF63 320 aa10.05□□□□□ -0.8
SMAD3-208ENST00000558827 ASCL4Q6XD76 172 aa10.05□□□□□ -0.8
SMAD3-208ENST00000558827 NEK7Q8TDX7 302 aa10.05□□□□□ -0.8
SMAD3-208ENST00000558827 CPNE2Q96FN4 548 aaPredicted RBP10.05□□□□□ -0.8
SMAD3-208ENST00000558827 KIRREL1Q96J84 757 aa10.05□□□□□ -0.8
SMAD3-208ENST00000558827 BARHL1Q9BZE3 327 aa10.05□□□□□ -0.8
SMAD3-208ENST00000558827 BANF2Q9H503 90 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms