RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 DHRS7BQ6IAN0 325 aaPredicted RBP16.6■□□□□ 0.25
VTI1B-205ENST00000555543 Q6ZSV7 163 aa16.6■□□□□ 0.25
VTI1B-205ENST00000555543 PIFOQ8TCI5 191 aa16.6■□□□□ 0.25
VTI1B-205ENST00000555543 WFDC12Q8WWY7 111 aa16.6■□□□□ 0.25
VTI1B-205ENST00000555543 VCX3BQ9H321 246 aa16.6■□□□□ 0.25
VTI1B-205ENST00000555543 ST3GAL6Q9Y274 331 aa16.6■□□□□ 0.25
VTI1B-205ENST00000555543 TBL2Q9Y4P3 447 aaKnown RBP16.6■□□□□ 0.25
VTI1B-205ENST00000555543 A0A1B0GUS0 222 aa16.59■□□□□ 0.25
VTI1B-205ENST00000555543 CLPSL1A2RUU4 121 aa16.59■□□□□ 0.25
VTI1B-205ENST00000555543 MAS1P04201 325 aa16.59■□□□□ 0.25
VTI1B-205ENST00000555543 CDK2P24941 298 aa16.59■□□□□ 0.25
VTI1B-205ENST00000555543 SRSF4Q08170 494 aaKnown RBP16.59■□□□□ 0.25
VTI1B-205ENST00000555543 AANATQ16613 207 aa16.59■□□□□ 0.25
VTI1B-205ENST00000555543 NHLRC3Q5JS37 347 aa16.59■□□□□ 0.25
VTI1B-205ENST00000555543 LYPD6Q86Y78 171 aa16.59■□□□□ 0.25
VTI1B-205ENST00000555543 OSR2Q8N2R0 312 aa16.59■□□□□ 0.25
VTI1B-205ENST00000555543 JAGN1Q8N5M9 183 aa16.59■□□□□ 0.25
VTI1B-205ENST00000555543 LINC01006Q8NI28 216 aa16.59■□□□□ 0.25
VTI1B-205ENST00000555543 PLPPR1Q8TBJ4 325 aa16.59■□□□□ 0.25
VTI1B-205ENST00000555543 MUL1Q969V5 352 aa16.59■□□□□ 0.25
VTI1B-205ENST00000555543 GAL3ST2Q9H3Q3 398 aa16.59■□□□□ 0.25
VTI1B-205ENST00000555543 DUSP21Q9H596 190 aa16.59■□□□□ 0.25
VTI1B-205ENST00000555543 TAS2R3Q9NYW6 316 aa16.59■□□□□ 0.25
VTI1B-205ENST00000555543 KIF25Q9UIL4 384 aa16.59■□□□□ 0.25
VTI1B-205ENST00000555543 FOXJ3Q9UPW0 622 aa16.59■□□□□ 0.25
VTI1B-205ENST00000555543 MEGF11A6BM72 1044 aa16.58■□□□□ 0.24
VTI1B-205ENST00000555543 FAM172BPA6NC97 362 aa16.58■□□□□ 0.24
VTI1B-205ENST00000555543 GEMIN2O14893 280 aaKnown RBP16.58■□□□□ 0.24
VTI1B-205ENST00000555543 JUNBP17275 347 aaPredicted RBP16.58■□□□□ 0.24
VTI1B-205ENST00000555543 GP2P55259 537 aaKnown RBP16.58■□□□□ 0.24
VTI1B-205ENST00000555543 SPHARQ15513 63 aa16.58■□□□□ 0.24
VTI1B-205ENST00000555543 SLC22A6Q4U2R8 563 aa16.58■□□□□ 0.24
VTI1B-205ENST00000555543 UTF1Q5T230 341 aa16.58■□□□□ 0.24
VTI1B-205ENST00000555543 FAM27D1Q5T7N8 215 aa16.58■□□□□ 0.24
VTI1B-205ENST00000555543 HEPN1Q6WQI6 88 aa16.58■□□□□ 0.24
VTI1B-205ENST00000555543 CLEC7AQ9BXN2 247 aa16.58■□□□□ 0.24
VTI1B-205ENST00000555543 SLITRK2Q9H156 845 aa16.58■□□□□ 0.24
VTI1B-205ENST00000555543 MRPS28Q9Y2Q9 187 aaKnown RBP16.58■□□□□ 0.24
VTI1B-205ENST00000555543 TPRKBQ9Y3C4 175 aa16.58■□□□□ 0.24
VTI1B-205ENST00000555543 MGAM2Q2M2H8 2515 aa16.57■□□□□ 0.24
VTI1B-205ENST00000555543 VGLL3A8MV65 326 aa16.57■□□□□ 0.24
VTI1B-205ENST00000555543 CSTBP04080 98 aaKnown RBP16.57■□□□□ 0.24
VTI1B-205ENST00000555543 CRHBPP24387 322 aa16.57■□□□□ 0.24
VTI1B-205ENST00000555543 VHLP40337 213 aa16.57■□□□□ 0.24
VTI1B-205ENST00000555543 GLP1RP43220 463 aa16.57■□□□□ 0.24
VTI1B-205ENST00000555543 MED22Q15528 200 aa16.57■□□□□ 0.24
VTI1B-205ENST00000555543 SSX2Q16385 188 aa16.57■□□□□ 0.24
VTI1B-205ENST00000555543 C17orf58Q2M2W7 97 aa16.57■□□□□ 0.24
VTI1B-205ENST00000555543 RSBN1Q5VWQ0 802 aaPredicted RBP16.57■□□□□ 0.24
VTI1B-205ENST00000555543 SUMF2Q8NBJ7 301 aa16.57■□□□□ 0.24
VTI1B-205ENST00000555543 OR4D6Q8NGJ1 314 aa16.57■□□□□ 0.24
VTI1B-205ENST00000555543 OR4P4Q8NGL7 312 aa16.57■□□□□ 0.24
VTI1B-205ENST00000555543 OR13A1Q8NGR1 328 aa16.57■□□□□ 0.24
VTI1B-205ENST00000555543 FOXRED1Q96CU9 486 aaPredicted RBP16.57■□□□□ 0.24
VTI1B-205ENST00000555543 S100A13Q99584 98 aa16.57■□□□□ 0.24
VTI1B-205ENST00000555543 TMED9Q9BVK6 235 aa16.57■□□□□ 0.24
VTI1B-205ENST00000555543 DPCDQ9BVM2 203 aaPredicted RBP16.57■□□□□ 0.24
VTI1B-205ENST00000555543 IFT22Q9H7X7 185 aa16.57■□□□□ 0.24
VTI1B-205ENST00000555543 MEIKINA0A087WXM9 373 aa16.56■□□□□ 0.24
VTI1B-205ENST00000555543 CHST1O43916 411 aa16.56■□□□□ 0.24
VTI1B-205ENST00000555543 OR7C1O76099 320 aaPredicted RBP16.56■□□□□ 0.24
VTI1B-205ENST00000555543 CGB3P0DN86 165 aa16.56■□□□□ 0.24
VTI1B-205ENST00000555543 CGB7P0DN87 165 aa16.56■□□□□ 0.24
VTI1B-205ENST00000555543 MAPK3P27361 379 aaPredicted RBP16.56■□□□□ 0.24
VTI1B-205ENST00000555543 HSPA13P48723 471 aa16.56■□□□□ 0.24
VTI1B-205ENST00000555543 RAB13P51153 203 aa16.56■□□□□ 0.24
VTI1B-205ENST00000555543 KRTAP10-3P60369 221 aa16.56■□□□□ 0.24
VTI1B-205ENST00000555543 PAX5Q02548 391 aa16.56■□□□□ 0.24
VTI1B-205ENST00000555543 FAM189A2Q15884 450 aa16.56■□□□□ 0.24
VTI1B-205ENST00000555543 ACSM3Q53FZ2 586 aa16.56■□□□□ 0.24
VTI1B-205ENST00000555543 GLIPR1L1Q6UWM5 242 aa16.56■□□□□ 0.24
VTI1B-205ENST00000555543 UNQ9370/PRO34162Q6UXP9 181 aa16.56■□□□□ 0.24
VTI1B-205ENST00000555543 SGMS2Q8NHU3 365 aa16.56■□□□□ 0.24
VTI1B-205ENST00000555543 MALSU1Q96EH3 234 aa16.56■□□□□ 0.24
VTI1B-205ENST00000555543 ZNF286AQ9HBT8 521 aa16.56■□□□□ 0.24
VTI1B-205ENST00000555543 OR6C3Q9NZP0 311 aa16.56■□□□□ 0.24
VTI1B-205ENST00000555543 RNF114Q9Y508 228 aa16.56■□□□□ 0.24
VTI1B-205ENST00000555543 HILPDAQ9Y5L2 63 aa16.56■□□□□ 0.24
VTI1B-205ENST00000555543 ZNF729A6NN14 1252 aaPredicted RBP16.55■□□□□ 0.24
VTI1B-205ENST00000555543 RGS10O43665 173 aa16.55■□□□□ 0.24
VTI1B-205ENST00000555543 ZNF780AO75290 641 aaPredicted RBP16.55■□□□□ 0.24
VTI1B-205ENST00000555543 TSPAN9O75954 239 aa16.55■□□□□ 0.24
VTI1B-205ENST00000555543 PROK1P58294 105 aa16.55■□□□□ 0.24
VTI1B-205ENST00000555543 MINOS1Q5TGZ0 78 aa16.55■□□□□ 0.24
VTI1B-205ENST00000555543 LIPKQ5VXJ0 399 aa16.55■□□□□ 0.24
VTI1B-205ENST00000555543 ABHD12Q8N2K0 398 aa16.55■□□□□ 0.24
VTI1B-205ENST00000555543 MS4A15Q8N5U1 240 aa16.55■□□□□ 0.24
VTI1B-205ENST00000555543 THRSPQ92748 146 aa16.55■□□□□ 0.24
VTI1B-205ENST00000555543 CNBD2Q96M20 576 aa16.55■□□□□ 0.24
VTI1B-205ENST00000555543 C16orf95Q9H693 158 aa16.55■□□□□ 0.24
VTI1B-205ENST00000555543 MINOS1-NBL1R4GNA1 71 aa16.55■□□□□ 0.24
VTI1B-205ENST00000555543 TRAV39A0A0B4J263 110 aa16.54■□□□□ 0.24
VTI1B-205ENST00000555543 KBTBD11-OT1A0A1B0GTJ5 212 aa16.54■□□□□ 0.24
VTI1B-205ENST00000555543 SC5DO75845 299 aa16.54■□□□□ 0.24
VTI1B-205ENST00000555543 GTF2F2P13984 249 aa16.54■□□□□ 0.24
VTI1B-205ENST00000555543 CD34P28906 385 aa16.54■□□□□ 0.24
VTI1B-205ENST00000555543 KCNJ3P48549 501 aa16.54■□□□□ 0.24
VTI1B-205ENST00000555543 MPV17LQ2QL34 196 aa16.54■□□□□ 0.24
VTI1B-205ENST00000555543 AWAT2Q6E213 333 aa16.54■□□□□ 0.24
VTI1B-205ENST00000555543 SLC35E4Q6ICL7 350 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms