RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 HTR3BO95264 441 aa4.64□□□□□ -1.67
HDAC3-206ENST00000471968 CA1P00915 261 aaPredicted RBP4.64□□□□□ -1.67
HDAC3-206ENST00000471968 CD14P08571 375 aa4.64□□□□□ -1.67
HDAC3-206ENST00000471968 FGF4P08620 206 aa4.64□□□□□ -1.67
HDAC3-206ENST00000471968 CD247P20963 164 aa4.64□□□□□ -1.67
HDAC3-206ENST00000471968 ERP29P30040 261 aaKnown RBP4.64□□□□□ -1.67
HDAC3-206ENST00000471968 RBM34P42696 430 aaKnown RBP4.64□□□□□ -1.67
HDAC3-206ENST00000471968 IFFO1Q0D2I5 559 aa4.64□□□□□ -1.67
HDAC3-206ENST00000471968 FHL1Q13642 323 aa4.64□□□□□ -1.67
HDAC3-206ENST00000471968 CDK5R1Q15078 307 aa4.64□□□□□ -1.67
HDAC3-206ENST00000471968 RGNQ15493 299 aa4.64□□□□□ -1.67
HDAC3-206ENST00000471968 LTC4SQ16873 150 aa4.64□□□□□ -1.67
HDAC3-206ENST00000471968 C17orf58Q2M2W7 97 aa4.64□□□□□ -1.67
HDAC3-206ENST00000471968 CEACAM21Q3KPI0 293 aa4.64□□□□□ -1.67
HDAC3-206ENST00000471968 SLC36A3Q495N2 470 aa4.64□□□□□ -1.67
HDAC3-206ENST00000471968 REEP3Q6NUK4 255 aa4.64□□□□□ -1.67
HDAC3-206ENST00000471968 DNM1P34Q6PK57 102 aa4.64□□□□□ -1.67
HDAC3-206ENST00000471968 CD200R1LQ6Q8B3 271 aa4.64□□□□□ -1.67
HDAC3-206ENST00000471968 GSG1LQ6UXU4 331 aa4.64□□□□□ -1.67
HDAC3-206ENST00000471968 PTCHD4Q6ZW05 846 aa4.64□□□□□ -1.67
HDAC3-206ENST00000471968 FAM57BQ71RH2 274 aa4.64□□□□□ -1.67
HDAC3-206ENST00000471968 TRMT10CQ7L0Y3 403 aaKnown RBP4.64□□□□□ -1.67
HDAC3-206ENST00000471968 FAM122BQ7Z309 247 aa4.64□□□□□ -1.67
HDAC3-206ENST00000471968 PPP1R27Q86WC6 154 aa4.64□□□□□ -1.67
HDAC3-206ENST00000471968 CCDC63Q8NA47 563 aa4.64□□□□□ -1.67
HDAC3-206ENST00000471968 BVESQ8NE79 360 aa4.64□□□□□ -1.67
HDAC3-206ENST00000471968 LFNGQ8NES3 379 aa4.64□□□□□ -1.67
HDAC3-206ENST00000471968 UBLCP1Q8WVY7 318 aaPredicted RBP4.64□□□□□ -1.67
HDAC3-206ENST00000471968 RASSF5Q8WWW0 418 aa4.64□□□□□ -1.67
HDAC3-206ENST00000471968 CORO2AQ92828 525 aa4.64□□□□□ -1.67
HDAC3-206ENST00000471968 SNAPC3Q92966 411 aa4.64□□□□□ -1.67
HDAC3-206ENST00000471968 EMG1Q92979 244 aaKnown RBP4.64□□□□□ -1.67
HDAC3-206ENST00000471968 FAM210BQ96KR6 192 aa4.64□□□□□ -1.67
HDAC3-206ENST00000471968 KCNJ15Q99712 375 aa4.64□□□□□ -1.67
HDAC3-206ENST00000471968 C6orf62Q9GZU0 229 aaPredicted RBP4.64□□□□□ -1.67
HDAC3-206ENST00000471968 FNDC4Q9H6D8 234 aaPredicted RBP4.64□□□□□ -1.67
HDAC3-206ENST00000471968 SRA1Q9HD15 236 aaKnown RBP4.64□□□□□ -1.67
HDAC3-206ENST00000471968 Q9N2K0 584 aa4.64□□□□□ -1.67
HDAC3-206ENST00000471968 CENPMQ9NSP4 180 aa4.64□□□□□ -1.67
HDAC3-206ENST00000471968 NINJ2Q9NZG7 142 aa4.64□□□□□ -1.67
HDAC3-206ENST00000471968 ZNF319Q9P2F9 582 aa4.64□□□□□ -1.67
HDAC3-206ENST00000471968 RNF150Q9ULK6 438 aa4.64□□□□□ -1.67
HDAC3-206ENST00000471968 POLDIP2Q9Y2S7 368 aa4.64□□□□□ -1.67
HDAC3-206ENST00000471968 OR5B21A6NL26 309 aa4.63□□□□□ -1.67
HDAC3-206ENST00000471968 SMIM23A6NLE4 172 aa4.63□□□□□ -1.67
HDAC3-206ENST00000471968 SERPINB7O75635 380 aa4.63□□□□□ -1.67
HDAC3-206ENST00000471968 HAND1O96004 215 aa4.63□□□□□ -1.67
HDAC3-206ENST00000471968 IFI30P13284 250 aa4.63□□□□□ -1.67
HDAC3-206ENST00000471968 CBLN1P23435 193 aa4.63□□□□□ -1.67
HDAC3-206ENST00000471968 NPY1RP25929 384 aa4.63□□□□□ -1.67
HDAC3-206ENST00000471968 CRABP1P29762 137 aa4.63□□□□□ -1.67
HDAC3-206ENST00000471968 CX3CR1P49238 355 aa4.63□□□□□ -1.67
HDAC3-206ENST00000471968 KRTAP10-4P60372 401 aaPredicted RBP4.63□□□□□ -1.67
HDAC3-206ENST00000471968 ERVFC1-1P60608 527 aa4.63□□□□□ -1.67
HDAC3-206ENST00000471968 CDK6Q00534 326 aa4.63□□□□□ -1.67
HDAC3-206ENST00000471968 BNIP1Q12981 228 aa4.63□□□□□ -1.67
HDAC3-206ENST00000471968 C5orf64Q2M2E5 130 aa4.63□□□□□ -1.67
HDAC3-206ENST00000471968 ODF3L2Q3SX64 289 aa4.63□□□□□ -1.67
HDAC3-206ENST00000471968 SLX4IPQ5VYV7 408 aa4.63□□□□□ -1.67
HDAC3-206ENST00000471968 ZNF343Q6P1L6 599 aa4.63□□□□□ -1.67
HDAC3-206ENST00000471968 BTNL8Q6UX41 500 aa4.63□□□□□ -1.67
HDAC3-206ENST00000471968 RBPMS2Q6ZRY4 209 aaKnown RBP4.63□□□□□ -1.67
HDAC3-206ENST00000471968 OAFQ86UD1 273 aa4.63□□□□□ -1.67
HDAC3-206ENST00000471968 LCA5Q86VQ0 697 aa4.63□□□□□ -1.67
HDAC3-206ENST00000471968 KIRREL3Q8IZU9 778 aa4.63□□□□□ -1.67
HDAC3-206ENST00000471968 NECAP1Q8NC96 275 aa4.63□□□□□ -1.67
HDAC3-206ENST00000471968 OR5A2Q8NGI9 324 aa4.63□□□□□ -1.67
HDAC3-206ENST00000471968 OR13C2Q8NGS9 318 aa4.63□□□□□ -1.67
HDAC3-206ENST00000471968 TSPEARQ8WU66 669 aa4.63□□□□□ -1.67
HDAC3-206ENST00000471968 RTN4IP1Q8WWV3 396 aaPredicted RBP4.63□□□□□ -1.67
HDAC3-206ENST00000471968 BPIFA2Q96DR5 249 aa4.63□□□□□ -1.67
HDAC3-206ENST00000471968 RITA1Q96K30 269 aa4.63□□□□□ -1.67
HDAC3-206ENST00000471968 PPP1R36Q96LQ0 422 aa4.63□□□□□ -1.67
HDAC3-206ENST00000471968 FYTTD1Q96QD9 318 aaKnown RBP4.63□□□□□ -1.67
HDAC3-206ENST00000471968 BRD7Q9NPI1 651 aa4.63□□□□□ -1.67
HDAC3-206ENST00000471968 BATF3Q9NR55 127 aa4.63□□□□□ -1.67
HDAC3-206ENST00000471968 ZNF221Q9UK13 617 aa4.63□□□□□ -1.67
HDAC3-206ENST00000471968 A0A1B0GW64 132 aa4.62□□□□□ -1.67
HDAC3-206ENST00000471968 ZNF729A6NN14 1252 aaPredicted RBP4.62□□□□□ -1.67
HDAC3-206ENST00000471968 F8VVB4 439 aa4.62□□□□□ -1.67
HDAC3-206ENST00000471968 F8VWA3 439 aa4.62□□□□□ -1.67
HDAC3-206ENST00000471968 PRODHO43272 600 aa4.62□□□□□ -1.67
HDAC3-206ENST00000471968 MIFP14174 115 aa4.62□□□□□ -1.67
HDAC3-206ENST00000471968 IFNA8P32881 189 aa4.62□□□□□ -1.67
HDAC3-206ENST00000471968 CDKN2AP42771 156 aaKnown RBP4.62□□□□□ -1.67
HDAC3-206ENST00000471968 OR3A1P47881 315 aa4.62□□□□□ -1.67
HDAC3-206ENST00000471968 IDH3AP50213 366 aa4.62□□□□□ -1.67
HDAC3-206ENST00000471968 ERVK11-1P61568 191 aa4.62□□□□□ -1.67
HDAC3-206ENST00000471968 RPS27AP62979 156 aaKnown RBP4.62□□□□□ -1.67
HDAC3-206ENST00000471968 CX3CL1P78423 397 aa4.62□□□□□ -1.67
HDAC3-206ENST00000471968 AESQ08117 197 aa4.62□□□□□ -1.67
HDAC3-206ENST00000471968 ZNF124Q15973 351 aa4.62□□□□□ -1.67
HDAC3-206ENST00000471968 AKIRIN2Q53H80 203 aa4.62□□□□□ -1.67
HDAC3-206ENST00000471968 PLCXD3Q63HM9 321 aa4.62□□□□□ -1.67
HDAC3-206ENST00000471968 MOB3CQ70IA8 216 aa4.62□□□□□ -1.67
HDAC3-206ENST00000471968 DCXRQ7Z4W1 244 aa4.62□□□□□ -1.67
HDAC3-206ENST00000471968 APRG1Q8IVJ8 170 aa4.62□□□□□ -1.67
HDAC3-206ENST00000471968 POC5Q8NA72 575 aa4.62□□□□□ -1.67
HDAC3-206ENST00000471968 DNAAF1Q8NEP3 725 aa4.62□□□□□ -1.67
HDAC3-206ENST00000471968 GPR32P1Q8NGA4 272 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms