RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 DDOSTP39656 456 aa2.9□□□□□ -1.95
HMGB3P6-201ENST00000444896 RPS5P46782 204 aaKnown RBP2.9□□□□□ -1.95
HMGB3P6-201ENST00000444896 RFX3P48380 749 aa2.9□□□□□ -1.95
HMGB3P6-201ENST00000444896 CTBP2P56545 445 aa2.9□□□□□ -1.95
HMGB3P6-201ENST00000444896 OR2B6P58173 313 aa2.9□□□□□ -1.95
HMGB3P6-201ENST00000444896 ACTA2P62736 377 aa2.9□□□□□ -1.95
HMGB3P6-201ENST00000444896 RPS25P62851 125 aaKnown RBP2.9□□□□□ -1.95
HMGB3P6-201ENST00000444896 ACTG2P63267 376 aa2.9□□□□□ -1.95
HMGB3P6-201ENST00000444896 KLRB1Q12918 225 aa2.9□□□□□ -1.95
HMGB3P6-201ENST00000444896 BIKQ13323 160 aa2.9□□□□□ -1.95
HMGB3P6-201ENST00000444896 QPRTQ15274 297 aa2.9□□□□□ -1.95
HMGB3P6-201ENST00000444896 ELOCQ15369 112 aa2.9□□□□□ -1.95
HMGB3P6-201ENST00000444896 KLHL12Q53G59 568 aa2.9□□□□□ -1.95
HMGB3P6-201ENST00000444896 PYDC2Q56P42 97 aa2.9□□□□□ -1.95
HMGB3P6-201ENST00000444896 AADACL4Q5VUY2 407 aa2.9□□□□□ -1.95
HMGB3P6-201ENST00000444896 SMARCD3Q6STE5 483 aa2.9□□□□□ -1.95
HMGB3P6-201ENST00000444896 ZNF322Q6U7Q0 402 aaPredicted RBP2.9□□□□□ -1.95
HMGB3P6-201ENST00000444896 METAP1DQ6UB28 335 aaPredicted RBP2.9□□□□□ -1.95
HMGB3P6-201ENST00000444896 RAB43Q86YS6 212 aa2.9□□□□□ -1.95
HMGB3P6-201ENST00000444896 SLC35F2Q8IXU6 374 aa2.9□□□□□ -1.95
HMGB3P6-201ENST00000444896 PNKDQ8N490 385 aa2.9□□□□□ -1.95
HMGB3P6-201ENST00000444896 ACBD7Q8N6N7 88 aa2.9□□□□□ -1.95
HMGB3P6-201ENST00000444896 C19orf18Q8NEA5 215 aa2.9□□□□□ -1.95
HMGB3P6-201ENST00000444896 ATP6V1C2Q8NEY4 427 aa2.9□□□□□ -1.95
HMGB3P6-201ENST00000444896 TSTD1Q8NFU3 115 aa2.9□□□□□ -1.95
HMGB3P6-201ENST00000444896 OR6C4Q8NGE1 309 aa2.9□□□□□ -1.95
HMGB3P6-201ENST00000444896 OR52R1Q8NGF1 315 aa2.9□□□□□ -1.95
HMGB3P6-201ENST00000444896 OR4C6Q8NH72 309 aa2.9□□□□□ -1.95
HMGB3P6-201ENST00000444896 PFN4Q8NHR9 129 aa2.9□□□□□ -1.95
HMGB3P6-201ENST00000444896 CCL4L1Q8NHW4 92 aa2.9□□□□□ -1.95
HMGB3P6-201ENST00000444896 ENKURQ8TC29 256 aa2.9□□□□□ -1.95
HMGB3P6-201ENST00000444896 SLC37A2Q8TED4 501 aa2.9□□□□□ -1.95
HMGB3P6-201ENST00000444896 ACOT12Q8WYK0 555 aa2.9□□□□□ -1.95
HMGB3P6-201ENST00000444896 ITFG2Q969R8 447 aa2.9□□□□□ -1.95
HMGB3P6-201ENST00000444896 TMEM203Q969S6 136 aa2.9□□□□□ -1.95
HMGB3P6-201ENST00000444896 SEC22AQ96IW7 307 aa2.9□□□□□ -1.95
HMGB3P6-201ENST00000444896 BMFQ96LC9 184 aa2.9□□□□□ -1.95
HMGB3P6-201ENST00000444896 TMED9Q9BVK6 235 aa2.9□□□□□ -1.95
HMGB3P6-201ENST00000444896 SRRQ9GZT4 340 aa2.9□□□□□ -1.95
HMGB3P6-201ENST00000444896 SLC22A4Q9H015 551 aa2.9□□□□□ -1.95
HMGB3P6-201ENST00000444896 RERGLQ9H628 205 aa2.9□□□□□ -1.95
HMGB3P6-201ENST00000444896 PRTFDC1Q9NRG1 225 aa2.9□□□□□ -1.95
HMGB3P6-201ENST00000444896 CMC2Q9NRP2 79 aa2.9□□□□□ -1.95
HMGB3P6-201ENST00000444896 MAT2BQ9NZL9 334 aa2.9□□□□□ -1.95
HMGB3P6-201ENST00000444896 TP53TG5Q9Y2B4 290 aa2.9□□□□□ -1.95
HMGB3P6-201ENST00000444896 CAB39Q9Y376 341 aaPredicted RBP2.9□□□□□ -1.95
HMGB3P6-201ENST00000444896 CACNG2Q9Y698 323 aa2.9□□□□□ -1.95
HMGB3P6-201ENST00000444896 V9GYH0 126 aa2.9□□□□□ -1.95
HMGB3P6-201ENST00000444896 COL4A2P08572 1712 aa2.9□□□□□ -1.95
HMGB3P6-201ENST00000444896 CHD7Q9P2D1 2997 aa2.9□□□□□ -1.95
HMGB3P6-201ENST00000444896 MYO9BQ13459 2157 aa2.9□□□□□ -1.95
HMGB3P6-201ENST00000444896 ATG2BQ96BY7 2078 aa2.89□□□□□ -1.95
HMGB3P6-201ENST00000444896 SPTY2D1-AS1A0A0U1RR47 76 aa2.89□□□□□ -1.95
HMGB3P6-201ENST00000444896 A0A1B0GWA3 101 aa2.89□□□□□ -1.95
HMGB3P6-201ENST00000444896 A0A1W2PQL4 384 aaPredicted RBP2.89□□□□□ -1.95
HMGB3P6-201ENST00000444896 DAPL1A0PJW8 107 aa2.89□□□□□ -1.95
HMGB3P6-201ENST00000444896 GJE1A6NN92 205 aa2.89□□□□□ -1.95
HMGB3P6-201ENST00000444896 C12orf71A8MTZ7 269 aa2.89□□□□□ -1.95
HMGB3P6-201ENST00000444896 FAM25AB3EWG3 89 aa2.89□□□□□ -1.95
HMGB3P6-201ENST00000444896 FAM25CB3EWG5 89 aa2.89□□□□□ -1.95
HMGB3P6-201ENST00000444896 FAM25GB3EWG6 89 aa2.89□□□□□ -1.95
HMGB3P6-201ENST00000444896 BHLHE40O14503 412 aa2.89□□□□□ -1.95
HMGB3P6-201ENST00000444896 CDC42EP2O14613 210 aa2.89□□□□□ -1.95
HMGB3P6-201ENST00000444896 POLR1CO15160 346 aaPredicted RBP2.89□□□□□ -1.95
HMGB3P6-201ENST00000444896 CCNKO75909 580 aa2.89□□□□□ -1.95
HMGB3P6-201ENST00000444896 KCNK2O95069 426 aa2.89□□□□□ -1.95
HMGB3P6-201ENST00000444896 NDUFB2O95178 105 aa2.89□□□□□ -1.95
HMGB3P6-201ENST00000444896 NSA2O95478 260 aaKnown RBP2.89□□□□□ -1.95
HMGB3P6-201ENST00000444896 IGLV3-19P01714 112 aa2.89□□□□□ -1.95
HMGB3P6-201ENST00000444896 OPN1MWP04001 364 aa2.89□□□□□ -1.95
HMGB3P6-201ENST00000444896 IGHV4-34P06331 123 aa2.89□□□□□ -1.95
HMGB3P6-201ENST00000444896 GKN3PP0CG01 181 aa2.89□□□□□ -1.95
HMGB3P6-201ENST00000444896 OPN1MW2P0DN77 364 aa2.89□□□□□ -1.95
HMGB3P6-201ENST00000444896 OPN1MW3P0DN78 364 aa2.89□□□□□ -1.95
HMGB3P6-201ENST00000444896 HPGDP15428 266 aa2.89□□□□□ -1.95
HMGB3P6-201ENST00000444896 CELP19835 753 aa2.89□□□□□ -1.95
HMGB3P6-201ENST00000444896 RPS10P46783 165 aaKnown RBP2.89□□□□□ -1.95
HMGB3P6-201ENST00000444896 CAPZBP47756 277 aa2.89□□□□□ -1.95
HMGB3P6-201ENST00000444896 ZNF136P52737 540 aa2.89□□□□□ -1.95
HMGB3P6-201ENST00000444896 GBX2P52951 348 aaPredicted RBP2.89□□□□□ -1.95
HMGB3P6-201ENST00000444896 SELENOTP62341 195 aa2.89□□□□□ -1.95
HMGB3P6-201ENST00000444896 HOXC5Q00444 222 aa2.89□□□□□ -1.95
HMGB3P6-201ENST00000444896 FABP5Q01469 135 aa2.89□□□□□ -1.95
HMGB3P6-201ENST00000444896 UNC119Q13432 240 aa2.89□□□□□ -1.95
HMGB3P6-201ENST00000444896 ARFRP1Q13795 201 aa2.89□□□□□ -1.95
HMGB3P6-201ENST00000444896 IL18Q14116 193 aa2.89□□□□□ -1.95
HMGB3P6-201ENST00000444896 FAM53BQ14153 422 aa2.89□□□□□ -1.95
HMGB3P6-201ENST00000444896 MPPED2Q15777 294 aa2.89□□□□□ -1.95
HMGB3P6-201ENST00000444896 NDUFA5Q16718 116 aa2.89□□□□□ -1.95
HMGB3P6-201ENST00000444896 ZNF791Q3KP31 576 aaPredicted RBP2.89□□□□□ -1.95
HMGB3P6-201ENST00000444896 TRMT12Q53H54 448 aaKnown RBP2.89□□□□□ -1.95
HMGB3P6-201ENST00000444896 CCNJQ5T5M9 372 aa2.89□□□□□ -1.95
HMGB3P6-201ENST00000444896 HBMQ6B0K9 141 aa2.89□□□□□ -1.95
HMGB3P6-201ENST00000444896 ULK3Q6PHR2 472 aa2.89□□□□□ -1.95
HMGB3P6-201ENST00000444896 CD200R1LQ6Q8B3 271 aa2.89□□□□□ -1.95
HMGB3P6-201ENST00000444896 ACP7Q6ZNF0 438 aa2.89□□□□□ -1.95
HMGB3P6-201ENST00000444896 RTL4Q6ZR62 310 aa2.89□□□□□ -1.95
HMGB3P6-201ENST00000444896 NCCRP1Q6ZVX7 275 aaPredicted RBP2.89□□□□□ -1.95
HMGB3P6-201ENST00000444896 OAFQ86UD1 273 aa2.89□□□□□ -1.95
HMGB3P6-201ENST00000444896 LHFPL3Q86UP9 236 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms