RNA–Protein interactions for RNA: ENST00000467378.1

USP11-205, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 696 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-205ENST00000467378 FAM90A18PA6NE21 464 aa15.69■□□□□ 0.1
USP11-205ENST00000467378 FAM90A16PA6NEW6 464 aa15.69■□□□□ 0.1
USP11-205ENST00000467378 FAM90A20PA6NIJ5 464 aa15.69■□□□□ 0.1
USP11-205ENST00000467378 FAM90A8PA6NJQ4 464 aa15.69■□□□□ 0.1
USP11-205ENST00000467378 FAM90A7PA6NKC0 464 aa15.69■□□□□ 0.1
USP11-205ENST00000467378 NOTOA8MTQ0 251 aa15.69■□□□□ 0.1
USP11-205ENST00000467378 FAM90A22PA8MWA6 464 aa15.69■□□□□ 0.1
USP11-205ENST00000467378 FAM90A12PA8MX19 464 aa15.69■□□□□ 0.1
USP11-205ENST00000467378 FAM90A5PA8MXJ8 464 aa15.69■□□□□ 0.1
USP11-205ENST00000467378 FAM90A23PA8MXZ1 464 aa15.69■□□□□ 0.1
USP11-205ENST00000467378 OR7C1O76099 320 aaPredicted RBP15.69■□□□□ 0.1
USP11-205ENST00000467378 MPIG6BO95866 241 aa15.69■□□□□ 0.1
USP11-205ENST00000467378 CSN2P05814 226 aa15.69■□□□□ 0.1
USP11-205ENST00000467378 CLEC2LP0C7M8 214 aa15.69■□□□□ 0.1
USP11-205ENST00000467378 FAM90A15PP0C7V4 464 aa15.69■□□□□ 0.1
USP11-205ENST00000467378 FAM90A13PP0C7W8 464 aa15.69■□□□□ 0.1
USP11-205ENST00000467378 FAM90A14PP0C7W9 464 aa15.69■□□□□ 0.1
USP11-205ENST00000467378 FAM90A24PP0C7X0 464 aa15.69■□□□□ 0.1
USP11-205ENST00000467378 MMP9P14780 707 aa15.69■□□□□ 0.1
USP11-205ENST00000467378 ERP29P30040 261 aaKnown RBP15.69■□□□□ 0.1
USP11-205ENST00000467378 EDDM3BP56851 147 aa15.69■□□□□ 0.1
USP11-205ENST00000467378 RPS27AP62979 156 aaKnown RBP15.69■□□□□ 0.1
USP11-205ENST00000467378 C2orf76Q3KRA6 126 aa15.69■□□□□ 0.1
USP11-205ENST00000467378 OR2W3Q7Z3T1 314 aa15.69■□□□□ 0.1
USP11-205ENST00000467378 FAM185AQ8N0U4 392 aa15.69■□□□□ 0.1
USP11-205ENST00000467378 TEX29Q8N6K0 151 aa15.69■□□□□ 0.1
USP11-205ENST00000467378 TPRX1Q8N7U7 411 aa15.69■□□□□ 0.1
USP11-205ENST00000467378 SUMF2Q8NBJ7 301 aa15.69■□□□□ 0.1
USP11-205ENST00000467378 FAM3DQ96BQ1 224 aa15.69■□□□□ 0.1
USP11-205ENST00000467378 WDFY2Q96P53 400 aa15.69■□□□□ 0.1
USP11-205ENST00000467378 A0A1W2PQ09 198 aa15.68■□□□□ 0.1
USP11-205ENST00000467378 AIPO00170 330 aa15.68■□□□□ 0.1
USP11-205ENST00000467378 LDLRAD4O15165 306 aa15.68■□□□□ 0.1
USP11-205ENST00000467378 FSHBP01225 129 aa15.68■□□□□ 0.1
USP11-205ENST00000467378 RANBP1P43487 201 aa15.68■□□□□ 0.1
USP11-205ENST00000467378 LSM3P62310 102 aaKnown RBP15.68■□□□□ 0.1
USP11-205ENST00000467378 MXD1Q05195 221 aa15.68■□□□□ 0.1
USP11-205ENST00000467378 EDDM3AQ14507 147 aa15.68■□□□□ 0.1
USP11-205ENST00000467378 PAN3Q58A45 887 aaKnown RBP15.68■□□□□ 0.1
USP11-205ENST00000467378 ANKRD13BQ86YJ7 626 aa15.68■□□□□ 0.1
USP11-205ENST00000467378 BPIFB2Q8N4F0 458 aa15.68■□□□□ 0.1
USP11-205ENST00000467378 KIR3DL3Q8N743 410 aa15.68■□□□□ 0.1
USP11-205ENST00000467378 Q8N7P7 452 aa15.68■□□□□ 0.1
USP11-205ENST00000467378 UPRTQ96BW1 309 aa15.68■□□□□ 0.1
USP11-205ENST00000467378 COQ2Q96H96 371 aa15.68■□□□□ 0.1
USP11-205ENST00000467378 SLC6A7Q99884 636 aa15.68■□□□□ 0.1
USP11-205ENST00000467378 TM2D1Q9BX74 207 aa15.68■□□□□ 0.1
USP11-205ENST00000467378 ESM1Q9NQ30 184 aa15.68■□□□□ 0.1
USP11-205ENST00000467378 FBLN5Q9UBX5 448 aa15.68■□□□□ 0.1
USP11-205ENST00000467378 KPTNQ9Y664 436 aa15.68■□□□□ 0.1
USP11-205ENST00000467378 VWFP04275 2813 aa15.68■□□□□ 0.1
USP11-205ENST00000467378 KIAA2026Q5HYC2 2103 aa15.67■□□□□ 0.1
USP11-205ENST00000467378 TOX4O94842 621 aa15.67■□□□□ 0.1
USP11-205ENST00000467378 HKR1P10072 659 aa15.67■□□□□ 0.1
USP11-205ENST00000467378 SLC2A2P11168 524 aaPredicted RBP15.67■□□□□ 0.1
USP11-205ENST00000467378 MEF2CQ06413 473 aaPredicted RBP15.67■□□□□ 0.1
USP11-205ENST00000467378 AESQ08117 197 aa15.67■□□□□ 0.1
USP11-205ENST00000467378 ZNF273Q14593 569 aa15.67■□□□□ 0.1
USP11-205ENST00000467378 KLF17Q5JT82 389 aaPredicted RBP15.67■□□□□ 0.1
USP11-205ENST00000467378 ATAD3CQ5T2N8 411 aa15.67■□□□□ 0.1
USP11-205ENST00000467378 SIGIRRQ6IA17 410 aa15.67■□□□□ 0.1
USP11-205ENST00000467378 SLC16A12Q6ZSM3 486 aa15.67■□□□□ 0.1
USP11-205ENST00000467378 ZDHHC22Q8N966 263 aa15.67■□□□□ 0.1
USP11-205ENST00000467378 TBX15Q96SF7 602 aa15.67■□□□□ 0.1
USP11-205ENST00000467378 DPCDQ9BVM2 203 aaPredicted RBP15.67■□□□□ 0.1
USP11-205ENST00000467378 TMEM59Q9BXS4 323 aa15.67■□□□□ 0.1
USP11-205ENST00000467378 LPAR5Q9H1C0 372 aa15.67■□□□□ 0.1
USP11-205ENST00000467378 RCC2Q9P258 522 aaKnown RBP15.67■□□□□ 0.1
USP11-205ENST00000467378 ONECUT1Q9UBC0 465 aa15.67■□□□□ 0.1
USP11-205ENST00000467378 TMEM272A0A1B0GTI8 110 aa15.66■□□□□ 0.1
USP11-205ENST00000467378 HSPB6O14558 160 aa15.66■□□□□ 0.1
USP11-205ENST00000467378 GLIPR1P48060 266 aa15.66■□□□□ 0.1
USP11-205ENST00000467378 KCNJ3P48549 501 aa15.66■□□□□ 0.1
USP11-205ENST00000467378 P2RX3P56373 397 aa15.66■□□□□ 0.1
USP11-205ENST00000467378 UBA52P62987 128 aaKnown RBP15.66■□□□□ 0.1
USP11-205ENST00000467378 PLA2G7Q13093 441 aa15.66■□□□□ 0.1
USP11-205ENST00000467378 ATXN7L3Q14CW9 347 aaPredicted RBP15.66■□□□□ 0.1
USP11-205ENST00000467378 METTL11BQ5VVY1 283 aa15.66■□□□□ 0.1
USP11-205ENST00000467378 SFXN4Q6P4A7 337 aa15.66■□□□□ 0.1
USP11-205ENST00000467378 BRICD5Q6PL45 260 aa15.66■□□□□ 0.1
USP11-205ENST00000467378 C1orf122Q6ZSJ8 110 aa15.66■□□□□ 0.1
USP11-205ENST00000467378 TCF23Q7RTU1 214 aa15.66■□□□□ 0.1
USP11-205ENST00000467378 GPR141Q7Z602 305 aa15.66■□□□□ 0.1
USP11-205ENST00000467378 C11orf42Q8N5U0 333 aa15.66■□□□□ 0.1
USP11-205ENST00000467378 NANPQ8TBE9 248 aa15.66■□□□□ 0.1
USP11-205ENST00000467378 PLPPR1Q8TBJ4 325 aa15.66■□□□□ 0.1
USP11-205ENST00000467378 PCGF1Q9BSM1 259 aa15.66■□□□□ 0.1
USP11-205ENST00000467378 NAA50Q9GZZ1 169 aaKnown RBP15.66■□□□□ 0.1
USP11-205ENST00000467378 LIN7BQ9HAP6 207 aa15.66■□□□□ 0.1
USP11-205ENST00000467378 SPACA1Q9HBV2 294 aa15.66■□□□□ 0.1
USP11-205ENST00000467378 A0A0A6YYD4 124 aa15.65■□□□□ 0.1
USP11-205ENST00000467378 A0A0B4J203 849 aa15.65■□□□□ 0.1
USP11-205ENST00000467378 hADV38S2A0JD32 116 aa15.65■□□□□ 0.1
USP11-205ENST00000467378 FUOMA2VDF0 154 aa15.65■□□□□ 0.1
USP11-205ENST00000467378 M0R1W7 72 aa15.65■□□□□ 0.1
USP11-205ENST00000467378 CCL3L1P16619 93 aa15.65■□□□□ 0.1
USP11-205ENST00000467378 RPS19P39019 145 aaKnown RBP15.65■□□□□ 0.1
USP11-205ENST00000467378 RPL5P46777 297 aaKnown RBP15.65■□□□□ 0.1
USP11-205ENST00000467378 DLX6P56179 175 aa15.65■□□□□ 0.1
USP11-205ENST00000467378 PAX5Q02548 391 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms