RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 DUXBA0A1W2PPF3 345 aa14.5□□□□□ -0.09
PCDHA1-203ENST00000504120 J3QR89 54 aa14.5□□□□□ -0.09
PCDHA1-203ENST00000504120 OR2J3O76001 311 aa14.5□□□□□ -0.09
PCDHA1-203ENST00000504120 C3AR1Q16581 482 aa14.5□□□□□ -0.09
PCDHA1-203ENST00000504120 SLC2A9Q9NRM0 540 aa14.5□□□□□ -0.09
PCDHA1-203ENST00000504120 MAP1BP46821 2468 aaKnown RBP14.5□□□□□ -0.09
PCDHA1-203ENST00000504120 CDS2O95674 445 aa14.5□□□□□ -0.09
PCDHA1-203ENST00000504120 RD3LP0DJH9 198 aa14.5□□□□□ -0.09
PCDHA1-203ENST00000504120 WDR73Q6P4I2 378 aa14.5□□□□□ -0.09
PCDHA1-203ENST00000504120 INO80CQ6PI98 192 aaPredicted RBP14.5□□□□□ -0.09
PCDHA1-203ENST00000504120 C9orf62Q8N4C0 152 aa14.5□□□□□ -0.09
PCDHA1-203ENST00000504120 ZBTB34Q8NCN2 500 aa14.5□□□□□ -0.09
PCDHA1-203ENST00000504120 NTMQ9P121 344 aa14.5□□□□□ -0.09
PCDHA1-203ENST00000504120 NAT8Q9UHE5 227 aa14.5□□□□□ -0.09
PCDHA1-203ENST00000504120 TINAGQ9UJW2 476 aa14.5□□□□□ -0.09
PCDHA1-203ENST00000504120 TMEM210A6NLX4 147 aa14.5□□□□□ -0.09
PCDHA1-203ENST00000504120 SPCS3P61009 180 aa14.5□□□□□ -0.09
PCDHA1-203ENST00000504120 DTD1Q8TEA8 209 aa14.5□□□□□ -0.09
PCDHA1-203ENST00000504120 RNF7Q9UBF6 113 aa14.5□□□□□ -0.09
PCDHA1-203ENST00000504120 MED19A0JLT2 244 aaPredicted RBP14.5□□□□□ -0.09
PCDHA1-203ENST00000504120 FCN1O00602 326 aa14.5□□□□□ -0.09
PCDHA1-203ENST00000504120 ERGP11308 486 aa14.5□□□□□ -0.09
PCDHA1-203ENST00000504120 FGF8P55075 233 aaPredicted RBP14.5□□□□□ -0.09
PCDHA1-203ENST00000504120 VAMP3Q15836 100 aa14.5□□□□□ -0.09
PCDHA1-203ENST00000504120 ZNF79Q15937 498 aa14.5□□□□□ -0.09
PCDHA1-203ENST00000504120 STPG2Q8N412 459 aa14.5□□□□□ -0.09
PCDHA1-203ENST00000504120 CCL28Q9NRJ3 127 aa14.5□□□□□ -0.09
PCDHA1-203ENST00000504120 TECRQ9NZ01 308 aaKnown RBP14.5□□□□□ -0.09
PCDHA1-203ENST00000504120 TMPRSS2O15393 492 aa14.49□□□□□ -0.09
PCDHA1-203ENST00000504120 HPXP02790 462 aa14.49□□□□□ -0.09
PCDHA1-203ENST00000504120 OPN1MWP04001 364 aa14.49□□□□□ -0.09
PCDHA1-203ENST00000504120 OPN1MW2P0DN77 364 aa14.49□□□□□ -0.09
PCDHA1-203ENST00000504120 OPN1MW3P0DN78 364 aa14.49□□□□□ -0.09
PCDHA1-203ENST00000504120 BLNKQ8WV28 456 aa14.49□□□□□ -0.09
PCDHA1-203ENST00000504120 PRR13Q9NZ81 148 aa14.49□□□□□ -0.09
PCDHA1-203ENST00000504120 CD300CQ08708 224 aa14.49□□□□□ -0.09
PCDHA1-203ENST00000504120 OR11H7Q8NGC8 314 aa14.49□□□□□ -0.09
PCDHA1-203ENST00000504120 OR10D4PQ8NGN7 298 aa14.49□□□□□ -0.09
PCDHA1-203ENST00000504120 SCMH1Q96GD3 660 aa14.49□□□□□ -0.09
PCDHA1-203ENST00000504120 PARD6AQ9NPB6 346 aa14.49□□□□□ -0.09
PCDHA1-203ENST00000504120 OR2W1Q9Y3N9 320 aa14.49□□□□□ -0.09
PCDHA1-203ENST00000504120 IGKV1D-16P01601 117 aa14.49□□□□□ -0.09
PCDHA1-203ENST00000504120 TNXAQ16473 311 aa14.49□□□□□ -0.09
PCDHA1-203ENST00000504120 DCAF10Q5QP82 559 aa14.49□□□□□ -0.09
PCDHA1-203ENST00000504120 RNASEKQ6P5S7 137 aaKnown RBP14.49□□□□□ -0.09
PCDHA1-203ENST00000504120 TOMM20LQ6UXN7 152 aa14.49□□□□□ -0.09
PCDHA1-203ENST00000504120 OR4A4PQ8NGN8 299 aa14.49□□□□□ -0.09
PCDHA1-203ENST00000504120 CENPVL1A0A0U1RR11 272 aa14.49□□□□□ -0.09
PCDHA1-203ENST00000504120 RPL36A-HNRNPH2H7BZ11 118 aa14.49□□□□□ -0.09
PCDHA1-203ENST00000504120 FBXW9Q5XUX1 488 aa14.49□□□□□ -0.09
PCDHA1-203ENST00000504120 PRSS27Q9BQR3 290 aa14.49□□□□□ -0.09
PCDHA1-203ENST00000504120 IGHV3-13P01766 116 aa14.48□□□□□ -0.09
PCDHA1-203ENST00000504120 IGHV3-7P01780 117 aa14.48□□□□□ -0.09
PCDHA1-203ENST00000504120 ASAH2BP0C7U1 165 aa14.48□□□□□ -0.09
PCDHA1-203ENST00000504120 HNRNPA3P51991 378 aaKnown RBP14.48□□□□□ -0.09
PCDHA1-203ENST00000504120 SNRPEP62304 92 aaKnown RBP14.48□□□□□ -0.09
PCDHA1-203ENST00000504120 ZNF260Q3ZCT1 412 aa14.48□□□□□ -0.09
PCDHA1-203ENST00000504120 MOGAT3Q86VF5 341 aa14.48□□□□□ -0.09
PCDHA1-203ENST00000504120 MRPL24Q96A35 216 aaKnown RBP14.48□□□□□ -0.09
PCDHA1-203ENST00000504120 ZNF501Q96CX3 271 aaPredicted RBP14.48□□□□□ -0.09
PCDHA1-203ENST00000504120 ADAT3Q96EY9 351 aaPredicted RBP14.48□□□□□ -0.09
PCDHA1-203ENST00000504120 GMPPAQ96IJ6 420 aaPredicted RBP14.48□□□□□ -0.09
PCDHA1-203ENST00000504120 ZNF71Q9NQZ8 489 aaPredicted RBP14.48□□□□□ -0.09
PCDHA1-203ENST00000504120 OR4A8P0C604 315 aa14.48□□□□□ -0.09
PCDHA1-203ENST00000504120 UBE2L3P68036 154 aaKnown RBP14.48□□□□□ -0.09
PCDHA1-203ENST00000504120 HOGA1Q86XE5 327 aa14.48□□□□□ -0.09
PCDHA1-203ENST00000504120 BVESQ8NE79 360 aa14.48□□□□□ -0.09
PCDHA1-203ENST00000504120 DOK5Q9P104 306 aa14.48□□□□□ -0.09
PCDHA1-203ENST00000504120 TRIP11Q15643 1979 aa14.48□□□□□ -0.09
PCDHA1-203ENST00000504120 TMEM218A2RU14 115 aa14.48□□□□□ -0.09
PCDHA1-203ENST00000504120 KIAA1324LA8MWY0 1029 aaPredicted RBP14.48□□□□□ -0.09
PCDHA1-203ENST00000504120 DXOO77932 396 aaKnown RBP14.48□□□□□ -0.09
PCDHA1-203ENST00000504120 AMTP48728 403 aa14.48□□□□□ -0.09
PCDHA1-203ENST00000504120 PLPPR5Q32ZL2 321 aa14.48□□□□□ -0.09
PCDHA1-203ENST00000504120 BSXQ3C1V8 233 aa14.48□□□□□ -0.09
PCDHA1-203ENST00000504120 RND1Q92730 232 aa14.48□□□□□ -0.09
PCDHA1-203ENST00000504120 Q9N2K0 584 aa14.48□□□□□ -0.09
PCDHA1-203ENST00000504120 B4E171 279 aa14.48□□□□□ -0.09
PCDHA1-203ENST00000504120 ORM2P19652 201 aa14.48□□□□□ -0.09
PCDHA1-203ENST00000504120 TSPAN7P41732 249 aa14.48□□□□□ -0.09
PCDHA1-203ENST00000504120 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.48□□□□□ -0.09
PCDHA1-203ENST00000504120 C11orf42Q8N5U0 333 aa14.48□□□□□ -0.09
PCDHA1-203ENST00000504120 OR52L2PQ8NGH6 319 aa14.48□□□□□ -0.09
PCDHA1-203ENST00000504120 SIPA1L1O43166 1804 aa14.48□□□□□ -0.09
PCDHA1-203ENST00000504120 SULT1A1P50225 295 aa14.47□□□□□ -0.09
PCDHA1-203ENST00000504120 ASCL5Q7RTU5 278 aa14.47□□□□□ -0.09
PCDHA1-203ENST00000504120 ZNF665Q9H7R5 613 aa14.47□□□□□ -0.09
PCDHA1-203ENST00000504120 SAP30LQ9HAJ7 183 aa14.47□□□□□ -0.09
PCDHA1-203ENST00000504120 IGKV1-8A0A0C4DH67 115 aa14.47□□□□□ -0.09
PCDHA1-203ENST00000504120 A0A1B0GU03 582 aa14.47□□□□□ -0.09
PCDHA1-203ENST00000504120 LYZP61626 148 aa14.47□□□□□ -0.09
PCDHA1-203ENST00000504120 PIGYQ3MUY2 71 aa14.47□□□□□ -0.09
PCDHA1-203ENST00000504120 OR8B3Q8NGG8 313 aa14.47□□□□□ -0.09
PCDHA1-203ENST00000504120 OR8B2Q96RD0 313 aa14.47□□□□□ -0.09
PCDHA1-203ENST00000504120 PILRAQ9UKJ1 303 aa14.47□□□□□ -0.09
PCDHA1-203ENST00000504120 LIPGQ9Y5X9 500 aa14.47□□□□□ -0.09
PCDHA1-203ENST00000504120 ZNF154Q13106 437 aa14.47□□□□□ -0.09
PCDHA1-203ENST00000504120 HIKESHIQ53FT3 197 aa14.47□□□□□ -0.09
PCDHA1-203ENST00000504120 SPNS3Q6ZMD2 512 aa14.47□□□□□ -0.09
PCDHA1-203ENST00000504120 PDPNQ86YL7 162 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms