RNA–Protein interactions for RNA: ENST00000462306.5

ERCC3-206, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 963 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-206ENST00000462306 LINC00596Q86U02 117 aa12.91□□□□□ -0.34
ERCC3-206ENST00000462306 SVOPQ8N4V2 548 aa12.91□□□□□ -0.34
ERCC3-206ENST00000462306 SLC25A28Q96A46 364 aa12.91□□□□□ -0.34
ERCC3-206ENST00000462306 MRPS24Q96EL2 167 aaKnown RBP12.91□□□□□ -0.34
ERCC3-206ENST00000462306 ING3Q9NXR8 418 aa12.91□□□□□ -0.34
ERCC3-206ENST00000462306 FAM96BQ9Y3D0 163 aa12.91□□□□□ -0.34
ERCC3-206ENST00000462306 MMP23AO75900 390 aa12.9□□□□□ -0.34
ERCC3-206ENST00000462306 OR7C1O76099 320 aaPredicted RBP12.9□□□□□ -0.34
ERCC3-206ENST00000462306 FBP1P09467 338 aa12.9□□□□□ -0.34
ERCC3-206ENST00000462306 COX7A1P24310 79 aa12.9□□□□□ -0.34
ERCC3-206ENST00000462306 IER3P46695 156 aa12.9□□□□□ -0.34
ERCC3-206ENST00000462306 TAF9Q16594 264 aa12.9□□□□□ -0.34
ERCC3-206ENST00000462306 MPV17LQ2QL34 196 aa12.9□□□□□ -0.34
ERCC3-206ENST00000462306 RSBN1Q5VWQ0 802 aaPredicted RBP12.9□□□□□ -0.34
ERCC3-206ENST00000462306 GLT8D1Q68CQ7 371 aa12.9□□□□□ -0.34
ERCC3-206ENST00000462306 TRAPPC6BQ86SZ2 158 aa12.9□□□□□ -0.34
ERCC3-206ENST00000462306 TMEM86BQ8N661 226 aa12.9□□□□□ -0.34
ERCC3-206ENST00000462306 SUMF2Q8NBJ7 301 aa12.9□□□□□ -0.34
ERCC3-206ENST00000462306 TMEM104Q8NE00 496 aa12.9□□□□□ -0.34
ERCC3-206ENST00000462306 PLPPR1Q8TBJ4 325 aa12.9□□□□□ -0.34
ERCC3-206ENST00000462306 C17orf50Q8WW18 174 aa12.9□□□□□ -0.34
ERCC3-206ENST00000462306 SSMEM1Q8WWF3 244 aa12.9□□□□□ -0.34
ERCC3-206ENST00000462306 FOXRED1Q96CU9 486 aaPredicted RBP12.9□□□□□ -0.34
ERCC3-206ENST00000462306 GFI1Q99684 422 aa12.9□□□□□ -0.34
ERCC3-206ENST00000462306 DPCDQ9BVM2 203 aaPredicted RBP12.9□□□□□ -0.34
ERCC3-206ENST00000462306 NCOR1P1Q9H4R4 102 aa12.9□□□□□ -0.34
ERCC3-206ENST00000462306 NDUFB11Q9NX14 153 aa12.9□□□□□ -0.34
ERCC3-206ENST00000462306 TAS2R3Q9NYW6 316 aa12.9□□□□□ -0.34
ERCC3-206ENST00000462306 ZNRD1Q9P1U0 126 aa12.9□□□□□ -0.34
ERCC3-206ENST00000462306 POMT1Q9Y6A1 747 aa12.9□□□□□ -0.34
ERCC3-206ENST00000462306 TRGV10A0A0A0MS01 117 aa12.89□□□□□ -0.35
ERCC3-206ENST00000462306 TMEM89A2RUT3 159 aa12.89□□□□□ -0.35
ERCC3-206ENST00000462306 ODF3BA8MYP8 253 aa12.89□□□□□ -0.35
ERCC3-206ENST00000462306 ARL6IP5O75915 188 aa12.89□□□□□ -0.35
ERCC3-206ENST00000462306 CLPXO76031 633 aa12.89□□□□□ -0.35
ERCC3-206ENST00000462306 IGHV4-59P01825 116 aa12.89□□□□□ -0.35
ERCC3-206ENST00000462306 CGB3P0DN86 165 aa12.89□□□□□ -0.35
ERCC3-206ENST00000462306 CGB7P0DN87 165 aa12.89□□□□□ -0.35
ERCC3-206ENST00000462306 KCNJ3P48549 501 aa12.89□□□□□ -0.35
ERCC3-206ENST00000462306 ACTG1P63261 375 aa12.89□□□□□ -0.35
ERCC3-206ENST00000462306 C16orf87Q6PH81 154 aa12.89□□□□□ -0.35
ERCC3-206ENST00000462306 CD200R1LQ6Q8B3 271 aa12.89□□□□□ -0.35
ERCC3-206ENST00000462306 OR11H6Q8NGC7 330 aa12.89□□□□□ -0.35
ERCC3-206ENST00000462306 BARHL1Q9BZE3 327 aa12.89□□□□□ -0.35
ERCC3-206ENST00000462306 CHIAQ9BZP6 476 aa12.89□□□□□ -0.35
ERCC3-206ENST00000462306 SLITRK2Q9H156 845 aa12.89□□□□□ -0.35
ERCC3-206ENST00000462306 BANF2Q9H503 90 aa12.89□□□□□ -0.35
ERCC3-206ENST00000462306 GHRLQ9UBU3 117 aa12.89□□□□□ -0.35
ERCC3-206ENST00000462306 KIF25Q9UIL4 384 aa12.89□□□□□ -0.35
ERCC3-206ENST00000462306 SESN1Q9Y6P5 492 aa12.89□□□□□ -0.35
ERCC3-206ENST00000462306 FAM90A8PA6NJQ4 464 aa12.88□□□□□ -0.35
ERCC3-206ENST00000462306 SLC22A1O15245 554 aa12.88□□□□□ -0.35
ERCC3-206ENST00000462306 CRTAPO75718 401 aaPredicted RBP12.88□□□□□ -0.35
ERCC3-206ENST00000462306 MGMTP16455 207 aa12.88□□□□□ -0.35
ERCC3-206ENST00000462306 C17orf58Q2M2W7 97 aa12.88□□□□□ -0.35
ERCC3-206ENST00000462306 ZNF773Q6PK81 442 aa12.88□□□□□ -0.35
ERCC3-206ENST00000462306 HEPN1Q6WQI6 88 aa12.88□□□□□ -0.35
ERCC3-206ENST00000462306 BEND2Q8NDZ0 799 aa12.88□□□□□ -0.35
ERCC3-206ENST00000462306 OR13D1Q8NGV5 346 aa12.88□□□□□ -0.35
ERCC3-206ENST00000462306 Q96M66 194 aa12.88□□□□□ -0.35
ERCC3-206ENST00000462306 SELENOIQ9C0D9 397 aa12.88□□□□□ -0.35
ERCC3-206ENST00000462306 TMEM133Q9H2Q1 129 aa12.88□□□□□ -0.35
ERCC3-206ENST00000462306 GAL3ST2Q9H3Q3 398 aa12.88□□□□□ -0.35
ERCC3-206ENST00000462306 TNFRSF19Q9NS68 423 aa12.88□□□□□ -0.35
ERCC3-206ENST00000462306 OR6C3Q9NZP0 311 aa12.88□□□□□ -0.35
ERCC3-206ENST00000462306 RCC2Q9P258 522 aaKnown RBP12.88□□□□□ -0.35
ERCC3-206ENST00000462306 KIAA2026Q5HYC2 2103 aa12.88□□□□□ -0.35
ERCC3-206ENST00000462306 MEIKINA0A087WXM9 373 aa12.87□□□□□ -0.35
ERCC3-206ENST00000462306 FAM90A10PA6NDY2 464 aa12.87□□□□□ -0.35
ERCC3-206ENST00000462306 FAM90A18PA6NE21 464 aa12.87□□□□□ -0.35
ERCC3-206ENST00000462306 FAM90A16PA6NEW6 464 aa12.87□□□□□ -0.35
ERCC3-206ENST00000462306 FAM90A20PA6NIJ5 464 aa12.87□□□□□ -0.35
ERCC3-206ENST00000462306 FAM90A7PA6NKC0 464 aa12.87□□□□□ -0.35
ERCC3-206ENST00000462306 FAM90A22PA8MWA6 464 aa12.87□□□□□ -0.35
ERCC3-206ENST00000462306 FAM90A12PA8MX19 464 aa12.87□□□□□ -0.35
ERCC3-206ENST00000462306 FAM90A5PA8MXJ8 464 aa12.87□□□□□ -0.35
ERCC3-206ENST00000462306 FAM90A23PA8MXZ1 464 aa12.87□□□□□ -0.35
ERCC3-206ENST00000462306 PAHP00439 452 aa12.87□□□□□ -0.35
ERCC3-206ENST00000462306 FAM90A15PP0C7V4 464 aa12.87□□□□□ -0.35
ERCC3-206ENST00000462306 FAM90A13PP0C7W8 464 aa12.87□□□□□ -0.35
ERCC3-206ENST00000462306 FAM90A14PP0C7W9 464 aa12.87□□□□□ -0.35
ERCC3-206ENST00000462306 FAM90A24PP0C7X0 464 aa12.87□□□□□ -0.35
ERCC3-206ENST00000462306 UBBP0CG47 229 aa12.87□□□□□ -0.35
ERCC3-206ENST00000462306 VSIG8P0DPA2 414 aa12.87□□□□□ -0.35
ERCC3-206ENST00000462306 HKR1P10072 659 aa12.87□□□□□ -0.35
ERCC3-206ENST00000462306 CDK2P24941 298 aa12.87□□□□□ -0.35
ERCC3-206ENST00000462306 CALRP27797 417 aaKnown RBP12.87□□□□□ -0.35
ERCC3-206ENST00000462306 HTR2CP28335 458 aa12.87□□□□□ -0.35
ERCC3-206ENST00000462306 GDNFP39905 211 aa12.87□□□□□ -0.35
ERCC3-206ENST00000462306 COMPP49747 757 aaPredicted RBP12.87□□□□□ -0.35
ERCC3-206ENST00000462306 KCTD21Q4G0X4 260 aa12.87□□□□□ -0.35
ERCC3-206ENST00000462306 LDLRAD2Q5SZI1 272 aa12.87□□□□□ -0.35
ERCC3-206ENST00000462306 ATAD3CQ5T2N8 411 aa12.87□□□□□ -0.35
ERCC3-206ENST00000462306 PRAMEF5Q5TYX0 476 aa12.87□□□□□ -0.35
ERCC3-206ENST00000462306 ZNF626Q68DY1 528 aa12.87□□□□□ -0.35
ERCC3-206ENST00000462306 BRICD5Q6PL45 260 aa12.87□□□□□ -0.35
ERCC3-206ENST00000462306 BAIAP2L2Q6UXY1 529 aa12.87□□□□□ -0.35
ERCC3-206ENST00000462306 LHFPL4Q7Z7J7 247 aa12.87□□□□□ -0.35
ERCC3-206ENST00000462306 OR13A1Q8NGR1 328 aa12.87□□□□□ -0.35
ERCC3-206ENST00000462306 FCGR1BQ92637 280 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 248.2 ms