RNA–Protein interactions for RNA: ENST00000548436.5

PRPF40B-208, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 2,059 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-208ENST00000548436 MEX3BQ6ZN04 569 aaKnown RBP15.81■□□□□ 0.12
PRPF40B-208ENST00000548436 P4HA3Q7Z4N8 544 aa15.81■□□□□ 0.12
PRPF40B-208ENST00000548436 SLC35G3Q8N808 338 aa15.81■□□□□ 0.12
PRPF40B-208ENST00000548436 SECTM1Q8WVN6 248 aa15.81■□□□□ 0.12
PRPF40B-208ENST00000548436 ARL11Q969Q4 196 aa15.81■□□□□ 0.12
PRPF40B-208ENST00000548436 ERGIC1Q969X5 290 aa15.81■□□□□ 0.12
PRPF40B-208ENST00000548436 LRRC46Q96FV0 321 aa15.81■□□□□ 0.12
PRPF40B-208ENST00000548436 BSCL2Q96G97 398 aaPredicted RBP15.81■□□□□ 0.12
PRPF40B-208ENST00000548436 OR51I2Q9H344 312 aa15.81■□□□□ 0.12
PRPF40B-208ENST00000548436 TRAV24A0A0B4J272 114 aa15.8■□□□□ 0.12
PRPF40B-208ENST00000548436 IGKV1D-13A0A0B4J2D9 117 aa15.8■□□□□ 0.12
PRPF40B-208ENST00000548436 TRDCB7Z8K6 153 aa15.8■□□□□ 0.12
PRPF40B-208ENST00000548436 E5RGE8 158 aa15.8■□□□□ 0.12
PRPF40B-208ENST00000548436 HS3ST1O14792 307 aa15.8■□□□□ 0.12
PRPF40B-208ENST00000548436 TSPAN4O14817 238 aa15.8■□□□□ 0.12
PRPF40B-208ENST00000548436 IGKV1-13P0DP09 117 aa15.8■□□□□ 0.12
PRPF40B-208ENST00000548436 IGHV1-2P23083 117 aa15.8■□□□□ 0.12
PRPF40B-208ENST00000548436 DEFA5Q01523 94 aa15.8■□□□□ 0.12
PRPF40B-208ENST00000548436 IL24Q13007 206 aa15.8■□□□□ 0.12
PRPF40B-208ENST00000548436 ZNF818PQ6ZRF7 136 aa15.8■□□□□ 0.12
PRPF40B-208ENST00000548436 GCNT2Q8N0V5 402 aa15.8■□□□□ 0.12
PRPF40B-208ENST00000548436 OR4A4PQ8NGN8 299 aa15.8■□□□□ 0.12
PRPF40B-208ENST00000548436 MRPL30Q8TCC3 161 aaKnown RBP15.8■□□□□ 0.12
PRPF40B-208ENST00000548436 PLK3Q9H4B4 646 aa15.8■□□□□ 0.12
PRPF40B-208ENST00000548436 PLEKHA2Q9HB19 425 aa15.8■□□□□ 0.12
PRPF40B-208ENST00000548436 PLA2G2EQ9NZK7 142 aa15.8■□□□□ 0.12
PRPF40B-208ENST00000548436 NSG2Q9Y328 171 aa15.8■□□□□ 0.12
PRPF40B-208ENST00000548436 ATP23Q9Y6H3 246 aa15.8■□□□□ 0.12
PRPF40B-208ENST00000548436 OTOGLQ3ZCN5 2332 aa15.8■□□□□ 0.12
PRPF40B-208ENST00000548436 WT1P19544 449 aaPredicted RBP15.8■□□□□ 0.12
PRPF40B-208ENST00000548436 EIF5AP63241 154 aaKnown RBP15.8■□□□□ 0.12
PRPF40B-208ENST00000548436 TAGLNQ01995 201 aaKnown RBP15.8■□□□□ 0.12
PRPF40B-208ENST00000548436 TBC1D28Q2M2D7 210 aa15.8■□□□□ 0.12
PRPF40B-208ENST00000548436 LINC00596Q86U02 117 aa15.8■□□□□ 0.12
PRPF40B-208ENST00000548436 TBC1D26Q86UD7 250 aa15.8■□□□□ 0.12
PRPF40B-208ENST00000548436 FAM58AQ8N1B3 248 aa15.8■□□□□ 0.12
PRPF40B-208ENST00000548436 RDH5Q92781 318 aa15.8■□□□□ 0.12
PRPF40B-208ENST00000548436 SMIM8Q96KF7 97 aa15.8■□□□□ 0.12
PRPF40B-208ENST00000548436 GPHA2Q96T91 129 aa15.8■□□□□ 0.12
PRPF40B-208ENST00000548436 USB1Q9BQ65 265 aaKnown RBP15.8■□□□□ 0.12
PRPF40B-208ENST00000548436 ASCL3Q9NQ33 180 aa15.8■□□□□ 0.12
PRPF40B-208ENST00000548436 CLCF1Q9UBD9 225 aa15.8■□□□□ 0.12
PRPF40B-208ENST00000548436 FBXO9Q9UK97 447 aaPredicted RBP15.8■□□□□ 0.12
PRPF40B-208ENST00000548436 ZDHHC8Q9ULC8 765 aa15.8■□□□□ 0.12
PRPF40B-208ENST00000548436 TMEM218A2RU14 115 aa15.79■□□□□ 0.12
PRPF40B-208ENST00000548436 ABCD4O14678 606 aa15.79■□□□□ 0.12
PRPF40B-208ENST00000548436 NUPL2O15504 423 aaKnown RBP15.79■□□□□ 0.12
PRPF40B-208ENST00000548436 TUSC2O75896 110 aa15.79■□□□□ 0.12
PRPF40B-208ENST00000548436 GAPDHP04406 335 aaKnown RBP15.79■□□□□ 0.12
PRPF40B-208ENST00000548436 SPIN3Q5JUX0 258 aa15.79■□□□□ 0.12
PRPF40B-208ENST00000548436 FBXW12Q6X9E4 464 aa15.79■□□□□ 0.12
PRPF40B-208ENST00000548436 FAM185AQ8N0U4 392 aa15.79■□□□□ 0.12
PRPF40B-208ENST00000548436 PKIBQ9C010 78 aa15.79■□□□□ 0.12
PRPF40B-208ENST00000548436 TMEM222Q9H0R3 208 aa15.79■□□□□ 0.12
PRPF40B-208ENST00000548436 MMP26Q9NRE1 261 aa15.79■□□□□ 0.12
PRPF40B-208ENST00000548436 TMED3Q9Y3Q3 217 aa15.79■□□□□ 0.12
PRPF40B-208ENST00000548436 SPENQ96T58 3664 aaKnown RBP15.79■□□□□ 0.12
PRPF40B-208ENST00000548436 KIR2DS1A0A191URI9 304 aa15.79■□□□□ 0.12
PRPF40B-208ENST00000548436 DLL1O00548 723 aa15.79■□□□□ 0.12
PRPF40B-208ENST00000548436 FBXO24O75426 580 aa15.79■□□□□ 0.12
PRPF40B-208ENST00000548436 IGHG3P01860 377 aa15.79■□□□□ 0.12
PRPF40B-208ENST00000548436 KIR2DS4P43632 304 aa15.79■□□□□ 0.12
PRPF40B-208ENST00000548436 ERVS71-1P61550 626 aa15.79■□□□□ 0.12
PRPF40B-208ENST00000548436 ZNF273Q14593 569 aa15.79■□□□□ 0.12
PRPF40B-208ENST00000548436 KIR2DS1Q14954 304 aa15.79■□□□□ 0.12
PRPF40B-208ENST00000548436 WDR86Q86TI4 376 aa15.79■□□□□ 0.12
PRPF40B-208ENST00000548436 GAPTQ8N292 157 aa15.79■□□□□ 0.12
PRPF40B-208ENST00000548436 SPACA1Q9HBV2 294 aa15.79■□□□□ 0.12
PRPF40B-208ENST00000548436 SMPD2O60906 423 aa15.78■□□□□ 0.12
PRPF40B-208ENST00000548436 LYZL6O75951 148 aa15.78■□□□□ 0.12
PRPF40B-208ENST00000548436 JTBO76095 146 aa15.78■□□□□ 0.12
PRPF40B-208ENST00000548436 ADCYAP1P18509 176 aa15.78■□□□□ 0.12
PRPF40B-208ENST00000548436 LPAR6P43657 344 aa15.78■□□□□ 0.12
PRPF40B-208ENST00000548436 IDH3GP51553 393 aaPredicted RBP15.78■□□□□ 0.12
PRPF40B-208ENST00000548436 IL13RA2Q14627 380 aa15.78■□□□□ 0.12
PRPF40B-208ENST00000548436 ZNF565Q8N9K5 539 aa15.78■□□□□ 0.12
PRPF40B-208ENST00000548436 OR4D5Q8NGN0 318 aa15.78■□□□□ 0.12
PRPF40B-208ENST00000548436 GTF3AQ92664 365 aaKnown RBP15.78■□□□□ 0.12
PRPF40B-208ENST00000548436 SAT2Q96F10 170 aaPredicted RBP15.78■□□□□ 0.12
PRPF40B-208ENST00000548436 OR2J1Q9GZK6 312 aa15.78■□□□□ 0.12
PRPF40B-208ENST00000548436 GPR31O00270 319 aa15.77■□□□□ 0.12
PRPF40B-208ENST00000548436 GLAP06280 429 aa15.77■□□□□ 0.12
PRPF40B-208ENST00000548436 SULT1A2P50226 295 aa15.77■□□□□ 0.12
PRPF40B-208ENST00000548436 RND3P61587 244 aa15.77■□□□□ 0.12
PRPF40B-208ENST00000548436 EIF5AL1Q6IS14 154 aaKnown RBP15.77■□□□□ 0.12
PRPF40B-208ENST00000548436 PCSK4Q6UW60 755 aa15.77■□□□□ 0.12
PRPF40B-208ENST00000548436 DMBX1Q8NFW5 382 aa15.77■□□□□ 0.12
PRPF40B-208ENST00000548436 TRIB1Q96RU8 372 aa15.77■□□□□ 0.12
PRPF40B-208ENST00000548436 HRH4Q9H3N8 390 aa15.77■□□□□ 0.12
PRPF40B-208ENST00000548436 CCL28Q9NRJ3 127 aa15.77■□□□□ 0.12
PRPF40B-208ENST00000548436 DLL3Q9NYJ7 618 aa15.77■□□□□ 0.12
PRPF40B-208ENST00000548436 EP300Q09472 2414 aaPredicted RBP15.77■□□□□ 0.11
PRPF40B-208ENST00000548436 NKX2-6A6NCS4 301 aa15.77■□□□□ 0.11
PRPF40B-208ENST00000548436 NUDT19A8MXV4 375 aa15.77■□□□□ 0.11
PRPF40B-208ENST00000548436 J3QT63 122 aa15.77■□□□□ 0.11
PRPF40B-208ENST00000548436 HSD17B6O14756 317 aa15.77■□□□□ 0.11
PRPF40B-208ENST00000548436 ST8SIA3O43173 380 aa15.77■□□□□ 0.11
PRPF40B-208ENST00000548436 MED6O75586 246 aa15.77■□□□□ 0.11
PRPF40B-208ENST00000548436 PPP1CBP62140 327 aa15.77■□□□□ 0.11
PRPF40B-208ENST00000548436 TMEM56Q96MV1 263 aa15.77■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms