RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 VASH2Q86V25 355 aa14.5□□□□□ -0.09
TCOF1-206ENST00000445265 ZADH2Q8N4Q0 377 aa14.5□□□□□ -0.09
TCOF1-206ENST00000445265 EIF4E3Q8N5X7 224 aaKnown RBP14.5□□□□□ -0.09
TCOF1-206ENST00000445265 DNASE2BQ8WZ79 361 aa14.5□□□□□ -0.09
TCOF1-206ENST00000445265 DYNLRB1Q9NP97 96 aa14.5□□□□□ -0.09
TCOF1-206ENST00000445265 MEOX1P50221 254 aa14.5□□□□□ -0.09
TCOF1-206ENST00000445265 IGFBP7Q16270 282 aa14.5□□□□□ -0.09
TCOF1-206ENST00000445265 ZNF468Q5VIY5 522 aaPredicted RBP14.5□□□□□ -0.09
TCOF1-206ENST00000445265 SPINK14Q6IE38 97 aa14.5□□□□□ -0.09
TCOF1-206ENST00000445265 POC1BQ8TC44 478 aa14.5□□□□□ -0.09
TCOF1-206ENST00000445265 FAM210BQ96KR6 192 aa14.5□□□□□ -0.09
TCOF1-206ENST00000445265 OSGIN2Q9Y236 505 aa14.5□□□□□ -0.09
TCOF1-206ENST00000445265 TIMM8BQ9Y5J9 83 aaPredicted RBP14.5□□□□□ -0.09
TCOF1-206ENST00000445265 hCG_1809904A0A1W2PP81 198 aa14.5□□□□□ -0.09
TCOF1-206ENST00000445265 A0A1W2PR64 198 aa14.5□□□□□ -0.09
TCOF1-206ENST00000445265 A0A1W2PRV1 198 aa14.5□□□□□ -0.09
TCOF1-206ENST00000445265 NAT1P18440 290 aa14.5□□□□□ -0.09
TCOF1-206ENST00000445265 ATP6V0CP27449 155 aa14.5□□□□□ -0.09
TCOF1-206ENST00000445265 PSG4Q00888 419 aa14.5□□□□□ -0.09
TCOF1-206ENST00000445265 ZNF92Q03936 586 aa14.5□□□□□ -0.09
TCOF1-206ENST00000445265 ATP6V1FQ16864 119 aa14.5□□□□□ -0.09
TCOF1-206ENST00000445265 TCF20Q9UGU0 1960 aaKnown RBP14.5□□□□□ -0.09
TCOF1-206ENST00000445265 NPIPB7O75200 414 aa14.49□□□□□ -0.09
TCOF1-206ENST00000445265 SLC25A6P12236 298 aa14.49□□□□□ -0.09
TCOF1-206ENST00000445265 TMEM241Q24JQ0 296 aa14.49□□□□□ -0.09
TCOF1-206ENST00000445265 TUSC5Q8IXB3 177 aa14.49□□□□□ -0.09
TCOF1-206ENST00000445265 TMEM18Q96B42 140 aa14.49□□□□□ -0.09
TCOF1-206ENST00000445265 LOC101059948A0A1B0GTJ6 334 aa14.49□□□□□ -0.09
TCOF1-206ENST00000445265 NPBWR1P48145 328 aa14.49□□□□□ -0.09
TCOF1-206ENST00000445265 Q96M66 194 aa14.49□□□□□ -0.09
TCOF1-206ENST00000445265 OR2W1Q9Y3N9 320 aa14.49□□□□□ -0.09
TCOF1-206ENST00000445265 HEXAP06865 529 aa14.49□□□□□ -0.09
TCOF1-206ENST00000445265 UBE2V2Q15819 145 aa14.49□□□□□ -0.09
TCOF1-206ENST00000445265 LINC00596Q86U02 117 aa14.49□□□□□ -0.09
TCOF1-206ENST00000445265 LDLRAD3Q86YD5 345 aa14.49□□□□□ -0.09
TCOF1-206ENST00000445265 POC1AQ8NBT0 407 aa14.49□□□□□ -0.09
TCOF1-206ENST00000445265 ZNF251Q9BRH9 671 aa14.49□□□□□ -0.09
TCOF1-206ENST00000445265 RSPO3Q9BXY4 272 aaPredicted RBP14.49□□□□□ -0.09
TCOF1-206ENST00000445265 KCNMB2Q9Y691 235 aa14.49□□□□□ -0.09
TCOF1-206ENST00000445265 TRAV14DV4A0A0A6YYC5 116 aa14.49□□□□□ -0.09
TCOF1-206ENST00000445265 IGKV1D-43A0A0B4J1Z2 117 aa14.49□□□□□ -0.09
TCOF1-206ENST00000445265 A0A1B0GU03 582 aa14.49□□□□□ -0.09
TCOF1-206ENST00000445265 LRRC30A6NM36 301 aa14.49□□□□□ -0.09
TCOF1-206ENST00000445265 B4DEV8 164 aa14.49□□□□□ -0.09
TCOF1-206ENST00000445265 APOA2P02652 100 aa14.49□□□□□ -0.09
TCOF1-206ENST00000445265 FGF5P12034 268 aa14.49□□□□□ -0.09
TCOF1-206ENST00000445265 TMEM50BP56557 158 aa14.49□□□□□ -0.09
TCOF1-206ENST00000445265 ZNF154Q13106 437 aa14.49□□□□□ -0.09
TCOF1-206ENST00000445265 BATFQ16520 125 aa14.49□□□□□ -0.09
TCOF1-206ENST00000445265 DAZAP1Q96EP5 407 aaKnown RBP14.49□□□□□ -0.09
TCOF1-206ENST00000445265 A0A1B0GTI1 187 aa14.48□□□□□ -0.09
TCOF1-206ENST00000445265 PRR19A6NJB7 356 aa14.48□□□□□ -0.09
TCOF1-206ENST00000445265 J3QT63 122 aa14.48□□□□□ -0.09
TCOF1-206ENST00000445265 NHLH2Q02577 135 aa14.48□□□□□ -0.09
TCOF1-206ENST00000445265 C10orf128Q5T292 105 aa14.48□□□□□ -0.09
TCOF1-206ENST00000445265 OR4A4PQ8NGN8 299 aa14.48□□□□□ -0.09
TCOF1-206ENST00000445265 SPSB2Q99619 263 aa14.48□□□□□ -0.09
TCOF1-206ENST00000445265 IGHV1-45A0A0A0MS14 117 aa14.48□□□□□ -0.09
TCOF1-206ENST00000445265 PITX3O75364 302 aa14.48□□□□□ -0.09
TCOF1-206ENST00000445265 NGBQ9NPG2 151 aa14.48□□□□□ -0.09
TCOF1-206ENST00000445265 OR10AD1Q8NGE0 317 aa14.48□□□□□ -0.09
TCOF1-206ENST00000445265 BORCS7Q96B45 105 aa14.48□□□□□ -0.09
TCOF1-206ENST00000445265 KIAA1456Q9P272 454 aa14.48□□□□□ -0.09
TCOF1-206ENST00000445265 FBLN5Q9UBX5 448 aa14.48□□□□□ -0.09
TCOF1-206ENST00000445265 CELA2AP08217 269 aa14.48□□□□□ -0.09
TCOF1-206ENST00000445265 ZNF90Q03938 601 aa14.48□□□□□ -0.09
TCOF1-206ENST00000445265 FFAR4Q5NUL3 377 aa14.48□□□□□ -0.09
TCOF1-206ENST00000445265 SLC16A13Q7RTY0 426 aa14.48□□□□□ -0.09
TCOF1-206ENST00000445265 RBMXL3Q8N7X1 1067 aaKnown RBP14.48□□□□□ -0.09
TCOF1-206ENST00000445265 OR10D4PQ8NGN7 298 aa14.48□□□□□ -0.09
TCOF1-206ENST00000445265 SLC25A28Q96A46 364 aa14.48□□□□□ -0.09
TCOF1-206ENST00000445265 MOB3AQ96BX8 217 aa14.48□□□□□ -0.09
TCOF1-206ENST00000445265 SIRT7Q9NRC8 400 aa14.48□□□□□ -0.09
TCOF1-206ENST00000445265 ANAPC1Q9H1A4 1944 aa14.47□□□□□ -0.09
TCOF1-206ENST00000445265 LOC105371267A0A1B0GV96 52 aa14.47□□□□□ -0.09
TCOF1-206ENST00000445265 RNF222A6NCQ9 220 aa14.47□□□□□ -0.09
TCOF1-206ENST00000445265 FAM90A10PA6NDY2 464 aa14.47□□□□□ -0.09
TCOF1-206ENST00000445265 FAM90A18PA6NE21 464 aa14.47□□□□□ -0.09
TCOF1-206ENST00000445265 FAM90A16PA6NEW6 464 aa14.47□□□□□ -0.09
TCOF1-206ENST00000445265 FAM90A20PA6NIJ5 464 aa14.47□□□□□ -0.09
TCOF1-206ENST00000445265 FAM90A8PA6NJQ4 464 aa14.47□□□□□ -0.09
TCOF1-206ENST00000445265 FAM90A7PA6NKC0 464 aa14.47□□□□□ -0.09
TCOF1-206ENST00000445265 FAM90A22PA8MWA6 464 aa14.47□□□□□ -0.09
TCOF1-206ENST00000445265 FAM90A12PA8MX19 464 aa14.47□□□□□ -0.09
TCOF1-206ENST00000445265 FAM90A5PA8MXJ8 464 aa14.47□□□□□ -0.09
TCOF1-206ENST00000445265 FAM90A23PA8MXZ1 464 aa14.47□□□□□ -0.09
TCOF1-206ENST00000445265 ZNF737O75373 536 aa14.47□□□□□ -0.09
TCOF1-206ENST00000445265 FAM90A15PP0C7V4 464 aa14.47□□□□□ -0.09
TCOF1-206ENST00000445265 FAM90A13PP0C7W8 464 aa14.47□□□□□ -0.09
TCOF1-206ENST00000445265 FAM90A14PP0C7W9 464 aa14.47□□□□□ -0.09
TCOF1-206ENST00000445265 FAM90A24PP0C7X0 464 aa14.47□□□□□ -0.09
TCOF1-206ENST00000445265 PPP1CBP62140 327 aa14.47□□□□□ -0.09
TCOF1-206ENST00000445265 BTNL8Q6UX41 500 aa14.47□□□□□ -0.09
TCOF1-206ENST00000445265 LURAP1Q96LR2 239 aa14.47□□□□□ -0.09
TCOF1-206ENST00000445265 RCC2Q9P258 522 aaKnown RBP14.47□□□□□ -0.09
TCOF1-206ENST00000445265 OPN1MWP04001 364 aa14.47□□□□□ -0.09
TCOF1-206ENST00000445265 OPN1MW2P0DN77 364 aa14.47□□□□□ -0.09
TCOF1-206ENST00000445265 OPN1MW3P0DN78 364 aa14.47□□□□□ -0.09
TCOF1-206ENST00000445265 TAS2R45P59539 299 aa14.47□□□□□ -0.09
TCOF1-206ENST00000445265 PLAC9Q5JTB6 97 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms