RNA–Protein interactions for RNA: ENST00000542367.1

CCND1-205, Transcript of cyclin D1, humanhuman

TSL 1 (best)

Gene CCND1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-205ENST00000542367 ZNF702PQ9H963 129 aa13.21□□□□□ -0.29
CCND1-205ENST00000542367 TMEM138Q9NPI0 162 aa13.21□□□□□ -0.29
CCND1-205ENST00000542367 OR6C3Q9NZP0 311 aa13.21□□□□□ -0.29
CCND1-205ENST00000542367 DPM3Q9P2X0 92 aa13.21□□□□□ -0.29
CCND1-205ENST00000542367 ING4Q9UNL4 249 aa13.21□□□□□ -0.29
CCND1-205ENST00000542367 ZNF729A6NN14 1252 aaPredicted RBP13.2□□□□□ -0.3
CCND1-205ENST00000542367 ANKRD65E5RJM6 399 aa13.2□□□□□ -0.3
CCND1-205ENST00000542367 CDRT1O95170 752 aa13.2□□□□□ -0.3
CCND1-205ENST00000542367 IGLV1-47P01700 117 aa13.2□□□□□ -0.3
CCND1-205ENST00000542367 VSIG10L2P0DP72 767 aa13.2□□□□□ -0.3
CCND1-205ENST00000542367 BDKRB2P30411 391 aa13.2□□□□□ -0.3
CCND1-205ENST00000542367 ZNF93P35789 620 aaPredicted RBP13.2□□□□□ -0.3
CCND1-205ENST00000542367 BDH1Q02338 343 aa13.2□□□□□ -0.3
CCND1-205ENST00000542367 HABP2Q14520 560 aaPredicted RBP13.2□□□□□ -0.3
CCND1-205ENST00000542367 C2orf68Q2NKX9 166 aa13.2□□□□□ -0.3
CCND1-205ENST00000542367 OGFRL1Q5TC84 451 aaPredicted RBP13.2□□□□□ -0.3
CCND1-205ENST00000542367 DDI2Q5TDH0 399 aa13.2□□□□□ -0.3
CCND1-205ENST00000542367 DMKNQ6E0U4 476 aaPredicted RBP13.2□□□□□ -0.3
CCND1-205ENST00000542367 C8orf59Q8N0T1 100 aaPredicted RBP13.2□□□□□ -0.3
CCND1-205ENST00000542367 ZFP41Q8N8Y5 198 aa13.2□□□□□ -0.3
CCND1-205ENST00000542367 ZNF565Q8N9K5 539 aa13.2□□□□□ -0.3
CCND1-205ENST00000542367 ZNF485Q8NCK3 441 aa13.2□□□□□ -0.3
CCND1-205ENST00000542367 FAM110DQ8TAY7 271 aaPredicted RBP13.2□□□□□ -0.3
CCND1-205ENST00000542367 BARHL1Q9BZE3 327 aa13.2□□□□□ -0.3
CCND1-205ENST00000542367 ZNF286AQ9HBT8 521 aa13.2□□□□□ -0.3
CCND1-205ENST00000542367 SERTAD4Q9NUC0 356 aa13.2□□□□□ -0.3
CCND1-205ENST00000542367 TET2Q6N021 2002 aaPredicted RBP13.2□□□□□ -0.3
CCND1-205ENST00000542367 MEIKINA0A087WXM9 373 aa13.19□□□□□ -0.3
CCND1-205ENST00000542367 TRBV5-5A0A0J9YX44 114 aa13.19□□□□□ -0.3
CCND1-205ENST00000542367 KBTBD11-OT1A0A1B0GTJ5 212 aa13.19□□□□□ -0.3
CCND1-205ENST00000542367 FAM90A22PA8MWA6 464 aa13.19□□□□□ -0.3
CCND1-205ENST00000542367 LEUTXA8MZ59 168 aa13.19□□□□□ -0.3
CCND1-205ENST00000542367 TOR1AO14656 332 aa13.19□□□□□ -0.3
CCND1-205ENST00000542367 XPNPEP2O43895 674 aa13.19□□□□□ -0.3
CCND1-205ENST00000542367 CSF1P09603 554 aa13.19□□□□□ -0.3
CCND1-205ENST00000542367 NFYBP25208 207 aa13.19□□□□□ -0.3
CCND1-205ENST00000542367 CD34P28906 385 aa13.19□□□□□ -0.3
CCND1-205ENST00000542367 RPS11P62280 158 aaKnown RBP eCLIP13.19□□□□□ -0.3
CCND1-205ENST00000542367 LAIR2Q6ISS4 152 aa13.19□□□□□ -0.3
CCND1-205ENST00000542367 Q8N2B8 174 aa13.19□□□□□ -0.3
CCND1-205ENST00000542367 PRSS22Q9GZN4 317 aa13.19□□□□□ -0.3
CCND1-205ENST00000542367 METTL9Q9H1A3 318 aa13.19□□□□□ -0.3
CCND1-205ENST00000542367 KIF25Q9UIL4 384 aa13.19□□□□□ -0.3
CCND1-205ENST00000542367 ST3GAL6Q9Y274 331 aa13.19□□□□□ -0.3
CCND1-205ENST00000542367 MEGF8Q7Z7M0 2845 aa13.18□□□□□ -0.3
CCND1-205ENST00000542367 A0A087X0M5 115 aa13.18□□□□□ -0.3
CCND1-205ENST00000542367 A0A1B0GX30 115 aa13.18□□□□□ -0.3
CCND1-205ENST00000542367 EFCAB10A6NFE3 127 aa13.18□□□□□ -0.3
CCND1-205ENST00000542367 CASQ2O14958 399 aaPredicted RBP13.18□□□□□ -0.3
CCND1-205ENST00000542367 CSTBP04080 98 aaKnown RBP13.18□□□□□ -0.3
CCND1-205ENST00000542367 CGB3P0DN86 165 aa13.18□□□□□ -0.3
CCND1-205ENST00000542367 CGB7P0DN87 165 aa13.18□□□□□ -0.3
CCND1-205ENST00000542367 IGFBP3P17936 291 aaPredicted RBP13.18□□□□□ -0.3
CCND1-205ENST00000542367 CD24P25063 80 aa13.18□□□□□ -0.3
CCND1-205ENST00000542367 C21orf33P30042 268 aaPredicted RBP13.18□□□□□ -0.3
CCND1-205ENST00000542367 GLP1RP43220 463 aa13.18□□□□□ -0.3
CCND1-205ENST00000542367 PRRX1P54821 245 aa13.18□□□□□ -0.3
CCND1-205ENST00000542367 BLCAPP62952 87 aa13.18□□□□□ -0.3
CCND1-205ENST00000542367 RIPK1Q13546 671 aa13.18□□□□□ -0.3
CCND1-205ENST00000542367 Q499Y3 187 aa13.18□□□□□ -0.3
CCND1-205ENST00000542367 YIF1BQ5BJH7 314 aa13.18□□□□□ -0.3
CCND1-205ENST00000542367 UTF1Q5T230 341 aa13.18□□□□□ -0.3
CCND1-205ENST00000542367 Q6ZS46 218 aa13.18□□□□□ -0.3
CCND1-205ENST00000542367 OSR2Q8N2R0 312 aa13.18□□□□□ -0.3
CCND1-205ENST00000542367 OR13A1Q8NGR1 328 aa13.18□□□□□ -0.3
CCND1-205ENST00000542367 PLPPR1Q8TBJ4 325 aa13.18□□□□□ -0.3
CCND1-205ENST00000542367 CFHR4Q92496 578 aa13.18□□□□□ -0.3
CCND1-205ENST00000542367 PGLYRP3Q96LB9 341 aa13.18□□□□□ -0.3
CCND1-205ENST00000542367 S100A13Q99584 98 aa13.18□□□□□ -0.3
CCND1-205ENST00000542367 ZNF184Q99676 751 aaPredicted RBP13.18□□□□□ -0.3
CCND1-205ENST00000542367 NCOR1P1Q9H4R4 102 aa13.18□□□□□ -0.3
CCND1-205ENST00000542367 CNOT2Q9NZN8 540 aaKnown RBP13.18□□□□□ -0.3
CCND1-205ENST00000542367 ZNF581Q9P0T4 197 aa13.18□□□□□ -0.3
CCND1-205ENST00000542367 PSORS1C1Q9UIG5 152 aa13.18□□□□□ -0.3
CCND1-205ENST00000542367 PNMA8CA0A1B0GUJ8 204 aa13.17□□□□□ -0.3
CCND1-205ENST00000542367 A0A1W2PPK0 400 aa13.17□□□□□ -0.3
CCND1-205ENST00000542367 BUB1B-PAK6H3BSN5 160 aa13.17□□□□□ -0.3
CCND1-205ENST00000542367 H3BUI4 141 aa13.17□□□□□ -0.3
CCND1-205ENST00000542367 GPX5O75715 221 aa13.17□□□□□ -0.3
CCND1-205ENST00000542367 OR7C1O76099 320 aaPredicted RBP13.17□□□□□ -0.3
CCND1-205ENST00000542367 SERPINA2P20848 420 aa13.17□□□□□ -0.3
CCND1-205ENST00000542367 BRS3P32247 399 aa13.17□□□□□ -0.3
CCND1-205ENST00000542367 KCNJ3P48549 501 aa13.17□□□□□ -0.3
CCND1-205ENST00000542367 HLA-DRB5Q30154 266 aa13.17□□□□□ -0.3
CCND1-205ENST00000542367 RSBN1Q5VWQ0 802 aaPredicted RBP13.17□□□□□ -0.3
CCND1-205ENST00000542367 STX19Q8N4C7 294 aa13.17□□□□□ -0.3
CCND1-205ENST00000542367 SUMF2Q8NBJ7 301 aa13.17□□□□□ -0.3
CCND1-205ENST00000542367 BPIFB6Q8NFQ5 453 aa13.17□□□□□ -0.3
CCND1-205ENST00000542367 FBLIM1Q8WUP2 373 aa13.17□□□□□ -0.3
CCND1-205ENST00000542367 CREB3L1Q96BA8 519 aa13.17□□□□□ -0.3
CCND1-205ENST00000542367 KIRREL1Q96J84 757 aa13.17□□□□□ -0.3
CCND1-205ENST00000542367 DPCDQ9BVM2 203 aaPredicted RBP13.17□□□□□ -0.3
CCND1-205ENST00000542367 PLCXD1Q9NUJ7 323 aa13.17□□□□□ -0.3
CCND1-205ENST00000542367 IL36GQ9NZH8 169 aa13.17□□□□□ -0.3
CCND1-205ENST00000542367 CKLFQ9UBR5 152 aa13.17□□□□□ -0.3
CCND1-205ENST00000542367 VWFP04275 2813 aa13.17□□□□□ -0.3
CCND1-205ENST00000542367 TRAV8-7A0A075B6U6 113 aa13.16□□□□□ -0.3
CCND1-205ENST00000542367 TRAV39A0A0B4J263 110 aa13.16□□□□□ -0.3
CCND1-205ENST00000542367 MAGEA13PA6NCF6 341 aa13.16□□□□□ -0.3
CCND1-205ENST00000542367 GEMIN2O14893 280 aaKnown RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms