RNA–Protein interactions for RNA: ENST00000508852.5

CCHCR1-227, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-227ENST00000508852 RSU1Q15404 277 aa10.89□□□□□ -0.67
CCHCR1-227ENST00000508852 PAN3Q58A45 887 aaKnown RBP10.89□□□□□ -0.67
CCHCR1-227ENST00000508852 RPL22L1Q6P5R6 122 aaKnown RBP10.89□□□□□ -0.67
CCHCR1-227ENST00000508852 TMPRSS11AQ6ZMR5 421 aa10.89□□□□□ -0.67
CCHCR1-227ENST00000508852 LINC00596Q86U02 117 aa10.89□□□□□ -0.67
CCHCR1-227ENST00000508852 ZNF555Q8NEP9 628 aa10.89□□□□□ -0.67
CCHCR1-227ENST00000508852 OR10AC1Q8NH08 325 aa10.89□□□□□ -0.67
CCHCR1-227ENST00000508852 GPR148Q8TDV2 347 aa10.89□□□□□ -0.67
CCHCR1-227ENST00000508852 RPEQ96AT9 228 aa10.89□□□□□ -0.67
CCHCR1-227ENST00000508852 SPACA5Q96QH8 159 aa10.89□□□□□ -0.67
CCHCR1-227ENST00000508852 S100A13Q99584 98 aa10.89□□□□□ -0.67
CCHCR1-227ENST00000508852 MMP28Q9H239 520 aa10.89□□□□□ -0.67
CCHCR1-227ENST00000508852 LINC00574Q9H8X3 128 aa10.89□□□□□ -0.67
CCHCR1-227ENST00000508852 MEIKINA0A087WXM9 373 aa10.88□□□□□ -0.67
CCHCR1-227ENST00000508852 ZNF780AO75290 641 aaPredicted RBP10.88□□□□□ -0.67
CCHCR1-227ENST00000508852 MMP23AO75900 390 aa10.88□□□□□ -0.67
CCHCR1-227ENST00000508852 PF4V1P10720 104 aa10.88□□□□□ -0.67
CCHCR1-227ENST00000508852 CD33P20138 364 aa10.88□□□□□ -0.67
CCHCR1-227ENST00000508852 GZMHP20718 246 aa10.88□□□□□ -0.67
CCHCR1-227ENST00000508852 DCKP27707 260 aa10.88□□□□□ -0.67
CCHCR1-227ENST00000508852 RAB7AP51149 207 aa10.88□□□□□ -0.67
CCHCR1-227ENST00000508852 PPP3R1P63098 170 aa10.88□□□□□ -0.67
CCHCR1-227ENST00000508852 ATXN7L3Q14CW9 347 aaPredicted RBP10.88□□□□□ -0.67
CCHCR1-227ENST00000508852 CDK5R1Q15078 307 aa10.88□□□□□ -0.67
CCHCR1-227ENST00000508852 ZNF529Q6P280 563 aa10.88□□□□□ -0.67
CCHCR1-227ENST00000508852 WFDC9Q8NEX5 89 aa10.88□□□□□ -0.67
CCHCR1-227ENST00000508852 Q8NFD4 153 aa10.88□□□□□ -0.67
CCHCR1-227ENST00000508852 CNIH3Q8TBE1 160 aa10.88□□□□□ -0.67
CCHCR1-227ENST00000508852 TNFAIP8L1Q8WVP5 186 aa10.88□□□□□ -0.67
CCHCR1-227ENST00000508852 SGCDQ92629 289 aa10.88□□□□□ -0.67
CCHCR1-227ENST00000508852 COQ2Q96H96 371 aa10.88□□□□□ -0.67
CCHCR1-227ENST00000508852 OR5M11Q96RB7 305 aa10.88□□□□□ -0.67
CCHCR1-227ENST00000508852 GPR61Q9BZJ8 451 aa10.88□□□□□ -0.67
CCHCR1-227ENST00000508852 IFT22Q9H7X7 185 aa10.88□□□□□ -0.67
CCHCR1-227ENST00000508852 ISG20L2Q9H9L3 353 aaKnown RBP10.88□□□□□ -0.67
CCHCR1-227ENST00000508852 ZNF286AQ9HBT8 521 aa10.88□□□□□ -0.67
CCHCR1-227ENST00000508852 RAB9BQ9NP90 201 aa10.88□□□□□ -0.67
CCHCR1-227ENST00000508852 FGF20Q9NP95 211 aaPredicted RBP10.88□□□□□ -0.67
CCHCR1-227ENST00000508852 FAM118AQ9NWS6 357 aa10.88□□□□□ -0.67
CCHCR1-227ENST00000508852 TCRBV4S1A1TA0A5B7 111 aa10.87□□□□□ -0.67
CCHCR1-227ENST00000508852 LY6LH3BQJ8 138 aa10.87□□□□□ -0.67
CCHCR1-227ENST00000508852 PIN1P1O15428 100 aa10.87□□□□□ -0.67
CCHCR1-227ENST00000508852 IL1AP01583 271 aa10.87□□□□□ -0.67
CCHCR1-227ENST00000508852 CSTBP04080 98 aaKnown RBP10.87□□□□□ -0.67
CCHCR1-227ENST00000508852 NFYBP25208 207 aa10.87□□□□□ -0.67
CCHCR1-227ENST00000508852 SLC6A1P30531 599 aa10.87□□□□□ -0.67
CCHCR1-227ENST00000508852 GLP1RP43220 463 aa10.87□□□□□ -0.67
CCHCR1-227ENST00000508852 SLC35A2P78381 396 aa10.87□□□□□ -0.67
CCHCR1-227ENST00000508852 MADCAM1Q13477 382 aa10.87□□□□□ -0.67
CCHCR1-227ENST00000508852 GPR176Q14439 515 aa10.87□□□□□ -0.67
CCHCR1-227ENST00000508852 C17orf58Q2M2W7 97 aa10.87□□□□□ -0.67
CCHCR1-227ENST00000508852 ABCA11PQ4W5N1 156 aa10.87□□□□□ -0.67
CCHCR1-227ENST00000508852 NHLRC3Q5JS37 347 aa10.87□□□□□ -0.67
CCHCR1-227ENST00000508852 ASCL4Q6XD76 172 aa10.87□□□□□ -0.67
CCHCR1-227ENST00000508852 SATL1Q86VE3 508 aa10.87□□□□□ -0.67
CCHCR1-227ENST00000508852 OR8H3Q8N146 312 aa10.87□□□□□ -0.67
CCHCR1-227ENST00000508852 OR52I1Q8NGK6 324 aa10.87□□□□□ -0.67
CCHCR1-227ENST00000508852 TOMM40LQ969M1 308 aa10.87□□□□□ -0.67
CCHCR1-227ENST00000508852 KIRREL1Q96J84 757 aa10.87□□□□□ -0.67
CCHCR1-227ENST00000508852 NR1H4Q96RI1 486 aaPredicted RBP10.87□□□□□ -0.67
CCHCR1-227ENST00000508852 PDCD1LG2Q9BQ51 273 aa10.87□□□□□ -0.67
CCHCR1-227ENST00000508852 METTL9Q9H1A3 318 aa10.87□□□□□ -0.67
CCHCR1-227ENST00000508852 S100A14Q9HCY8 104 aa10.87□□□□□ -0.67
CCHCR1-227ENST00000508852 TMEM138Q9NPI0 162 aa10.87□□□□□ -0.67
CCHCR1-227ENST00000508852 C8orf4Q9NR00 106 aa10.87□□□□□ -0.67
CCHCR1-227ENST00000508852 CHCHD3Q9NX63 227 aaKnown RBP10.87□□□□□ -0.67
CCHCR1-227ENST00000508852 CALYQ9NYX4 217 aa10.87□□□□□ -0.67
CCHCR1-227ENST00000508852 IDI2-AS1Q9NZ38 188 aa10.87□□□□□ -0.67
CCHCR1-227ENST00000508852 IL36GQ9NZH8 169 aa10.87□□□□□ -0.67
CCHCR1-227ENST00000508852 MOB4Q9Y3A3 225 aa10.87□□□□□ -0.67
CCHCR1-227ENST00000508852 HSPE1-MOB4S4R3N1 261 aa10.87□□□□□ -0.67
CCHCR1-227ENST00000508852 ADARB2-AS1A8MUL3 147 aa10.86□□□□□ -0.67
CCHCR1-227ENST00000508852 J3QR06 171 aa10.86□□□□□ -0.67
CCHCR1-227ENST00000508852 PF4P02776 101 aa10.86□□□□□ -0.67
CCHCR1-227ENST00000508852 CGB3P0DN86 165 aa10.86□□□□□ -0.67
CCHCR1-227ENST00000508852 CGB7P0DN87 165 aa10.86□□□□□ -0.67
CCHCR1-227ENST00000508852 MYL12AP19105 171 aa10.86□□□□□ -0.67
CCHCR1-227ENST00000508852 OR3A4PP47883 348 aa10.86□□□□□ -0.67
CCHCR1-227ENST00000508852 LOXL3P58215 753 aa10.86□□□□□ -0.67
CCHCR1-227ENST00000508852 RBM39Q14498 530 aaKnown RBP10.86□□□□□ -0.67
CCHCR1-227ENST00000508852 LYG1Q8N1E2 194 aa10.86□□□□□ -0.67
CCHCR1-227ENST00000508852 PQLC1Q8N2U9 271 aa10.86□□□□□ -0.67
CCHCR1-227ENST00000508852 RCC1LQ96I51 464 aaKnown RBP10.86□□□□□ -0.67
CCHCR1-227ENST00000508852 ZNF649Q9BS31 505 aa10.86□□□□□ -0.67
CCHCR1-227ENST00000508852 FAM192AQ9GZU8 254 aa10.86□□□□□ -0.67
CCHCR1-227ENST00000508852 CKLFQ9UBR5 152 aa10.86□□□□□ -0.67
CCHCR1-227ENST00000508852 KIF25Q9UIL4 384 aa10.86□□□□□ -0.67
CCHCR1-227ENST00000508852 NOTCH3Q9UM47 2321 aa10.85□□□□□ -0.67
CCHCR1-227ENST00000508852 TRAV24A0A0B4J272 114 aa10.85□□□□□ -0.67
CCHCR1-227ENST00000508852 FAM90A18PA6NE21 464 aa10.85□□□□□ -0.67
CCHCR1-227ENST00000508852 FAM90A16PA6NEW6 464 aa10.85□□□□□ -0.67
CCHCR1-227ENST00000508852 FAM90A20PA6NIJ5 464 aa10.85□□□□□ -0.67
CCHCR1-227ENST00000508852 FAM90A9PA6NNJ1 464 aa10.85□□□□□ -0.67
CCHCR1-227ENST00000508852 FAM90A12PA8MX19 464 aa10.85□□□□□ -0.67
CCHCR1-227ENST00000508852 FAM90A5PA8MXJ8 464 aa10.85□□□□□ -0.67
CCHCR1-227ENST00000508852 NPIPB11E5RHQ5 1161 aa10.85□□□□□ -0.67
CCHCR1-227ENST00000508852 GABRPO00591 440 aa10.85□□□□□ -0.67
CCHCR1-227ENST00000508852 FGF16O43320 207 aa10.85□□□□□ -0.67
CCHCR1-227ENST00000508852 LPLP06858 475 aa10.85□□□□□ -0.67
CCHCR1-227ENST00000508852 FAM90A15PP0C7V4 464 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms