RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 OR1S2Q8NGQ3 325 aa2.83□□□□□ -1.96
ECHDC1-217ENST00000488087 OR2V1Q8NHB1 315 aa2.83□□□□□ -1.96
ECHDC1-217ENST00000488087 LYPD6BQ8NI32 183 aa2.83□□□□□ -1.96
ECHDC1-217ENST00000488087 STAG3L4Q8TBR4 150 aa2.83□□□□□ -1.96
ECHDC1-217ENST00000488087 CA5BP1Q8WTZ4 195 aa2.83□□□□□ -1.96
ECHDC1-217ENST00000488087 DYNLL2Q96FJ2 89 aa2.83□□□□□ -1.96
ECHDC1-217ENST00000488087 C12orf42Q96LP6 360 aa2.83□□□□□ -1.96
ECHDC1-217ENST00000488087 CLCC1Q96S66 551 aa2.83□□□□□ -1.96
ECHDC1-217ENST00000488087 STACQ99469 402 aa2.83□□□□□ -1.96
ECHDC1-217ENST00000488087 CITED1Q99966 193 aa2.83□□□□□ -1.96
ECHDC1-217ENST00000488087 ACBD6Q9BR61 282 aa2.83□□□□□ -1.96
ECHDC1-217ENST00000488087 DOHHQ9BU89 302 aa2.83□□□□□ -1.96
ECHDC1-217ENST00000488087 TM2D1Q9BX74 207 aa2.83□□□□□ -1.96
ECHDC1-217ENST00000488087 SNHG12Q9BXW3 62 aa2.83□□□□□ -1.96
ECHDC1-217ENST00000488087 C1orf198Q9H425 327 aa2.83□□□□□ -1.96
ECHDC1-217ENST00000488087 IKZF5Q9H5V7 419 aa2.83□□□□□ -1.96
ECHDC1-217ENST00000488087 CWH43Q9H720 699 aa2.83□□□□□ -1.96
ECHDC1-217ENST00000488087 PNO1Q9NRX1 252 aaKnown RBP2.83□□□□□ -1.96
ECHDC1-217ENST00000488087 WRAP73Q9P2S5 460 aaPredicted RBP2.83□□□□□ -1.96
ECHDC1-217ENST00000488087 CLEC2DQ9UHP7 191 aa2.83□□□□□ -1.96
ECHDC1-217ENST00000488087 TNFSF18Q9UNG2 199 aa2.83□□□□□ -1.96
ECHDC1-217ENST00000488087 ZFP30Q9Y2G7 519 aa2.83□□□□□ -1.96
ECHDC1-217ENST00000488087 UBIAD1Q9Y5Z9 338 aa2.83□□□□□ -1.96
ECHDC1-217ENST00000488087 SLCO1B1Q9Y6L6 691 aa2.83□□□□□ -1.96
ECHDC1-217ENST00000488087 ZNF638Q14966 1978 aaKnown RBP2.83□□□□□ -1.96
ECHDC1-217ENST00000488087 BAZ2BQ9UIF8 2168 aaKnown RBP2.83□□□□□ -1.96
ECHDC1-217ENST00000488087 SIP14410 1827 aa2.82□□□□□ -1.96
ECHDC1-217ENST00000488087 A0A087WWC5 75 aa2.82□□□□□ -1.96
ECHDC1-217ENST00000488087 TRBV6-7A0A0A0MS04 114 aa2.82□□□□□ -1.96
ECHDC1-217ENST00000488087 TRAV1-2A0A0B4J238 106 aa2.82□□□□□ -1.96
ECHDC1-217ENST00000488087 KIR2DL5BA0A0G2JN68 375 aa2.82□□□□□ -1.96
ECHDC1-217ENST00000488087 KIR2DL5BA0A0G2JPC4 375 aa2.82□□□□□ -1.96
ECHDC1-217ENST00000488087 A0A1B0GTI1 187 aa2.82□□□□□ -1.96
ECHDC1-217ENST00000488087 SLC5A10A0PJK1 596 aa2.82□□□□□ -1.96
ECHDC1-217ENST00000488087 ANKRD20A5PA0PJZ0 165 aa2.82□□□□□ -1.96
ECHDC1-217ENST00000488087 A8MU10 97 aa2.82□□□□□ -1.96
ECHDC1-217ENST00000488087 TMEM238C9JI98 176 aa2.82□□□□□ -1.96
ECHDC1-217ENST00000488087 E9PLD3 99 aa2.82□□□□□ -1.96
ECHDC1-217ENST00000488087 RNASEK-C17orf49H0YIS7 233 aa2.82□□□□□ -1.96
ECHDC1-217ENST00000488087 PPP1R2P9O14990 202 aa2.82□□□□□ -1.96
ECHDC1-217ENST00000488087 MAGEB4O15481 346 aaPredicted RBP2.82□□□□□ -1.96
ECHDC1-217ENST00000488087 RRP8O43159 456 aaKnown RBP2.82□□□□□ -1.96
ECHDC1-217ENST00000488087 CLDN11O75508 207 aa2.82□□□□□ -1.96
ECHDC1-217ENST00000488087 STK16O75716 305 aa2.82□□□□□ -1.96
ECHDC1-217ENST00000488087 IGF2P01344 180 aa2.82□□□□□ -1.96
ECHDC1-217ENST00000488087 CRYGCP07315 174 aa2.82□□□□□ -1.96
ECHDC1-217ENST00000488087 CD14P08571 375 aa2.82□□□□□ -1.96
ECHDC1-217ENST00000488087 CTXN2P0C2S0 81 aa2.82□□□□□ -1.96
ECHDC1-217ENST00000488087 NBEAP1P0C6P0 100 aa2.82□□□□□ -1.96
ECHDC1-217ENST00000488087 LINC00032P0C843 101 aa2.82□□□□□ -1.96
ECHDC1-217ENST00000488087 DNAH10OSP0CZ25 163 aa2.82□□□□□ -1.96
ECHDC1-217ENST00000488087 PNMTP11086 282 aa2.82□□□□□ -1.96
ECHDC1-217ENST00000488087 TPT1P13693 172 aaKnown RBP2.82□□□□□ -1.96
ECHDC1-217ENST00000488087 FOLR1P15328 257 aa2.82□□□□□ -1.96
ECHDC1-217ENST00000488087 DTYMKP23919 212 aa2.82□□□□□ -1.96
ECHDC1-217ENST00000488087 NFYBP25208 207 aa2.82□□□□□ -1.96
ECHDC1-217ENST00000488087 GABRR2P28476 465 aa2.82□□□□□ -1.96
ECHDC1-217ENST00000488087 OR1E1P30953 314 aa2.82□□□□□ -1.96
ECHDC1-217ENST00000488087 OTX1P32242 354 aaPredicted RBP2.82□□□□□ -1.96
ECHDC1-217ENST00000488087 SLC1A2P43004 574 aa2.82□□□□□ -1.96
ECHDC1-217ENST00000488087 MAGEA5P43359 124 aa2.82□□□□□ -1.96
ECHDC1-217ENST00000488087 IDH2P48735 452 aaKnown RBP2.82□□□□□ -1.96
ECHDC1-217ENST00000488087 EFNA3P52797 238 aa2.82□□□□□ -1.96
ECHDC1-217ENST00000488087 FOXA1P55317 472 aa2.82□□□□□ -1.96
ECHDC1-217ENST00000488087 CLDN12P56749 244 aa2.82□□□□□ -1.96
ECHDC1-217ENST00000488087 PRPS1P60891 318 aa2.82□□□□□ -1.96
ECHDC1-217ENST00000488087 SELENOTP62341 195 aa2.82□□□□□ -1.96
ECHDC1-217ENST00000488087 RPS25P62851 125 aaKnown RBP2.82□□□□□ -1.96
ECHDC1-217ENST00000488087 RPL8P62917 257 aaKnown RBP2.82□□□□□ -1.96
ECHDC1-217ENST00000488087 SELENOWP63302 87 aa2.82□□□□□ -1.96
ECHDC1-217ENST00000488087 ACVR1Q04771 509 aa2.82□□□□□ -1.96
ECHDC1-217ENST00000488087 SSBP1Q04837 148 aaKnown RBP2.82□□□□□ -1.96
ECHDC1-217ENST00000488087 MXD1Q05195 221 aa2.82□□□□□ -1.96
ECHDC1-217ENST00000488087 ZNF154Q13106 437 aa2.82□□□□□ -1.96
ECHDC1-217ENST00000488087 PRDX4Q13162 271 aa2.82□□□□□ -1.96
ECHDC1-217ENST00000488087 USF2Q15853 346 aaPredicted RBP2.82□□□□□ -1.96
ECHDC1-217ENST00000488087 MAPK14Q16539 360 aa2.82□□□□□ -1.96
ECHDC1-217ENST00000488087 EOGTQ5NDL2 527 aa2.82□□□□□ -1.96
ECHDC1-217ENST00000488087 C10orf120Q5SQS8 335 aa2.82□□□□□ -1.96
ECHDC1-217ENST00000488087 HENMT1Q5T8I9 393 aaKnown RBP2.82□□□□□ -1.96
ECHDC1-217ENST00000488087 PIP5KL1Q5T9C9 394 aa2.82□□□□□ -1.96
ECHDC1-217ENST00000488087 GLT8D1Q68CQ7 371 aa2.82□□□□□ -1.96
ECHDC1-217ENST00000488087 PVRIGQ6DKI7 326 aa2.82□□□□□ -1.96
ECHDC1-217ENST00000488087 FAHD2BQ6P2I3 314 aaPredicted RBP2.82□□□□□ -1.96
ECHDC1-217ENST00000488087 SSX6Q7RTT6 188 aa2.82□□□□□ -1.96
ECHDC1-217ENST00000488087 PID1Q7Z2X4 250 aa2.82□□□□□ -1.96
ECHDC1-217ENST00000488087 TRAPPC5Q8IUR0 188 aa2.82□□□□□ -1.96
ECHDC1-217ENST00000488087 SLC30A8Q8IWU4 369 aa2.82□□□□□ -1.96
ECHDC1-217ENST00000488087 FBXO16Q8IX29 292 aaPredicted RBP2.82□□□□□ -1.96
ECHDC1-217ENST00000488087 BAP18Q8IXM2 172 aa2.82□□□□□ -1.96
ECHDC1-217ENST00000488087 KIR2DL5AQ8N109 375 aa2.82□□□□□ -1.96
ECHDC1-217ENST00000488087 GTPBP8Q8N3Z3 284 aaPredicted RBP2.82□□□□□ -1.96
ECHDC1-217ENST00000488087 OR51G2Q8NGK0 314 aa2.82□□□□□ -1.96
ECHDC1-217ENST00000488087 OR52I1Q8NGK6 324 aa2.82□□□□□ -1.96
ECHDC1-217ENST00000488087 OR10D4PQ8NGN7 298 aa2.82□□□□□ -1.96
ECHDC1-217ENST00000488087 OR4A4PQ8NGN8 299 aa2.82□□□□□ -1.96
ECHDC1-217ENST00000488087 NEIL3Q8TAT5 605 aa2.82□□□□□ -1.96
ECHDC1-217ENST00000488087 NUBPLQ8TB37 319 aa2.82□□□□□ -1.96
ECHDC1-217ENST00000488087 ORAOV1Q8WV07 137 aa2.82□□□□□ -1.96
ECHDC1-217ENST00000488087 GEMIN6Q8WXD5 167 aaKnown RBP2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms