RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 FAM106CPP0CH98 169 aa10.57□□□□□ -0.72
CPSF4-210ENST00000469897 DBTP11182 482 aaKnown RBP10.57□□□□□ -0.72
CPSF4-210ENST00000469897 LTC4SQ16873 150 aa10.57□□□□□ -0.72
CPSF4-210ENST00000469897 ZNF691Q5VV52 312 aa10.57□□□□□ -0.72
CPSF4-210ENST00000469897 LPCAT4Q643R3 524 aa10.57□□□□□ -0.72
CPSF4-210ENST00000469897 SATL1Q86VE3 508 aa10.57□□□□□ -0.72
CPSF4-210ENST00000469897 SYS1Q8N2H4 156 aa10.57□□□□□ -0.72
CPSF4-210ENST00000469897 PARP16Q8N5Y8 322 aa10.57□□□□□ -0.72
CPSF4-210ENST00000469897 OR51T1Q8NGJ9 327 aa10.57□□□□□ -0.72
CPSF4-210ENST00000469897 OR13A1Q8NGR1 328 aa10.57□□□□□ -0.72
CPSF4-210ENST00000469897 OR9G1Q8NH87 305 aa10.57□□□□□ -0.72
CPSF4-210ENST00000469897 OR5AK2Q8NH90 309 aa10.57□□□□□ -0.72
CPSF4-210ENST00000469897 RHOXF1Q8NHV9 184 aa10.57□□□□□ -0.72
CPSF4-210ENST00000469897 CNIH3Q8TBE1 160 aa10.57□□□□□ -0.72
CPSF4-210ENST00000469897 MRPL48Q96GC5 212 aaKnown RBP10.57□□□□□ -0.72
CPSF4-210ENST00000469897 KIRREL1Q96J84 757 aa10.57□□□□□ -0.72
CPSF4-210ENST00000469897 BARHL1Q9BZE3 327 aa10.57□□□□□ -0.72
CPSF4-210ENST00000469897 ERVK13-1Q9NX77 482 aa10.57□□□□□ -0.72
CPSF4-210ENST00000469897 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.57□□□□□ -0.72
CPSF4-210ENST00000469897 KIF25Q9UIL4 384 aa10.57□□□□□ -0.72
CPSF4-210ENST00000469897 TRAV39A0A0B4J263 110 aa10.56□□□□□ -0.72
CPSF4-210ENST00000469897 TRAV24A0A0B4J272 114 aa10.56□□□□□ -0.72
CPSF4-210ENST00000469897 J3QR06 171 aa10.56□□□□□ -0.72
CPSF4-210ENST00000469897 FADS2O95864 444 aaKnown RBP10.56□□□□□ -0.72
CPSF4-210ENST00000469897 MPIG6BO95866 241 aa10.56□□□□□ -0.72
CPSF4-210ENST00000469897 PF4P02776 101 aa10.56□□□□□ -0.72
CPSF4-210ENST00000469897 C21orf33P30042 268 aaPredicted RBP10.56□□□□□ -0.72
CPSF4-210ENST00000469897 SOX2P48431 317 aa10.56□□□□□ -0.72
CPSF4-210ENST00000469897 MTNR1BP49286 362 aa10.56□□□□□ -0.72
CPSF4-210ENST00000469897 GTF2A1P52655 376 aaPredicted RBP10.56□□□□□ -0.72
CPSF4-210ENST00000469897 GBX2P52951 348 aaPredicted RBP10.56□□□□□ -0.72
CPSF4-210ENST00000469897 DIAPH2-AS1Q14236 149 aa10.56□□□□□ -0.72
CPSF4-210ENST00000469897 ZSCAN26Q16670 478 aa10.56□□□□□ -0.72
CPSF4-210ENST00000469897 PAN3Q58A45 887 aaKnown RBP10.56□□□□□ -0.72
CPSF4-210ENST00000469897 OR4X2Q8NGF9 303 aa10.56□□□□□ -0.72
CPSF4-210ENST00000469897 OR10K1Q8NGX5 313 aa10.56□□□□□ -0.72
CPSF4-210ENST00000469897 TSEN15Q8WW01 171 aaKnown RBP10.56□□□□□ -0.72
CPSF4-210ENST00000469897 Q96MT0 163 aa10.56□□□□□ -0.72
CPSF4-210ENST00000469897 MYCBPQ99417 103 aaPredicted RBP10.56□□□□□ -0.72
CPSF4-210ENST00000469897 GPER1Q99527 375 aa10.56□□□□□ -0.72
CPSF4-210ENST00000469897 SLC29A1Q99808 456 aa10.56□□□□□ -0.72
CPSF4-210ENST00000469897 CALYQ9NYX4 217 aa10.56□□□□□ -0.72
CPSF4-210ENST00000469897 PSG11Q9UQ72 335 aa10.56□□□□□ -0.72
CPSF4-210ENST00000469897 FAM90A18PA6NE21 464 aa10.55□□□□□ -0.72
CPSF4-210ENST00000469897 FAM90A16PA6NEW6 464 aa10.55□□□□□ -0.72
CPSF4-210ENST00000469897 FAM90A20PA6NIJ5 464 aa10.55□□□□□ -0.72
CPSF4-210ENST00000469897 TMEM212A6NML5 194 aa10.55□□□□□ -0.72
CPSF4-210ENST00000469897 FAM90A9PA6NNJ1 464 aa10.55□□□□□ -0.72
CPSF4-210ENST00000469897 FAM90A12PA8MX19 464 aa10.55□□□□□ -0.72
CPSF4-210ENST00000469897 FAM90A5PA8MXJ8 464 aa10.55□□□□□ -0.72
CPSF4-210ENST00000469897 OOSP1A8MZH6 123 aa10.55□□□□□ -0.72
CPSF4-210ENST00000469897 GABRPO00591 440 aa10.55□□□□□ -0.72
CPSF4-210ENST00000469897 MAGEB3O15480 346 aa10.55□□□□□ -0.72
CPSF4-210ENST00000469897 SNRNP70P08621 437 aaKnown RBP10.55□□□□□ -0.72
CPSF4-210ENST00000469897 RPSAP08865 295 aaKnown RBP10.55□□□□□ -0.72
CPSF4-210ENST00000469897 FAM90A15PP0C7V4 464 aa10.55□□□□□ -0.72
CPSF4-210ENST00000469897 FAM90A13PP0C7W8 464 aa10.55□□□□□ -0.72
CPSF4-210ENST00000469897 FAM90A14PP0C7W9 464 aa10.55□□□□□ -0.72
CPSF4-210ENST00000469897 FAM90A24PP0C7X0 464 aa10.55□□□□□ -0.72
CPSF4-210ENST00000469897 RAB3AP20336 220 aa10.55□□□□□ -0.72
CPSF4-210ENST00000469897 GLP1RP43220 463 aa10.55□□□□□ -0.72
CPSF4-210ENST00000469897 HNF4GQ14541 408 aa10.55□□□□□ -0.72
CPSF4-210ENST00000469897 PIGYQ3MUY2 71 aa10.55□□□□□ -0.72
CPSF4-210ENST00000469897 DEFB121Q5J5C9 76 aa10.55□□□□□ -0.72
CPSF4-210ENST00000469897 KHDC1LQ5JSQ8 128 aa10.55□□□□□ -0.72
CPSF4-210ENST00000469897 ELP2Q6IA86 826 aa10.55□□□□□ -0.72
CPSF4-210ENST00000469897 CCDC144NLQ6NUI1 221 aa10.55□□□□□ -0.72
CPSF4-210ENST00000469897 THNSL2Q86YJ6 484 aa10.55□□□□□ -0.72
CPSF4-210ENST00000469897 PXT1Q8NFP0 134 aa10.55□□□□□ -0.72
CPSF4-210ENST00000469897 OR51A2Q8NGJ7 313 aa10.55□□□□□ -0.72
CPSF4-210ENST00000469897 OR52I1Q8NGK6 324 aa10.55□□□□□ -0.72
CPSF4-210ENST00000469897 PLPPR1Q8TBJ4 325 aa10.55□□□□□ -0.72
CPSF4-210ENST00000469897 MRGPRDQ8TDS7 321 aa10.55□□□□□ -0.72
CPSF4-210ENST00000469897 TNFAIP8L1Q8WVP5 186 aa10.55□□□□□ -0.72
CPSF4-210ENST00000469897 TOMM40LQ969M1 308 aa10.55□□□□□ -0.72
CPSF4-210ENST00000469897 RPEQ96AT9 228 aa10.55□□□□□ -0.72
CPSF4-210ENST00000469897 INPP5EQ9NRR6 644 aa10.55□□□□□ -0.72
CPSF4-210ENST00000469897 IDI2-AS1Q9NZ38 188 aa10.55□□□□□ -0.72
CPSF4-210ENST00000469897 ZNF581Q9P0T4 197 aa10.55□□□□□ -0.72
CPSF4-210ENST00000469897 ING4Q9UNL4 249 aa10.55□□□□□ -0.72
CPSF4-210ENST00000469897 LOC100130705A0A1B0GUX0 176 aa10.54□□□□□ -0.72
CPSF4-210ENST00000469897 M0QZK8 103 aa10.54□□□□□ -0.72
CPSF4-210ENST00000469897 MPZL2O60487 215 aa10.54□□□□□ -0.72
CPSF4-210ENST00000469897 HTR3BO95264 441 aa10.54□□□□□ -0.72
CPSF4-210ENST00000469897 CCDC159P0C7I6 412 aa10.54□□□□□ -0.72
CPSF4-210ENST00000469897 GNG10P50151 68 aa10.54□□□□□ -0.72
CPSF4-210ENST00000469897 RAB40BQ12829 278 aa10.54□□□□□ -0.72
CPSF4-210ENST00000469897 MRPL28Q13084 256 aaKnown RBP10.54□□□□□ -0.72
CPSF4-210ENST00000469897 HES1Q14469 280 aa10.54□□□□□ -0.72
CPSF4-210ENST00000469897 RSU1Q15404 277 aa10.54□□□□□ -0.72
CPSF4-210ENST00000469897 ZFP1Q6P2D0 407 aa10.54□□□□□ -0.72
CPSF4-210ENST00000469897 ZNF329Q86UD4 541 aa10.54□□□□□ -0.72
CPSF4-210ENST00000469897 OSR2Q8N2R0 312 aa10.54□□□□□ -0.72
CPSF4-210ENST00000469897 DRAM1Q8N682 238 aa10.54□□□□□ -0.72
CPSF4-210ENST00000469897 OR56B4Q8NH76 319 aa10.54□□□□□ -0.72
CPSF4-210ENST00000469897 FAM192AQ9GZU8 254 aa10.54□□□□□ -0.72
CPSF4-210ENST00000469897 NCOR1P1Q9H4R4 102 aa10.54□□□□□ -0.72
CPSF4-210ENST00000469897 FAM118AQ9NWS6 357 aa10.54□□□□□ -0.72
CPSF4-210ENST00000469897 TAS2R4Q9NYW5 299 aa10.54□□□□□ -0.72
CPSF4-210ENST00000469897 ZNF281Q9Y2X9 895 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 172.3 ms