RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 FGGYQ96C11 551 aa4.18□□□□□ -1.74
HMGB1P19-201ENST00000517578 APIPQ96GX9 242 aa4.18□□□□□ -1.74
HMGB1P19-201ENST00000517578 ZNF764Q96H86 408 aaPredicted RBP4.18□□□□□ -1.74
HMGB1P19-201ENST00000517578 WDYHV1Q96HA8 205 aa4.18□□□□□ -1.74
HMGB1P19-201ENST00000517578 GRAMD2BQ96HH9 432 aa4.18□□□□□ -1.74
HMGB1P19-201ENST00000517578 CAPNS2Q96L46 248 aa4.18□□□□□ -1.74
HMGB1P19-201ENST00000517578 PGLYRP3Q96LB9 341 aa4.18□□□□□ -1.74
HMGB1P19-201ENST00000517578 GPR82Q96P67 336 aa4.18□□□□□ -1.74
HMGB1P19-201ENST00000517578 FRG2BQ96QU4 278 aa4.18□□□□□ -1.74
HMGB1P19-201ENST00000517578 RSG1Q9BU20 258 aa4.18□□□□□ -1.74
HMGB1P19-201ENST00000517578 DERL1Q9BUN8 251 aa4.18□□□□□ -1.74
HMGB1P19-201ENST00000517578 SPANXDQ9BXN6 97 aa4.18□□□□□ -1.74
HMGB1P19-201ENST00000517578 CDT1Q9H211 546 aa4.18□□□□□ -1.74
HMGB1P19-201ENST00000517578 OR51I2Q9H344 312 aa4.18□□□□□ -1.74
HMGB1P19-201ENST00000517578 TXNIPQ9H3M7 391 aa4.18□□□□□ -1.74
HMGB1P19-201ENST00000517578 PATZ1Q9HBE1 687 aaKnown RBP4.18□□□□□ -1.74
HMGB1P19-201ENST00000517578 MMP25Q9NPA2 562 aa4.18□□□□□ -1.74
HMGB1P19-201ENST00000517578 GPR84Q9NQS5 396 aa4.18□□□□□ -1.74
HMGB1P19-201ENST00000517578 C1orf123Q9NWV4 160 aa4.18□□□□□ -1.74
HMGB1P19-201ENST00000517578 CISD1Q9NZ45 108 aaKnown RBP4.18□□□□□ -1.74
HMGB1P19-201ENST00000517578 JKAMPQ9P055 326 aa4.18□□□□□ -1.74
HMGB1P19-201ENST00000517578 PRSS50Q9UI38 385 aa4.18□□□□□ -1.74
HMGB1P19-201ENST00000517578 MRM2Q9UI43 246 aaKnown RBP4.18□□□□□ -1.74
HMGB1P19-201ENST00000517578 MMP17Q9ULZ9 603 aa4.18□□□□□ -1.74
HMGB1P19-201ENST00000517578 CYSLTR1Q9Y271 337 aa4.18□□□□□ -1.74
HMGB1P19-201ENST00000517578 TRAPPC1Q9Y5R8 145 aa4.18□□□□□ -1.74
HMGB1P19-201ENST00000517578 SHROOM3Q8TF72 1996 aa4.18□□□□□ -1.74
HMGB1P19-201ENST00000517578 COL2A1P02458 1487 aaPredicted RBP4.18□□□□□ -1.74
HMGB1P19-201ENST00000517578 CHD3Q12873 2000 aaKnown RBP4.17□□□□□ -1.74
HMGB1P19-201ENST00000517578 TSC2P49815 1807 aa4.17□□□□□ -1.74
HMGB1P19-201ENST00000517578 TRAV9-2A0A087WT02 112 aa4.17□□□□□ -1.74
HMGB1P19-201ENST00000517578 A0A1W2PRX2 142 aa4.17□□□□□ -1.74
HMGB1P19-201ENST00000517578 DPRXA6NFQ7 191 aa4.17□□□□□ -1.74
HMGB1P19-201ENST00000517578 RIIAD1A6NNX1 92 aa4.17□□□□□ -1.74
HMGB1P19-201ENST00000517578 ANKRD30BLA7E2S9 258 aa4.17□□□□□ -1.74
HMGB1P19-201ENST00000517578 CEACAM18A8MTB9 384 aa4.17□□□□□ -1.74
HMGB1P19-201ENST00000517578 LOC730098B7Z3J9 87 aa4.17□□□□□ -1.74
HMGB1P19-201ENST00000517578 H0YL77 283 aa4.17□□□□□ -1.74
HMGB1P19-201ENST00000517578 K7N7A8 449 aa4.17□□□□□ -1.74
HMGB1P19-201ENST00000517578 GRM6O15303 877 aa4.17□□□□□ -1.74
HMGB1P19-201ENST00000517578 DEDDO75618 318 aa4.17□□□□□ -1.74
HMGB1P19-201ENST00000517578 TRAPPC6AO75865 159 aa4.17□□□□□ -1.74
HMGB1P19-201ENST00000517578 STK17BO94768 372 aa4.17□□□□□ -1.74
HMGB1P19-201ENST00000517578 SLC2A10O95528 541 aa4.17□□□□□ -1.74
HMGB1P19-201ENST00000517578 TGFAP01135 160 aa4.17□□□□□ -1.74
HMGB1P19-201ENST00000517578 IGHG4P01861 327 aa4.17□□□□□ -1.74
HMGB1P19-201ENST00000517578 HLA-DRB1P01911 266 aa4.17□□□□□ -1.74
HMGB1P19-201ENST00000517578 DBIP07108 87 aaKnown RBP4.17□□□□□ -1.74
HMGB1P19-201ENST00000517578 PSG2P11465 335 aa4.17□□□□□ -1.74
HMGB1P19-201ENST00000517578 ZNF43P17038 809 aa4.17□□□□□ -1.74
HMGB1P19-201ENST00000517578 EDNRAP25101 427 aa4.17□□□□□ -1.74
HMGB1P19-201ENST00000517578 ACVR1BP36896 505 aa4.17□□□□□ -1.74
HMGB1P19-201ENST00000517578 TNFSF9P41273 254 aa4.17□□□□□ -1.74
HMGB1P19-201ENST00000517578 CDKN2AP42771 156 aaKnown RBP4.17□□□□□ -1.74
HMGB1P19-201ENST00000517578 ID4P47928 161 aa4.17□□□□□ -1.74
HMGB1P19-201ENST00000517578 PGGT1BP53609 377 aa4.17□□□□□ -1.74
HMGB1P19-201ENST00000517578 CRYBA2P53672 197 aa4.17□□□□□ -1.74
HMGB1P19-201ENST00000517578 UCP3P55916 312 aa4.17□□□□□ -1.74
HMGB1P19-201ENST00000517578 HIST1H1AQ02539 215 aaPredicted RBP4.17□□□□□ -1.74
HMGB1P19-201ENST00000517578 SMAGPQ0VAQ4 97 aa4.17□□□□□ -1.74
HMGB1P19-201ENST00000517578 FOXL1Q12952 345 aa4.17□□□□□ -1.74
HMGB1P19-201ENST00000517578 OLIG2Q13516 323 aa4.17□□□□□ -1.74
HMGB1P19-201ENST00000517578 PPP1R1AQ13522 171 aa4.17□□□□□ -1.74
HMGB1P19-201ENST00000517578 EIF2B1Q14232 305 aaKnown RBP4.17□□□□□ -1.74
HMGB1P19-201ENST00000517578 GNMTQ14749 295 aa4.17□□□□□ -1.74
HMGB1P19-201ENST00000517578 Q499Y3 187 aa4.17□□□□□ -1.74
HMGB1P19-201ENST00000517578 CST9LP1Q5W188 147 aa4.17□□□□□ -1.74
HMGB1P19-201ENST00000517578 SLC18B1Q6NT16 456 aa4.17□□□□□ -1.74
HMGB1P19-201ENST00000517578 TMEM184AQ6ZMB5 413 aa4.17□□□□□ -1.74
HMGB1P19-201ENST00000517578 BCDIN3DQ7Z5W3 292 aaKnown RBP4.17□□□□□ -1.74
HMGB1P19-201ENST00000517578 DEFB106AQ8N104 65 aa4.17□□□□□ -1.74
HMGB1P19-201ENST00000517578 NPEPL1Q8NDH3 523 aa4.17□□□□□ -1.74
HMGB1P19-201ENST00000517578 CADM4Q8NFZ8 388 aa4.17□□□□□ -1.74
HMGB1P19-201ENST00000517578 OR1B1Q8NGR6 318 aa4.17□□□□□ -1.74
HMGB1P19-201ENST00000517578 FAM213BQ8TBF2 198 aa4.17□□□□□ -1.74
HMGB1P19-201ENST00000517578 RPS4Y2Q8TD47 263 aa4.17□□□□□ -1.74
HMGB1P19-201ENST00000517578 RERGQ96A58 199 aaPredicted RBP4.17□□□□□ -1.74
HMGB1P19-201ENST00000517578 GALMQ96C23 342 aa4.17□□□□□ -1.74
HMGB1P19-201ENST00000517578 TMEM126AQ9H061 195 aa4.17□□□□□ -1.74
HMGB1P19-201ENST00000517578 LPAR5Q9H1C0 372 aa4.17□□□□□ -1.74
HMGB1P19-201ENST00000517578 PARLQ9H300 379 aa4.17□□□□□ -1.74
HMGB1P19-201ENST00000517578 SYNPO2LQ9H987 977 aa4.17□□□□□ -1.74
HMGB1P19-201ENST00000517578 ISG20L2Q9H9L3 353 aaKnown RBP4.17□□□□□ -1.74
HMGB1P19-201ENST00000517578 AKIRIN1Q9H9L7 192 aaPredicted RBP4.17□□□□□ -1.74
HMGB1P19-201ENST00000517578 ST20Q9HBF5 79 aa4.17□□□□□ -1.74
HMGB1P19-201ENST00000517578 HINT3Q9NQE9 182 aaKnown RBP4.17□□□□□ -1.74
HMGB1P19-201ENST00000517578 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.17□□□□□ -1.74
HMGB1P19-201ENST00000517578 TMEM30AQ9NV96 361 aa4.17□□□□□ -1.74
HMGB1P19-201ENST00000517578 AHSPQ9NZD4 102 aa4.17□□□□□ -1.74
HMGB1P19-201ENST00000517578 MTCH1Q9NZJ7 389 aa4.17□□□□□ -1.74
HMGB1P19-201ENST00000517578 AK3Q9UIJ7 227 aa4.17□□□□□ -1.74
HMGB1P19-201ENST00000517578 HSPB8Q9UJY1 196 aa4.17□□□□□ -1.74
HMGB1P19-201ENST00000517578 RALYQ9UKM9 306 aaKnown RBP4.17□□□□□ -1.74
HMGB1P19-201ENST00000517578 B3GALT5Q9Y2C3 310 aa4.17□□□□□ -1.74
HMGB1P19-201ENST00000517578 SSC5DA1L4H1 1573 aa4.17□□□□□ -1.74
HMGB1P19-201ENST00000517578 ABCA3Q99758 1704 aa4.17□□□□□ -1.74
HMGB1P19-201ENST00000517578 FRMPD3Q5JV73 1810 aa4.16□□□□□ -1.74
HMGB1P19-201ENST00000517578 NRXN2Q9P2S2 1712 aa4.16□□□□□ -1.74
HMGB1P19-201ENST00000517578 SAA2-SAA4A0A096LPE2 208 aa4.16□□□□□ -1.74
HMGB1P19-201ENST00000517578 EDDM13A0A1B0GTR0 161 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms