RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 CFHR2P36980 270 aa11.93□□□□□ -0.5
USP11-207ENST00000478596 CEBPDP49716 269 aaPredicted RBP11.93□□□□□ -0.5
USP11-207ENST00000478596 RBM11P57052 281 aaKnown RBP11.93□□□□□ -0.5
USP11-207ENST00000478596 FGF12P61328 243 aa11.93□□□□□ -0.5
USP11-207ENST00000478596 PIGYQ3MUY2 71 aa11.93□□□□□ -0.5
USP11-207ENST00000478596 SPIN3Q5JUX0 258 aa11.93□□□□□ -0.5
USP11-207ENST00000478596 OR10K2Q6IF99 312 aa11.93□□□□□ -0.5
USP11-207ENST00000478596 MZT2AQ6P582 158 aa11.93□□□□□ -0.5
USP11-207ENST00000478596 OR2W3Q7Z3T1 314 aa11.93□□□□□ -0.5
USP11-207ENST00000478596 FAM90A1Q86YD7 464 aa11.93□□□□□ -0.5
USP11-207ENST00000478596 NEK7Q8TDX7 302 aa11.93□□□□□ -0.5
USP11-207ENST00000478596 DYRK2Q92630 601 aa11.93□□□□□ -0.5
USP11-207ENST00000478596 URM1Q9BTM9 101 aaKnown RBP11.93□□□□□ -0.5
USP11-207ENST00000478596 HMG20AQ9NP66 347 aa11.93□□□□□ -0.5
USP11-207ENST00000478596 CCDC59Q9P031 241 aaKnown RBP11.93□□□□□ -0.5
USP11-207ENST00000478596 IL36RNQ9UBH0 155 aa11.93□□□□□ -0.5
USP11-207ENST00000478596 ST3GAL6Q9Y274 331 aa11.93□□□□□ -0.5
USP11-207ENST00000478596 A0A1W2PP11 408 aa11.92□□□□□ -0.5
USP11-207ENST00000478596 RFPL4AA6NLU0 287 aa11.92□□□□□ -0.5
USP11-207ENST00000478596 RFPL4AL1F8VTS6 287 aa11.92□□□□□ -0.5
USP11-207ENST00000478596 F8VVB4 439 aa11.92□□□□□ -0.5
USP11-207ENST00000478596 F8VWA3 439 aa11.92□□□□□ -0.5
USP11-207ENST00000478596 SIRPB1O00241 398 aa11.92□□□□□ -0.5
USP11-207ENST00000478596 NOS1APO75052 506 aaPredicted RBP11.92□□□□□ -0.5
USP11-207ENST00000478596 OR7C1O76099 320 aaPredicted RBP11.92□□□□□ -0.5
USP11-207ENST00000478596 HAND1O96004 215 aa11.92□□□□□ -0.5
USP11-207ENST00000478596 CPT2P23786 658 aa11.92□□□□□ -0.5
USP11-207ENST00000478596 ZNF404Q494X3 552 aa11.92□□□□□ -0.5
USP11-207ENST00000478596 CRIP3Q6Q6R5 217 aa11.92□□□□□ -0.5
USP11-207ENST00000478596 SLC36A1Q7Z2H8 476 aa11.92□□□□□ -0.5
USP11-207ENST00000478596 TMEM185AQ8NFB2 350 aa11.92□□□□□ -0.5
USP11-207ENST00000478596 OR8B3Q8NGG8 313 aa11.92□□□□□ -0.5
USP11-207ENST00000478596 OR51T1Q8NGJ9 327 aa11.92□□□□□ -0.5
USP11-207ENST00000478596 DGCR14Q96DF8 476 aaKnown RBP11.92□□□□□ -0.5
USP11-207ENST00000478596 OR8B2Q96RD0 313 aa11.92□□□□□ -0.5
USP11-207ENST00000478596 C6orf62Q9GZU0 229 aaPredicted RBP11.92□□□□□ -0.5
USP11-207ENST00000478596 ETV7Q9Y603 341 aa11.92□□□□□ -0.5
USP11-207ENST00000478596 TMEM272A0A1B0GTI8 110 aa11.91□□□□□ -0.5
USP11-207ENST00000478596 HSPB6O14558 160 aa11.91□□□□□ -0.5
USP11-207ENST00000478596 SH2D1BO14796 132 aa11.91□□□□□ -0.5
USP11-207ENST00000478596 RGS5O15539 181 aa11.91□□□□□ -0.5
USP11-207ENST00000478596 PLXNB1O43157 2135 aa11.91□□□□□ -0.5
USP11-207ENST00000478596 PAHP00439 452 aa11.91□□□□□ -0.5
USP11-207ENST00000478596 LHBP01229 141 aa11.91□□□□□ -0.5
USP11-207ENST00000478596 TFF1P04155 84 aa11.91□□□□□ -0.5
USP11-207ENST00000478596 ZNF182P17025 639 aaPredicted RBP11.91□□□□□ -0.5
USP11-207ENST00000478596 ERVK11-1P61568 191 aa11.91□□□□□ -0.5
USP11-207ENST00000478596 IL13RA2Q14627 380 aa11.91□□□□□ -0.5
USP11-207ENST00000478596 OXLD1Q5BKU9 147 aa11.91□□□□□ -0.5
USP11-207ENST00000478596 NKAPLQ5M9Q1 402 aa11.91□□□□□ -0.5
USP11-207ENST00000478596 ATAD3CQ5T2N8 411 aa11.91□□□□□ -0.5
USP11-207ENST00000478596 TEX36Q5VZQ5 186 aa11.91□□□□□ -0.5
USP11-207ENST00000478596 STUMQ69YW2 141 aa11.91□□□□□ -0.5
USP11-207ENST00000478596 DCDC5Q6ZRR9 648 aa11.91□□□□□ -0.5
USP11-207ENST00000478596 LINC00596Q86U02 117 aa11.91□□□□□ -0.5
USP11-207ENST00000478596 TMEM104Q8NE00 496 aa11.91□□□□□ -0.5
USP11-207ENST00000478596 KCTD12Q96CX2 325 aaKnown RBP11.91□□□□□ -0.5
USP11-207ENST00000478596 CCL13Q99616 98 aa11.91□□□□□ -0.5
USP11-207ENST00000478596 TMEM246Q9BRR3 403 aa11.91□□□□□ -0.5
USP11-207ENST00000478596 ATG5Q9H1Y0 275 aa11.91□□□□□ -0.5
USP11-207ENST00000478596 HES4Q9HCC6 221 aa11.91□□□□□ -0.5
USP11-207ENST00000478596 ABRACLQ9P1F3 81 aa11.91□□□□□ -0.5
USP11-207ENST00000478596 COMMD3Q9UBI1 195 aa11.91□□□□□ -0.5
USP11-207ENST00000478596 SACSQ9NZJ4 4579 aa11.91□□□□□ -0.5
USP11-207ENST00000478596 NOTCH3Q9UM47 2321 aa11.91□□□□□ -0.5
USP11-207ENST00000478596 TRAV40A0A0B4J280 105 aa11.9□□□□□ -0.5
USP11-207ENST00000478596 METTL21EPA6NDL7 271 aa11.9□□□□□ -0.5
USP11-207ENST00000478596 CEACAM18A8MTB9 384 aa11.9□□□□□ -0.5
USP11-207ENST00000478596 FAM25AB3EWG3 89 aa11.9□□□□□ -0.5
USP11-207ENST00000478596 FAM25CB3EWG5 89 aa11.9□□□□□ -0.5
USP11-207ENST00000478596 FAM25GB3EWG6 89 aa11.9□□□□□ -0.5
USP11-207ENST00000478596 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.9□□□□□ -0.5
USP11-207ENST00000478596 DEGS1O15121 323 aa11.9□□□□□ -0.5
USP11-207ENST00000478596 NDUFA2O43678 99 aa11.9□□□□□ -0.5
USP11-207ENST00000478596 TMEM127O75204 238 aa11.9□□□□□ -0.5
USP11-207ENST00000478596 MELTFP08582 738 aa11.9□□□□□ -0.5
USP11-207ENST00000478596 ACAA1P09110 424 aaPredicted RBP11.9□□□□□ -0.5
USP11-207ENST00000478596 PSG2P11465 335 aa11.9□□□□□ -0.5
USP11-207ENST00000478596 BPIFB3P59826 476 aa11.9□□□□□ -0.5
USP11-207ENST00000478596 C2orf76Q3KRA6 126 aa11.9□□□□□ -0.5
USP11-207ENST00000478596 TMEM155Q4W5P6 130 aa11.9□□□□□ -0.5
USP11-207ENST00000478596 PAN3Q58A45 887 aaKnown RBP11.9□□□□□ -0.5
USP11-207ENST00000478596 ELP2Q6IA86 826 aa11.9□□□□□ -0.5
USP11-207ENST00000478596 ASCL4Q6XD76 172 aa11.9□□□□□ -0.5
USP11-207ENST00000478596 LYPD6Q86Y78 171 aa11.9□□□□□ -0.5
USP11-207ENST00000478596 FAM216BQ8N7L0 139 aa11.9□□□□□ -0.5
USP11-207ENST00000478596 SAMD12Q8N8I0 201 aa11.9□□□□□ -0.5
USP11-207ENST00000478596 DYNC2LI1Q8TCX1 351 aa11.9□□□□□ -0.5
USP11-207ENST00000478596 ACOT12Q8WYK0 555 aa11.9□□□□□ -0.5
USP11-207ENST00000478596 ST8SIA4Q92187 359 aa11.9□□□□□ -0.5
USP11-207ENST00000478596 MRPS24Q96EL2 167 aaKnown RBP11.9□□□□□ -0.5
USP11-207ENST00000478596 NEDD4LQ96PU5 975 aa11.9□□□□□ -0.5
USP11-207ENST00000478596 BARHL1Q9BZE3 327 aa11.9□□□□□ -0.5
USP11-207ENST00000478596 C16orf95Q9H693 158 aa11.9□□□□□ -0.5
USP11-207ENST00000478596 PATZ1Q9HBE1 687 aaKnown RBP11.9□□□□□ -0.5
USP11-207ENST00000478596 MIOXQ9UGB7 285 aa11.9□□□□□ -0.5
USP11-207ENST00000478596 OR5V1Q9UGF6 321 aa11.9□□□□□ -0.5
USP11-207ENST00000478596 RAB22AQ9UL26 194 aa11.9□□□□□ -0.5
USP11-207ENST00000478596 DOCK11Q5JSL3 2073 aa11.9□□□□□ -0.51
USP11-207ENST00000478596 IGKV1D-17A0A075B6S4 117 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms