RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 NKX2-1P43699 371 aaPredicted RBP11.77□□□□□ -0.53
PRPF40B-209ENST00000548825 ARG2P78540 354 aa11.77□□□□□ -0.53
PRPF40B-209ENST00000548825 OR2M7Q8NG81 312 aa11.77□□□□□ -0.53
PRPF40B-209ENST00000548825 IP6K3Q96PC2 410 aa11.77□□□□□ -0.53
PRPF40B-209ENST00000548825 CLCC1Q96S66 551 aa11.77□□□□□ -0.53
PRPF40B-209ENST00000548825 RSRP1Q9BUV0 290 aa11.77□□□□□ -0.53
PRPF40B-209ENST00000548825 WFDC1Q9HC57 220 aa11.77□□□□□ -0.53
PRPF40B-209ENST00000548825 FBLN5Q9UBX5 448 aa11.77□□□□□ -0.53
PRPF40B-209ENST00000548825 IGKV1D-13A0A0B4J2D9 117 aa11.76□□□□□ -0.53
PRPF40B-209ENST00000548825 C3orf85A0A1B0GTC6 90 aa11.76□□□□□ -0.53
PRPF40B-209ENST00000548825 NTN3O00634 580 aaPredicted RBP11.76□□□□□ -0.53
PRPF40B-209ENST00000548825 CST4P01036 141 aa11.76□□□□□ -0.53
PRPF40B-209ENST00000548825 SERPINA7P05543 415 aa11.76□□□□□ -0.53
PRPF40B-209ENST00000548825 CRYBA1P05813 215 aa11.76□□□□□ -0.53
PRPF40B-209ENST00000548825 FBP1P09467 338 aa11.76□□□□□ -0.53
PRPF40B-209ENST00000548825 IGKV1-13P0DP09 117 aa11.76□□□□□ -0.53
PRPF40B-209ENST00000548825 PPP1CCP36873 323 aaKnown RBP11.76□□□□□ -0.53
PRPF40B-209ENST00000548825 CEBPDP49716 269 aaPredicted RBP11.76□□□□□ -0.53
PRPF40B-209ENST00000548825 ERVS71-1P61550 626 aa11.76□□□□□ -0.53
PRPF40B-209ENST00000548825 DPPA2Q7Z7J5 298 aa11.76□□□□□ -0.53
PRPF40B-209ENST00000548825 OR2G3Q8NGZ4 309 aa11.76□□□□□ -0.53
PRPF40B-209ENST00000548825 AQP10Q96PS8 301 aa11.76□□□□□ -0.53
PRPF40B-209ENST00000548825 PLA2G2EQ9NZK7 142 aa11.76□□□□□ -0.53
PRPF40B-209ENST00000548825 ERRFI1Q9UJM3 462 aaPredicted RBP11.76□□□□□ -0.53
PRPF40B-209ENST00000548825 AKAP6Q13023 2319 aa11.76□□□□□ -0.53
PRPF40B-209ENST00000548825 HMGB3O15347 200 aaKnown RBP11.76□□□□□ -0.53
PRPF40B-209ENST00000548825 JTBO76095 146 aa11.76□□□□□ -0.53
PRPF40B-209ENST00000548825 OTX1P32242 354 aaPredicted RBP11.76□□□□□ -0.53
PRPF40B-209ENST00000548825 UBALD2Q8IYN6 164 aa11.76□□□□□ -0.53
PRPF40B-209ENST00000548825 KCNE4Q8WWG9 221 aa11.76□□□□□ -0.53
PRPF40B-209ENST00000548825 FAM212BQ9NTI7 297 aaPredicted RBP11.76□□□□□ -0.53
PRPF40B-209ENST00000548825 C9orf172C9J069 976 aa11.76□□□□□ -0.53
PRPF40B-209ENST00000548825 TMEM267Q0VDI3 215 aaPredicted RBP11.76□□□□□ -0.53
PRPF40B-209ENST00000548825 MST1LQ2TV78 715 aa11.76□□□□□ -0.53
PRPF40B-209ENST00000548825 LIAT1Q6ZQX7 453 aa11.76□□□□□ -0.53
PRPF40B-209ENST00000548825 ZNF818PQ6ZRF7 136 aa11.76□□□□□ -0.53
PRPF40B-209ENST00000548825 ZDHHC23Q8IYP9 409 aa11.76□□□□□ -0.53
PRPF40B-209ENST00000548825 TMEM251Q8N6I4 163 aa11.76□□□□□ -0.53
PRPF40B-209ENST00000548825 OR1K1Q8NGR3 316 aa11.76□□□□□ -0.53
PRPF40B-209ENST00000548825 RXFP4Q8TDU9 374 aa11.76□□□□□ -0.53
PRPF40B-209ENST00000548825 ADAMTS17Q8TE56 1095 aa11.76□□□□□ -0.53
PRPF40B-209ENST00000548825 RNF138Q8WVD3 245 aa11.76□□□□□ -0.53
PRPF40B-209ENST00000548825 INTS12Q96CB8 462 aaKnown RBP11.76□□□□□ -0.53
PRPF40B-209ENST00000548825 RARRES2Q99969 163 aa11.76□□□□□ -0.53
PRPF40B-209ENST00000548825 TM2D1Q9BX74 207 aa11.76□□□□□ -0.53
PRPF40B-209ENST00000548825 TTTY12Q9BZ98 90 aa11.76□□□□□ -0.53
PRPF40B-209ENST00000548825 LIPGQ9Y5X9 500 aa11.76□□□□□ -0.53
PRPF40B-209ENST00000548825 NCKAP5O14513 1909 aa11.75□□□□□ -0.53
PRPF40B-209ENST00000548825 EXPH5Q8NEV8 1989 aa11.75□□□□□ -0.53
PRPF40B-209ENST00000548825 TUSC2O75896 110 aa11.75□□□□□ -0.53
PRPF40B-209ENST00000548825 SERPINE2P07093 398 aa11.75□□□□□ -0.53
PRPF40B-209ENST00000548825 APLNRP35414 380 aa11.75□□□□□ -0.53
PRPF40B-209ENST00000548825 CLN3Q13286 438 aa11.75□□□□□ -0.53
PRPF40B-209ENST00000548825 TMEM187Q14656 261 aa11.75□□□□□ -0.53
PRPF40B-209ENST00000548825 SSPNQ14714 243 aa11.75□□□□□ -0.53
PRPF40B-209ENST00000548825 ALKBH6Q3KRA9 238 aa11.75□□□□□ -0.53
PRPF40B-209ENST00000548825 AIFM2Q9BRQ8 373 aa11.75□□□□□ -0.53
PRPF40B-209ENST00000548825 MTCH1Q9NZJ7 389 aa11.75□□□□□ -0.53
PRPF40B-209ENST00000548825 PURGQ9UJV8 347 aaKnown RBP11.75□□□□□ -0.53
PRPF40B-209ENST00000548825 hCG_1809904A0A1W2PP81 198 aa11.75□□□□□ -0.53
PRPF40B-209ENST00000548825 A0A1W2PR64 198 aa11.75□□□□□ -0.53
PRPF40B-209ENST00000548825 A0A1W2PRV1 198 aa11.75□□□□□ -0.53
PRPF40B-209ENST00000548825 RAB19A4D1S5 217 aa11.75□□□□□ -0.53
PRPF40B-209ENST00000548825 ANKRD30BLA7E2S9 258 aa11.75□□□□□ -0.53
PRPF40B-209ENST00000548825 E5RGE8 158 aa11.75□□□□□ -0.53
PRPF40B-209ENST00000548825 SLC34A2O95436 690 aa11.75□□□□□ -0.53
PRPF40B-209ENST00000548825 ZNF806P0C7X5 589 aa11.75□□□□□ -0.53
PRPF40B-209ENST00000548825 PLA2G5P39877 138 aa11.75□□□□□ -0.53
PRPF40B-209ENST00000548825 BEND4Q6ZU67 534 aa11.75□□□□□ -0.53
PRPF40B-209ENST00000548825 ZNF808Q8N4W9 903 aaPredicted RBP11.75□□□□□ -0.53
PRPF40B-209ENST00000548825 TPRX1Q8N7U7 411 aa11.75□□□□□ -0.53
PRPF40B-209ENST00000548825 OR5C1Q8NGR4 320 aa11.75□□□□□ -0.53
PRPF40B-209ENST00000548825 SFT2D1Q8WV19 159 aa11.75□□□□□ -0.53
PRPF40B-209ENST00000548825 SF3B5Q9BWJ5 86 aaKnown RBP11.75□□□□□ -0.53
PRPF40B-209ENST00000548825 LUZP4Q9P127 313 aa11.75□□□□□ -0.53
PRPF40B-209ENST00000548825 ABI3Q9P2A4 366 aa11.75□□□□□ -0.53
PRPF40B-209ENST00000548825 NSG2Q9Y328 171 aa11.75□□□□□ -0.53
PRPF40B-209ENST00000548825 MPPED1O15442 326 aa11.75□□□□□ -0.53
PRPF40B-209ENST00000548825 CTRB1P17538 263 aa11.75□□□□□ -0.53
PRPF40B-209ENST00000548825 CTSSP25774 331 aa11.75□□□□□ -0.53
PRPF40B-209ENST00000548825 CCL11P51671 97 aa11.75□□□□□ -0.53
PRPF40B-209ENST00000548825 ZNF154Q13106 437 aa11.75□□□□□ -0.53
PRPF40B-209ENST00000548825 CTRB2Q6GPI1 263 aa11.75□□□□□ -0.53
PRPF40B-209ENST00000548825 FAM53AQ6NSI3 398 aaPredicted RBP11.75□□□□□ -0.53
PRPF40B-209ENST00000548825 CCDC71LQ8N9Z2 235 aa11.75□□□□□ -0.53
PRPF40B-209ENST00000548825 SSC4DQ8WTU2 575 aa11.75□□□□□ -0.53
PRPF40B-209ENST00000548825 NTNG2Q96CW9 530 aa11.75□□□□□ -0.53
PRPF40B-209ENST00000548825 CD300LBA8K4G0 201 aa11.74□□□□□ -0.53
PRPF40B-209ENST00000548825 PROB1E7EW31 1015 aa11.74□□□□□ -0.53
PRPF40B-209ENST00000548825 CELA3BP08861 270 aa11.74□□□□□ -0.53
PRPF40B-209ENST00000548825 RD3LP0DJH9 198 aa11.74□□□□□ -0.53
PRPF40B-209ENST00000548825 SRSF6Q13247 344 aaKnown RBP11.74□□□□□ -0.53
PRPF40B-209ENST00000548825 GUK1Q16774 197 aa11.74□□□□□ -0.53
PRPF40B-209ENST00000548825 SPINK9Q5DT21 86 aa11.74□□□□□ -0.53
PRPF40B-209ENST00000548825 DCAF10Q5QP82 559 aa11.74□□□□□ -0.53
PRPF40B-209ENST00000548825 Q6ZPA2 131 aa11.74□□□□□ -0.53
PRPF40B-209ENST00000548825 FAM24BQ8N5W8 94 aa11.74□□□□□ -0.53
PRPF40B-209ENST00000548825 GUCD1Q96NT3 240 aa11.74□□□□□ -0.53
PRPF40B-209ENST00000548825 KCNJ16Q9NPI9 418 aa11.74□□□□□ -0.53
PRPF40B-209ENST00000548825 TRAPPC2LQ9UL33 140 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 107.8 ms